DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and LOC1273891

DIOPT Version :10

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_312924.4 Gene:LOC1273891 / 1273891 -ID:- Length:438 Species:Anopheles gambiae


Alignment Length:209 Identity:45/209 - (21%)
Similarity:84/209 - (40%) Gaps:54/209 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly   249 CQKLELDNE----EKAQKIKILENERLKLVDFKKKWKSVNDDLQEANCKIEKLQNLVGIEKKYRE 309
            |.::..|.|    |.|..:|.:.|      :.|..|.|.|:  .:.|   |..:.|..||.:.:|
Mosquito    26 CPRMSTDKEVCLVELAPVLKYISN------NHKSHWNSANE--VQVN---ETRKQLAKIEGQEKE 79

  Fly   310 ARDGKELYKSKYDIVVKKNLEME-ETITTLEKNLKTLQMEMKEKFGVEDNLQRMRNTID-DLEAE 372
            ..|     |.|   |:..|::.| ..::...||:|.:|..:.   .:|..||..:..:: .:||:
Mosquito    80 TND-----KIK---VIHDNVDNEFNALSAKIKNVKNIQRHLA---SLELQLQETKKALNLSVEAK 133

  Fly   373 ISKKNLEIED----------FLDEKHRMDREIKELKEIVHQMEVPSTTTTPRIMDSLADQLENAK 427
            ......||..          |:::||::|  ..:...:.|:|.              |..|....
Mosquito   134 KVMPKTEIPSQFQKIGWRHFFIEKKHKVD--WFKATSMCHKMG--------------AHLLTIQS 182

  Fly   428 QDEFEMMKAEIRKL 441
            :||.:.::.|::.:
Mosquito   183 EDELDAIRTELKDI 196

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 PRK03992 23..399 CDD:179699 38/165 (23%)
LOC1273891XP_312924.4 PTZ00361 1..438 CDD:185575 45/209 (22%)

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