Protein Alignment Rpt6 and F56F11.4

DIOPT Version :9

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: NP_001367906.1
• Gene: F56F11.4 / 175403
• WormBaseID: WBGene00018991
• Length: 432
• Species: Caenorhabditis elegans
• Alignment Length: 386
• Identity: 314/386 - (81%)
• Similarity: 346/386 - (89%)
• Gaps: 0/386 - (0%)

  Fly    20 RSYYIQKIEELQLVVAEKHQNLRRLQAQRNELNAKVRMLREELQLLQEQGSYVGEVVKPMDKKKV 84
            |.|:..|:|:.:..||||..|:|||.||:.|||.|||:|:||:..|.||||:||||.|.||||||
 Worm    47 RPYFKTKVEQAEQTVAEKSINVRRLMAQQKELNGKVRLLKEEISHLHEQGSHVGEVCKAMDKKKV 111

  Fly    85 LVKVHPEGKFVVDLDKNIDINDVTPNCRVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEM 149
            |||.||:||::||:..::||:.:....|||||.::|.:|::||:|||||||||||||||||||||
 Worm   112 LVKNHPDGKYIVDVAASVDISTLAAGTRVALRADNYAIHEVLPSKVDPLVSLMMVEKVPDSTYEM 176

  Fly   150 VGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 214
            |||||.|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
 Worm   177 VGGLDTQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVS 241

  Fly   215 GSELVQKFIGEGSRMVRELFVMAREHAPSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQL 279
            ||||||||||||:||||||||||||||||||||||||||||||:|...|||||||||||||||||
 Worm   242 GSELVQKFIGEGARMVRELFVMAREHAPSIIFMDEIDSIGSSRVEGSRGGDSEVQRTMLELLNQL 306

  Fly   280 DGFEATKNIKVIMATNRIDILDPALLRPGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLR 344
            ||||||||||||||||||||||.|||||||||||||||.|:|:||..|||||||||||.|||.:.
 Worm   307 DGFEATKNIKVIMATNRIDILDSALLRPGRIDRKIEFPAPDEKARAQILKIHSRKMNLMRGIRMD 371

  Fly   345 KIAELMPGASGAEVKGVCTEAGMYALRERRVHVTQEDFEMAVAKVMQKDSEKNMSIKKLWK 405
            ||||.:|||||||||.|||||||:||||||:|||||||||||.||||||||||||||||||
 Worm   372 KIAEQIPGASGAEVKSVCTEAGMFALRERRIHVTQEDFEMAVGKVMQKDSEKNMSIKKLWK 432

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	RPT1	17..403	CDD:224143	310/382 (81%)
		SlyX	<27..>69	CDD:294687	22/41 (54%)
		AAA_16	152..>205	CDD:289934	51/52 (98%)
		AAA	185..317	CDD:278434	125/131 (95%)
F56F11.4	NP_001367906.1	RPT1	51..430	CDD:224143	308/378 (81%)

Information from Original Tools

Tool	Simple Score	Weighted Score	Original Tool Information
			BLAST Result	Score	Score Type	Cluster ID
Compara	1	0.930	-	-		C160158477
Domainoid	1	1.000	79	1.000	Domainoid score	I5608
eggNOG	0	0.000	Not matched by this tool.
Hieranoid	1	1.000	-	-
Homologene	1	1.000	-	-		H2098
Inparanoid	1	1.050	665	1.000	Inparanoid score	I392
Isobase	1	0.950	-	0	Normalized mean entropy	S42
OMA	1	1.010	-	-		QHG53670
OrthoDB	1	1.010	-	-		D298123at33208
OrthoFinder	1	1.000	-	-		FOG0003106
OrthoInspector	1	1.000	-	-		otm14264
orthoMCL	1	0.900	-	-		OOG6_101513
Panther	1	1.100	-	-	O	PTHR23073
Phylome	1	0.910	-	-
RoundUp	0	0.000	Not matched by this tool.
SonicParanoid	1	1.000	-	-		X2077
SwiftOrtho	1	1.000	-	-
TreeFam	0	0.000	Not matched by this tool.
	15	14.860