Sequence 1: | NP_728408.3 | Gene: | CG1801 / 33104 | FlyBaseID: | FBgn0031171 | Length: | 1655 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_006233707.2 | Gene: | Abca2 / 79248 | RGDID: | 620238 | Length: | 2435 | Species: | Rattus norvegicus |
Alignment Length: | 1963 | Identity: | 370/1963 - (18%) |
---|---|---|---|
Similarity: | 697/1963 - (35%) | Gaps: | 555/1963 - (28%) |
- Green bases have known domain annotations that are detailed below.
Fly 95 FTSEVTKNVAKTL-ELSSTVGYESESEMQNQFDERTTLAGIVFNDLRDDGTPLTLSISIRFPSEF 158
Fly 159 RTIAPFLTEDRLWITRCSGRINP---GRDRAKHDKQQDIYIREGFLQLQHQIFVEWYHQLRKDIV 220
Fly 221 STYPEPNVEVYNILLKAADEPCSVMSVAQLPTFLYNFIYLLPFLNI----------IRNVAAQVE 275
Fly 276 DGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIML-----------LAFWGFGGREGEFS 329
Fly 330 GTGTIAFVCFITLYTVEIIITGMVVAKLF-----ANPTNAVLFALMLWLFMYAAF---------- 379
Fly 380 ----CI----------ILERYWDIHKYYVFFILVAFCNCQMH-FSMSLFRNCIEKPEMVNTIDFV 429
Fly 430 LIFTSAISSALIYFLILLAIQWRMPGTFLSRRIVNNRPRK------------QQESDT------- 475
Fly 476 ------TIMYLGRAPSFQNFEFGDVGSVE--------LMRLRHVSTSHRDSERKILKNISMRIYR 526
Fly 527 GEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEPN-GEARRLVDFRFDEHGLNKHLTV 590
Fly 591 EQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVES-RGVRIGKLSSGSMKLVALCCCLAGDTP 654
Fly 655 IIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFF 719
Fly 720 LRSKFSSSVDLVIIKKPHVP----------------------DQPITDYINQFMQNIEPENEIGD 762
Fly 763 SLTYRLP--VIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSDIYMTLVTSFRLQQQMIPDVTQ 825
Fly 826 TFKYQVVSQKQLT---------------------------------------------------- 838
Fly 839 -----------------------KQRMRAMFYK---------KMIHTAPN----VWPIIMIFTSF 867
Fly 868 VLIAIIARLSV--LLDMP-------------KERQNSIHIGFRE-------------PEDVVK-- 902
Fly 903 YLPN-------LKDCGYIDIRSAVKVNKKKSVGVSRTF--------------------------- 933
Fly 934 -------DDDS-----------------------------------------FVCEK--GSYRNN 948
Fly 949 LR-----------------------KKNELRSFGAVESDGDEHLNGYISQDM------------- 977
Fly 978 ----------------FHSAPMMLNLLQNVILRLSYPMQ----TDLVVLVENHPLPTQLSQKINV 1022
Fly 1023 LDNKIAHIHVPLVVGCIIPLTV--SVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTF 1085
Fly 1086 FVYSVIIVVIMSLMGIGGFGFYENAIMVV-LLTTFGLAALPLTYLVSM-FVNKSIVRAFLVSV-L 1147
Fly 1148 LQGVSGLV----LYIIYWD----VANSNTIFFYAAC--MSPGFSLLDGVSNVYAQNLEQAICIDK 1202
Fly 1203 CEATDSCTEENMNEVVPNC-KFDTF---FKWAAPGILPPILYMVLSALIFLMLIFWIELHRREKK 1263
Fly 1264 FHTSRDLRKMRTATYPF-DDGDVADVKQKI--AEADNTKAK----QSVFLVDQVEARVPAAGKRI 1321
Fly 1322 HTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQH 1386
Fly 1387 RGLLNELTPREHIRLLCMIRGVP---EAKIG----EKMHDLCLMLNMTGWMHRKCSLLTAEKRHK 1444
Fly 1445 LKIALALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILF 1509
Fly 1510 QDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGR 1574
Fly 1575 LNNWFKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQLKHHLVQTEG 1639
Fly 1640 -----PLPLDTTS 1647 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1801 | NP_728408.3 | ABC2_membrane_3 | <246..379 | CDD:289468 | 25/158 (16%) |
ABC2_membrane_4 | <293..448 | CDD:289500 | 33/195 (17%) | ||
EcfA2 | 499..717 | CDD:224047 | 59/219 (27%) | ||
P-loop_NTPase | 500..721 | CDD:304359 | 61/222 (27%) | ||
ABC2_membrane_3 | <972..1254 | CDD:289468 | 69/333 (21%) | ||
EcfA2 | 1307..1521 | CDD:224047 | 57/220 (26%) | ||
P-loop_NTPase | 1324..1524 | CDD:304359 | 56/206 (27%) | ||
Abca2 | XP_006233707.2 | rim_protein | 1..2369 | CDD:130324 | 364/1942 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342253 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 0 | 0.000 | Not matched by this tool. | |||
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.750 |