Protein Alignment Rpt6 and yta12

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_596797.1
• Gene: yta12 / 2541079
• PomBaseID: SPBC543.09
• Length: 773
• Species: Schizosaccharomyces pombe
• Alignment Length: 260
• Identity: 108/260 - (41%)
• Similarity: 159/260 - (61%)
• Gaps: 13/260 - (5%)

  Fly   150 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 214
            |.|:|:..:||.|.::. :|:|:.::.||...|:|.:|.|||||||||||:|.|......|:.||
pombe   298 VAGVDEAKEEIMEFVKF-LKNPKFYERLGAKIPRGAILSGPPGTGKTLLAKATAGEANVPFLSVS 361

  Fly   215 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGS-GGDSEVQRTMLELLNQ 278
            |||.::.|:|.|...||:||..||::||.|||:||||:||.:|...|. |.:.|.:.|:.:||.:
pombe   362 GSEFLEMFVGVGPSRVRDLFATARKNAPCIIFIDEIDAIGKARGRGGQFGSNDERESTLNQLLVE 426

  Fly   279 LDGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINL 343
            :|||.::::|.|...|||.|:||||||||||.||:|....|:...|..|.|:|.:.:.....|:|
pombe   427 MDGFTSSEHIVVFAGTNRPDVLDPALLRPGRFDRQITIDRPDIGGREQIFKVHLKHIKAADNIDL 491

  Fly   344 --RKIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKV---MQKDS------EKN 397
              :::|.|..|.:||::..||.|..:.|.|.....|....||.|:.:|   ::|.|      |||
pombe   492 IAKRLAVLTSGFTGADIMNVCNEGALIAARSNSNEVQMVHFEQAIERVTAGLEKKSRVLSPEEKN 556

  Fly   398  397
            pombe   557  556

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	108/260 (42%)
yta12	NP_596797.1	HflB	140..734	CDD:440233	108/260 (42%)