DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and R11F4.1

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:NP_494721.1 Gene:R11F4.1 / 173747 WormBaseID:WBGene00020007 Length:502 Species:Caenorhabditis elegans


Alignment Length:89 Identity:21/89 - (23%)
Similarity:30/89 - (33%) Gaps:23/89 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   118 ESYTLHKI-----LPN----KVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPEL 173
            |..|.|:|     .|:    ::||:.....|......|.|.:..|.....|||.|          
 Worm    25 ELVTSHQIEVRQLFPHGGWVEMDPMELYDTVVSCISKTIEKLENLGISADEIKSV---------- 79

  Fly   174 FDALGIAQPKGVLLYGPPGTGKTL 197
                |:|..:...:.....|||.|
 Worm    80 ----GVANQRETSIVWDKETGKPL 99

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 21/89 (24%)
R11F4.1NP_494721.1 ASKHA_NBD_FGGY_GK1-3-like 3..497 CDD:466802 21/89 (24%)

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