DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and ABCA9

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_001330984.1 Gene:ABCA9 / 836295 AraportID:AT5G61730 Length:950 Species:Arabidopsis thaliana


Alignment Length:969 Identity:202/969 - (20%)
Similarity:344/969 - (35%) Gaps:291/969 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly   837 LTKQRMRAMFYKKMIHTAPNVW-----PIIMIFTSFVLIAIIARL---SVLLDMPKERQNSIHIG 893
            |..|:..|:|.|.::.:    |     ..:.:|:||..|.:|..:   |...|:...|    |..
plant     9 LFHQQFTALFKKNLLLS----WRNKRATCLHLFSSFFFILLIFSIEESSKASDLTSTR----HKN 65

  Fly   894 FREPEDVV---------KYLPNLKDCGYI----------DIRSAVKVNKKKSVGVSRTFDDDSFV 939
            ..:|:.:|         |:...|....::          ||.||:..|..     .|..      
plant    66 VTDPKALVSLPILPCEDKFFVRLPCFDFVWSGNQSRRVTDIVSAIMANNP-----GRPI------ 119

  Fly   940 CEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYISQDMFHSAPM--MLNLLQNVILRLSYPMQTD 1002
                       ..|:::||     ...|.::.:.   |.|.:.:  .|:.::.....:||.:||:
plant   120 -----------PTNKVQSF-----TKPEEVDAWF---MSHPSQVTGALHFVEKNATVISYGIQTN 165

  Fly  1003 --------------LVVLVENHPLPTQLSQKINVLDNKIAH----------------------IH 1031
                          ...||     |.|::.:..:..:.|..                      |.
plant   166 SSSEKKRGRREDPTFKFLV-----PLQIAAEREIARSLIGDPKFSWDFGFKEFARPAIGGEVIIS 225

  Fly  1032 VPLVVGCIIPLTVSV--FVIPL---VEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVI 1091
            ...::|.:..|..|:  ||:.|   |.|:...:|......|:....:|...|.|:....||.|:.
plant   226 AFYLMGPVFFLAFSMFGFVLQLGSVVTEKELKLREAMTTMGVYESAYWLSWLIWEGILTFVSSLF 290

  Fly  1092 IVVIMSLMGIGGFG-------FYENAIMVVLLT--TFGLAALPLTYLVSMFVNKSI------VRA 1141
            :|:         ||       |.:|:.::|.|.  .|....:.|.:.:|..::||.      ...
plant   291 LVL---------FGMMFQFEFFLKNSFVLVFLLFFLFQFNMIGLAFALSSIISKSSSATTVGFLV 346

  Fly  1142 FLVSVLLQGV--SGLVLYIIY-------WDVANSNTI-----FFYAACMSPGFSLLDGVSNVYAQ 1192
            |||..:.|.|  :|......|       |.:...||.     ....|..|||.|   |:|     
plant   347 FLVGFITQIVTTAGFPYSSAYSIGSRVIWSLFPPNTFSAGLQLLLEATSSPGDS---GIS----- 403

  Fly  1193 NLEQAICIDKCEATDSCTEENMNEVVPNCKF-----DTFFKW------------AAPGILPPILY 1240
            ..|:|||   .....:|       |:...|.     .|||.|            .|.|:...|.|
plant   404 WSERAIC---AGGESTC-------VITTNKIYIWLVGTFFFWFVLALYFDNIIPNASGVRKSIFY 458

  Fly  1241 MVLSALIFLMLIFWIELHRREKKFHTSRDLRKMRTATYPFDDGDVADVKQKIAEADNTKAKQSVF 1305
                   ||...:|           |.::..|:...:.....|.|..|:....|.::...::.:.
plant   459 -------FLKPSYW-----------TGKEGNKVEEGSICSCIGSVPPVEHITPEDEDVLEEEILV 505

  Fly  1306 LVDQVEARV-PAAGKRIH-------------------TVSFALNKYMSMGI--------FGPRNS 1342
            ....::.|| |....:||                   |..|...|.:.|.|        .||..:
plant   506 KQQAMDGRVDPNIAVQIHGLAKTYPGTTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGA 570

  Fly  1343 GKSHLMRQLVGQRGFAFGE--IYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMI 1405
            ||:..:..|.|......|:  ||...:.....:.:|...:|..||...|.:.|:..||:.|...|
plant   571 GKTTTISCLTGINPVTGGDAKIYGNSIRSSVGMSNIRKMIGVCPQFDILWDALSSEEHLHLFASI 635

  Fly  1406 RGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPAT 1470
            :|:|.:.|......|.:.:.:||....:....:...:.:|.:|:||:...|::.|||||.||...
plant   636 KGLPPSSIKSIAEKLLVDVKLTGSAKIRAGSYSGGMKRRLSVAIALIGDPKLVFLDEPTTGMDPI 700

  Fly  1471 TRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEV 1535
            |||.:|:|::..:. |:.||..|:...|..||:|.|.:.....:..||:...|:.::..||...|
plant   701 TRRHVWDIIQESKK-GRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATV 764

  Fly  1536 RLI---RDGA------------TLAESEENLRKDVENLAKFVNFL--HNRSELVGRLNNWFKFYV 1583
            ..|   :|||            .:..:|||        ..|:.|:  |::.:|   |..:|.   
plant   765 SFIENKKDGAPEPLKRFFKERLKVEPTEEN--------KAFMTFVIPHDKEQL---LKGFFA--- 815

  Fly  1584 PVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQET------RAQLKHHLVQ 1636
                             :|:...|::.|  ||:...:|.::|.      ||:|:...|:
plant   816 -----------------ELQDRESEFGI--ADIQLGLATLEEVFLNIARRAELESATVE 855

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468
ABC2_membrane_4 <293..448 CDD:289500
EcfA2 499..717 CDD:224047
P-loop_NTPase 500..721 CDD:304359
ABC2_membrane_3 <972..1254 CDD:289468 75/370 (20%)
EcfA2 1307..1521 CDD:224047 63/243 (26%)
P-loop_NTPase 1324..1524 CDD:304359 57/209 (27%)
ABCA9NP_001330984.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.920

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