Protein Alignment Rpt6 and Psmc6

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001093979.1
• Gene: Psmc6 / 289990
• RGDID: 1308825
• Length: 403
• Species: Rattus norvegicus
• Alignment Length: 387
• Identity: 182/387 - (47%)
• Similarity: 252/387 - (65%)
• Gaps: 20/387 - (5%)

  Fly    28 EELQLVVAEKH----QNLRRLQAQRNELNAKVRMLRE--------------ELQLLQEQGSYVGE 74
            |...|::|:..    |:.|:...:..|::.:::.|||              :|:.||..|..|||
  Rat     9 ERRLLIMADPRDKALQDYRKKLLEHKEIDGRLKELREQLKELTKQYEKSENDLKALQSVGQIVGE 73

  Fly    75 VVKPMDKKKVLVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMV 139
            |:|.:.::|.:||.....::||...:.:|.:.:.|..||||...:.|:.:.||.:|||||..|..
  Rat    74 VLKQLTEEKFIVKATNGPRYVVGCRRQLDKSKLKPGTRVALDMTTLTIMRYLPREVDPLVYNMSH 138

  Fly   140 EKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAH 204
            |...:.:|..:|||.:||:|::||||||:.:||||..:||..|||.||||||||||||||||||.
  Rat   139 EDPGNVSYSEIGGLSEQIRELREVIELPLTNPELFQRVGIIPPKGCLLYGPPGTGKTLLARAVAS 203

  Fly   205 HTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQ 269
            ..:|.|::|..|.:|.|:|||.:|::||:|..||:|.|.||||||||:||..|...|:..|.|:|
  Rat   204 QLDCNFLKVVSSSIVDKYIGESARLIREMFNYARDHQPCIIFMDEIDAIGGRRFSEGTSADREIQ 268

  Fly   270 RTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRK 334
            ||::|||||:|||:....:|:||||||.|.||||||||||:||||....|||:|||||||||:..
  Rat   269 RTLMELLNQMDGFDTLHRVKMIMATNRPDTLDPALLRPGRLDRKIHIDLPNEQARLDILKIHAGP 333

  Fly   335 MNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEK 396
            :.....|:...|.:|..|.:||:::.|||||||:|:|.....|.||||..||.||  .||:|
  Rat   334 ITKHGEIDYEAIVKLSDGFNGADLRNVCTEAGMFAIRADHDFVVQEDFMKAVRKV--ADSKK 393

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	182/387 (47%)
Psmc6	NP_001093979.1	PRK03992	19..393	CDD:179699	178/375 (47%)