Protein Alignment Rpt6 and Psmc4

DIOPT Version :10

• Sequence 1: NP_608447.1
• Gene: Rpt6 / 33105
• FlyBaseID: FBgn0020369
• Length: 405
• Species: Drosophila melanogaster
• Sequence 2: XP_063123979.1
• Gene: Psmc4 / 117262
• RGDID: 621102
• Length: 442
• Species: Rattus norvegicus
• Alignment Length: 383
• Identity: 154/383 - (40%)
• Similarity: 225/383 - (58%)
• Gaps: 47/383 - (12%)

  Fly    27 IEELQLVVAEKHQNLRRLQAQR---------------NELNAKVRMLREELQLLQEQGSYVGEVV 76
            :||:.::|.:....:..|...|               .:|.::.:.|::||:.|:.|..|:.:..
  Rat     1 MEEIGILVEKIQDEIPALSVSRPQTGLSFLGPEPEDLEDLYSRYKKLQQELEFLEVQEEYIKDEQ 65

  Fly    77 KPMDKKKVLVKVHPE-----------GKFVVDLDKN-------------------IDINDVTPNC 111
            |.:  ||..:....|           |:|:..:|:|                   ||...:.||.
  Rat    66 KNL--KKEFLHAQEEVKRIQSIPLVIGQFLEAVDQNTAIVGSTTGSNYYVRILSTIDRELLKPNA 128

  Fly   112 RVALRNESYTLHKILPNKVDPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDA 176
            .|||...|..|..:||.:.|..:.::..::.||..|..:||:|.|.:|::|.:|||:.|.||:..
  Rat   129 SVALHKHSNALVDVLPPEADSSIMMLTSDQKPDVMYADIGGMDIQKQEVREAVELPLTHFELYKQ 193

  Fly   177 LGIAQPKGVLLYGPPGTGKTLLARAVAHHTECTFIRVSGSELVQKFIGEGSRMVRELFVMAREHA 241
            :||..|:|||:|||||.|||:||:||||||...||||.|||.|||::|||.||||::|.:|:|:|
  Rat   194 IGIDPPRGVLMYGPPGCGKTMLAKAVAHHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENA 258

  Fly   242 PSIIFMDEIDSIGSSRIESGSGGDSEVQRTMLELLNQLDGFEATKNIKVIMATNRIDILDPALLR 306
            |:|||:||||:|.:.|.::.:|.|.||||.:||||||:|||:...|:||||||||.|.|||||||
  Rat   259 PAIIFIDEIDAIATKRFDAQTGADREVQRILLELLNQMDGFDQNVNVKVIMATNRADTLDPALLR 323

  Fly   307 PGRIDRKIEFPPPNEEARLDILKIHSRKMNLTRGINLRKIAELMPGASGAEVKGVCTE 364
            |||:|||||||.|:...:..|....:.||||:..::|..........|||::..:|.|
  Rat   324 PGRLDRKIEFPLPDRRQKRLIFSTITSKMNLSEEVDLEDYVARPDKISGADINSICQE 381

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Rpt6	NP_608447.1	PRK03992	23..399	CDD:179699	154/383 (40%)
Psmc4	XP_063123979.1	None