DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and ABCA11

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_001332171.1 Gene:ABCA11 / 836291 AraportID:AT5G61690 Length:953 Species:Arabidopsis thaliana


Alignment Length:955 Identity:194/955 - (20%)
Similarity:336/955 - (35%) Gaps:249/955 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly   837 LTKQRMRAMFYKKMIHTAPNVW-----PIIMIFTSFVLIAIIARLSVLLDMPKERQNSIHIGFRE 896
            |..|:..|:|.|.::.:    |     ..:.||:||..|.:|..:...: ...:..:|.:....:
plant     9 LLYQQFTALFGKNLLLS----WRNKRATCLQIFSSFFFILLIFCIEEAM-KASDASSSAYKNITD 68

  Fly   897 PEDVVKYLPNLKDCGYIDIRSAVKVNKKKSVGVSRTFDDDSFVCEKGSY-----RNNLRK----- 951
            |..:|.  |.:..|                        :|.|..:...|     .||.|:     
plant    69 PTLLVS--PPILPC------------------------EDKFFVKLPCYDFVWSGNNSRRVTDIV 107

  Fly   952 -------------KNELRSFGAVESDGDEHLNGYISQDMFHSAPMMLNLLQNVILRLSYPMQTD- 1002
                         .|:::||    .:.||.....:|..:  ..|..|:.::.....:||.:||: 
plant   108 SAIMANNPGRPIPTNKVQSF----KEPDEVDTWLLSHPL--QVPGALHFVERNASVISYGVQTNS 166

  Fly  1003 -------------------LVVLVENH--------------------PLPTQLSQKINVLDNKIA 1028
                               |.|..|..                    ..|..:::..:.|.    
plant   167 SSESKRGQTEDPTFKFLVPLQVAAEREIARSLLGDPNFGWGLGFKEFARPAIITETTSALS---- 227

  Fly  1029 HIHVPLVVGCIIPLTVSVF-----VIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVY 1088
                  |:|.:..|..|:|     :..||.|:...:|....|.|:....:|...|.|:.....|.
plant   228 ------VMGPVFFLAFSMFGFVLQLGALVTEKELKLRQAMTMMGVYDSAYWLSWLTWEGILTLVS 286

  Fly  1089 SVIIVVIMSLMG-IGGFGFY-ENAIMVV--LLTTFGLAALPLTYLVSMFVNKSI------VRAFL 1143
            |:.:|    |.| |..|.|: :|:.::|  |...|....:.|.:.:|..::||.      ...||
plant   287 SLFLV----LFGMIFRFDFFLKNSFVLVFLLFLLFQFNMIGLAFALSSIISKSSSATTVGFLVFL 347

  Fly  1144 VSVLLQGVSG---------LVLYIIYWDVANSNTIFFYAACMSPGFS-LLDGVSNVYAQNL---E 1195
            :..:.|.||.         .|...:.|.:...||       .|.|.. |||..|...:..:   .
plant   348 IGFITQFVSATGFPYSSSYAVSRRVMWSLFPPNT-------FSAGLKLLLDATSTPKSSGISWSN 405

  Fly  1196 QAICIDKCEATDSCTEENMNEVVPNCKFDTFFKW------------AAPGILPPILYMVLSALIF 1248
            :|:    ||...:....::| ::......||..|            .|.|:..||.|       |
plant   406 RAV----CEGGQATCVISIN-IIYQWLLGTFLFWFVLAIYFDNIIPNASGVRKPIFY-------F 458

  Fly  1249 LMLIFWIELHRREKKFHTSRDLRKMR-------TATYPFDDGDVADVKQKIAEADNTKAKQSVFL 1306
            |...:|           |.:...|:.       ..:.|..:.:..:.|..:.|....|.:....:
plant   459 LAPGYW-----------TGKGGNKVEEGSIFSCVGSVPLVEHNTPNDKDVLEEETEVKQQAMDGI 512

  Fly  1307 VDQVEARVPAAGKRIH-------------------TVSFALNKYMSMGI--------FGPRNSGK 1344
            .|      |....:||                   |..|...|.:.|.|        .||..:||
plant   513 AD------PNIAVQIHGLAKTYPGTTKLGCCKCTKTSPFHAVKGLWMNIAKDQLFCLLGPNGAGK 571

  Fly  1345 SHLMRQLVGQRGFAFGE--IYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRG 1407
            :..:..|.|......|:  ||...:.....:.:|...:|..||...|.:.|:..:|:.|...|:|
plant   572 TTTISCLTGINPVTGGDALIYGDSIRSSVGISNIRKMIGVCPQFDILWDALSSEQHLHLFASIKG 636

  Fly  1408 VPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTR 1472
            :|.|.|......|...:.:||....:....:...:.:|.:|:||:...|::.|||||.||...||
plant   637 LPPASIKSTAEKLLADVKLTGAAKVRAGSYSGGMKRRLSVAVALIGDPKLVFLDEPTTGMDPITR 701

  Fly  1473 REIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRL 1537
            |.:|:|::..:. |:.||..|:...|..||:|.|.:.....:..||:...|:.::..||...|..
plant   702 RHVWDIIQESKK-GRAIILTTHSMEEADILSDRIGIMAKGRLRCIGTSIRLKSRFGTGFVATVSF 765

  Fly  1538 IRDGATLAESEENLRKDV--ENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHIVYSFLYGAMEKN 1600
            |.:     :::.|:....  |.|.||.. .|.:.|.......:..|.:|  |...:.|.|..|:.
plant   766 IEN-----KNDNNIGVGASHEPLKKFFK-EHLKVEPTEENKAFMTFVIP--HDKENLLTGFFEEL 822

  Fly  1601 KLR---LNVSDYCIYQADM----MSVVAQVQETRAQLKHHLVQTE 1638
            :.|   ..:||..:..|.:    :::..|.:...|..:.::|..|
plant   823 QNRESEFGISDIQLGLATLEEVFLNIARQAELESATAEGNMVTLE 867

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468
ABC2_membrane_4 <293..448 CDD:289500
EcfA2 499..717 CDD:224047
P-loop_NTPase 500..721 CDD:304359
ABC2_membrane_3 <972..1254 CDD:289468 71/361 (20%)
EcfA2 1307..1521 CDD:224047 62/242 (26%)
P-loop_NTPase 1324..1524 CDD:304359 57/209 (27%)
ABCA11NP_001332171.1 None
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.920

Return to query results.
Submit another query.