Protein Alignment Rpt6 and Katnal1

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001006957.1
• Gene: Katnal1 / 288449
• RGDID: 1359252
• Length: 488
• Species: Rattus norvegicus
• Alignment Length: 295
• Identity: 110/295 - (37%)
• Similarity: 167/295 - (56%)
• Gaps: 37/295 - (12%)

  Fly   138 MVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQP-KGVLLYGPPGTGKTLLARA 201
            :|.:.|...::.:..|::..|.::|.:.||:..|:.|.  ||.:| ||||:.||||||||:||:|
  Rat   196 IVSRNPSIHWDDIADLEEAKKLLREAVVLPMWMPDFFK--GIRRPWKGVLMVGPPGTGKTMLAKA 258

  Fly   202 VAHHTEC--TFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGG 264
            ||  |||  ||..||.|.|..|:.||..::||.||.|||.:||:.||:||||||.|.|   |:..
  Rat   259 VA--TECGTTFFNVSSSTLTSKYRGESEKLVRLLFEMARFYAPTTIFIDEIDSICSRR---GTSD 318

  Fly   265 DSEV-QRTMLELLNQLDGF-------EATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNE 321
            :.|. :|...|||.|:||.       :.:|.:.|:.|||....:|.||.|  |::::|..|.|..
  Rat   319 EHEASRRVKSELLIQMDGVGGALENDDPSKMVMVLAATNFPWDIDEALRR--RLEKRIYIPLPTA 381

  Fly   322 EARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTEAGMYALRER------------- 373
            :.|.::|||..|::.|...|:|..|||...|.|||::..:|.:|.:.|:|.|
  Rat   382 KGRAELLKISLREVELDPDIHLEDIAEKTEGYSGADITNICRDASLMAMRRRINGLSPEEIRALS 446

  Fly   374 ----RVHVTQEDFEMAVAKVMQKDSEKNMSIKKLW 404
                ::.||:.|.|:|:.|:.:..|..::...:.|
  Rat   447 KEELQMPVTRGDLELALKKIAKSVSAADLEKYEKW 481

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	109/288 (38%)
Katnal1	NP_001006957.1	Kp60-NTD	4..72	CDD:439297
		SpoVK	52..452	CDD:440232	102/264 (39%)
		Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite	128..179
		RecA-like_KTNA1	207..376	CDD:410930	78/177 (44%)
		Vps4_C	<448..486	CDD:462762	8/34 (24%)