DRSC/TRiP Functional Genomics Resources

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Protein Alignment Rpt6 and zgc:172295

DIOPT Version :9

Sequence 1:NP_608447.1 Gene:Rpt6 / 33105 FlyBaseID:FBgn0020369 Length:405 Species:Drosophila melanogaster
Sequence 2:XP_009289955.1 Gene:zgc:172295 / 100136866 ZFINID:ZDB-GENE-080204-72 Length:570 Species:Danio rerio


Alignment Length:104 Identity:23/104 - (22%)
Similarity:37/104 - (35%) Gaps:21/104 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly   131 DPLVSLMMVEKVPDSTYEMVGGLDKQIKEIKEVIELPVKHPELFDALGIAQPKGVLLYGPPGTGK 195
            ||...|..|.:..|.|.|.:..|:..:..||              |:|:...:...|.....||:
Zfish    61 DPKEILQSVYECMDRTCEKLTQLNIDVSNIK--------------AVGVTNQRETTLVWDKQTGE 111

  Fly   196 TLLARAV--AHHTECTFIRVSGSELVQKFIGEGSRMVRE 232
            .|....|  ...|:.|..|     |:.|..|:....:::
Zfish   112 PLYNAIVWLDLRTQSTVER-----LINKTPGKNKNHLKD 145

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Rpt6NP_608447.1 RPT1 17..403 CDD:224143 23/104 (22%)
SlyX <27..>69 CDD:294687
AAA_16 152..>205 CDD:289934 10/54 (19%)
AAA 185..317 CDD:278434 11/50 (22%)
zgc:172295XP_009289955.1 glycerol_kin 16..526 CDD:273549 23/104 (22%)
FGGY_GK1-3_metazoa 16..526 CDD:212664 23/104 (22%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E1_COG0554
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
10.900

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