Protein Alignment Rpt6 and Katna1

DIOPT Version :9

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001004217.2
• Gene: Katna1 / 292464
• RGDID: 1303062
• Length: 493
• Species: Rattus norvegicus
• Alignment Length: 499
• Identity: 145/499 - (29%)
• Similarity: 231/499 - (46%)
• Gaps: 113/499 - (22%)

  Fly     1 MTVTNRMEIESAYHKGEGFRS---YY---IQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLR 59
            :.:|..:::...|.....:.|   ||   :.:|.:....|.:.|.: ::.|....|:|.:.:.::
  Rat     6 LMITENVKLAREYALLGNYDSAMVYYQGVLDQINKYLYSVKDTHLH-QKWQQVWQEINVEAKHVK 69

  Fly    60 EELQLLQ--------------EQGSYVGEVVK---PMDKKKV----------------------- 84
            |.::.|:              |..|..|||..   |::::.:
  Rat    70 EIMKTLESFKLDSTSLKAAQHELPSSEGEVWSLPVPVERRPLPGPRKRQSTQHSDPKPHSNRPGA 134

  Fly    85 LVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTY-- 147
            :|:.|......:..|:...:.......:...|.|.        ||:...|:.....|...:.|
  Rat   135 VVRAHRPSAQSLHSDRGKAVRSREKKEQSKGREEK--------NKLPAAVTEPEANKFDSTGYDK 191

  Fly   148 EMVGGLDKQI-------------------KEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPG 192
            ::|..|::.|                   |.::|.:.||:..||.|.  ||.:| ||||:.||||
  Rat   192 DLVEALERDIISQNPNVRWYDIADLVEAKKLLQEAVVLPMWMPEFFK--GIRRPWKGVLMVGPPG 254

  Fly   193 TGKTLLARAVAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGS 255
            |||||||:|||  |||  ||..||.|.|..|:.||..::||.||.|||.::|:.||:||||||.|
  Rat   255 TGKTLLAKAVA--TECKTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYSPATIFIDEIDSICS 317

  Fly   256 SRIESGSGGDSEV-QRTMLELLNQLDGF-------EATKNIKVIMATNRIDILDPALLRPGRIDR 312
            .|   |:..:.|. :|...|||.|:||.       :.:|.:.|:.|||....:|.||.|  |:::
  Rat   318 RR---GTSEEHEASRRVKAELLVQMDGVGGASENDDPSKMVMVLAATNFPWDIDEALRR--RLEK 377

  Fly   313 KIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER---- 373
            :|..|.|:.:.|.::|:|..|::.|...:||..|||.|.|.|||::..||.:|.:.|:|.|
  Rat   378 RIYIPLPSAKGREELLRISLRELELADDVNLASIAENMEGYSGADITNVCRDASLMAMRRRIEGL 442

  Fly   374 -----------RVHV--TQEDFEMAVAKVMQKDSEKNMSIKKLW 404
                       .:|:  |.||||||:.||.:..|..::...:.|
  Rat   443 TPEEIRNLSREEMHMPTTMEDFEMALKKVSKSVSAADIERYEKW 486

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	RPT1	17..403	CDD:224143	142/480 (30%)
		SlyX	<27..>69	CDD:294687	9/55 (16%)
		AAA_16	152..>205	CDD:289934	30/72 (42%)
		AAA	185..317	CDD:278434	66/141 (47%)
Katna1	NP_001004217.2	AAA	243..384	CDD:214640	70/147 (48%)
		AAA	247..383	CDD:278434	66/142 (46%)
		Vps4_C	<458..491	CDD:286426	11/29 (38%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	0	0.000	Not matched by this tool.
Domainoid	0	0.000	Not matched by this tool.
eggNOG	1	0.900	-	-		E1_COG0554
Hieranoid	0	0.000	Not matched by this tool.
Homologene	0	0.000	Not matched by this tool.
Inparanoid	0	0.000	Not matched by this tool.
OMA	0	0.000	Not matched by this tool.
OrthoDB	0	0.000	Not matched by this tool.
OrthoFinder	0	0.000	Not matched by this tool.
OrthoInspector	0	0.000	Not matched by this tool.
orthoMCL	0	0.000	Not matched by this tool.
Panther	0	0.000	Not matched by this tool.
Phylome	0	0.000	Not matched by this tool.
SonicParanoid	0	0.000	Not matched by this tool.
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	2	1.900