Protein Alignment Rpt6 and shpk-1

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001366916.1
• Gene: shpk-1 / 188886
• WormBaseID: WBGene00012017
• Length: 430
• Species: Caenorhabditis elegans
• Alignment Length: 308
• Identity: 58/308 - (18%)
• Similarity: 95/308 - (30%)
• Gaps: 133/308 - (43%)

  Fly   191 PGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHAPSII---------- 245
            ||.|...||          |:..|..|.:..||..|:  :.:||:......|..:
 Worm   131 PGFGLVTLA----------FLNYSNPEFLTNFIHCGT--IMDLFISILTQNPDPLISHHNAHSWG 183

  Fly   246 -----------FMD------EIDSIGSSRIESGS--GGDSEVQRTMLEL-LNQLDGFEAT----- 285
                       .:|      ::..|.||...||:  |....|....|:. :..||.:|.|
 Worm   184 YCTENATWQSEILDFLPKTLKLPDINSSSEVSGTWHGAKCHVASGDLQASVASLDYYENTAYVIL 248

  Fly   286 --------------KNIKVIMAT--------------------------------------NRI- 297
                          ||..||.||                                      ||:
 Worm   249 GTSAQLCCLIQTSEKNATVIPATVVRLPFSTSKTLVAACAMNGGNALEATLKMNSPEVYSSNRLQ 313

  Fly   298 DILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGIN-----------------LRK 345
            ::|:       ::|:.....|||  .|:|.:.|..|..:.|..|:                 :|.
 Worm   314 ELLN-------QLDKSAPAMPPN--LRIDPIFIPERGSSKTFSISGTSDDPLQLLEATHQGIIRN 369

  Fly   346 IAEL--MPGASGAEVKGVCTEAGMYALRERRVHVTQ----EDFEMAVA 387
            :.||  :|.....:::.|.......:.|.|| |:.:    .:||:.|:
 Worm   370 LFELFPIPLLKSLKIRRVALVGSAQSPRFRR-HLEEACGSNNFELLVS 416

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	58/308 (19%)
shpk-1	NP_001366916.1	ASKHA_NBD_FGGY_SHK	5..430	CDD:466796	58/308 (19%)