Sequence 1: | NP_728408.3 | Gene: | CG1801 / 33104 | FlyBaseID: | FBgn0031171 | Length: | 1655 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296394.1 | Gene: | abca1a / 558924 | ZFINID: | ZDB-GENE-031006-12 | Length: | 2268 | Species: | Danio rerio |
Alignment Length: | 1995 | Identity: | 397/1995 - (19%) |
---|---|---|---|
Similarity: | 709/1995 - (35%) | Gaps: | 597/1995 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 49 LYTTTENENEQSIVSHKLQDINILTRMADSKREKTKYIL-------------------AFTPETT 94
Fly 95 F--TSEVTKNVAKTLE---LSSTVGYESESEMQNQ----FDERTTLAGIVFNDLRDDGTPLTLSI 150
Fly 151 SIRFPSEFRTI-APFLTEDRLWITRCSGRINPGRDRAKHDKQQDI-YIREGFLQLQHQIFVEWYH 213
Fly 214 QLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSV------AQLPTFLYNFIYLLPFLNIIRNVAA 272
Fly 273 QVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFV 337
Fly 338 CFITLYTVEIIITGMVVAKLFANPTNAVLFALMLWLFMYAAF--CIILERYWDIHKYYVFFIL-- 398
Fly 399 VAF-CNCQMHFSMSLFR---------NCIEKPEMVNTIDFVLIFTSAISSALIYFLILLAIQWRM 453
Fly 454 PGTFLSRRIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGDVGSVELMRLRHVST-------SHRD 511
Fly 512 ------SERKILKN-------ISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGN 563
Fly 564 PFEPNGEARRLVDFRFDEHGLNKH-------------LTVEQTIDYHVRLKLSPSESDRYEIERR 615
Fly 616 KWLAILDQHV-ESRGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHA 679
Fly 680 EKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKK--------- 735
Fly 736 --------------------------------------------------PHVPDQPITDYINQF 750
Fly 751 MQNIEPENEIGDSLTYRLPVIYRPRLQKLLIHL--EIDRKM--LGIENVRVVGAELSDIYMTLVT 811
Fly 812 ---------------------SFRLQQQMI----------------PDVTQT---------FKYQ 830
Fly 831 VVSQKQLTKQRMRAMFYKKMIHT--------APNVWPIIMIFTSFVLIAIIARL---------SV 878
Fly 879 LLDMPKERQNSIHIGFREPED--VVKYLPNLKDC-GYIDIRSAVKVNKKKSVGV----------- 929
Fly 930 ----------SRTFDDDSFVCE---KG-------------------------------SYRN--- 947
Fly 948 ------------NLRKK---NELR----SFGAVESD----GDE------HLNGYIS------QDM 977
Fly 978 F--------------------------HSAPMMLNLLQNVILRLSYPMQTD---LVVLVENHPLP 1013
Fly 1014 TQLSQKINVLDNKIAHIHV------PLVVGCII---PLTVSVFVIPLVEEEIYDVRFLQHMAGLG 1069
Fly 1070 LKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYENA--------IMVVLLTTFGLAALPL 1126
Fly 1127 TYLVSMFVN-KSIVRAFLVSV-LLQGVSGLVLYIIYWDVANSNTI------------FFYAACMS 1177
Fly 1178 PGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMV 1242
Fly 1243 LSALIFLMLIFWIELHRREKKFHTSRDLRKMRTATYPF--DDGDVADVKQKI----AEADNTKAK 1301
Fly 1302 Q--SVF------LVDQVEARVPAAGKRIHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFA 1358
Fly 1359 FGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLM 1423
Fly 1424 LNMTGWMHRKCSLL----------TAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNI 1478
Fly 1479 LRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLI----- 1538
Fly 1539 ---------RD--GATLAESEEN-----LRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGH 1587
Fly 1588 IVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQLKH 1632 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1801 | NP_728408.3 | ABC2_membrane_3 | <246..379 | CDD:289468 | 23/138 (17%) |
ABC2_membrane_4 | <293..448 | CDD:289500 | 28/168 (17%) | ||
EcfA2 | 499..717 | CDD:224047 | 64/251 (25%) | ||
P-loop_NTPase | 500..721 | CDD:304359 | 65/254 (26%) | ||
ABC2_membrane_3 | <972..1254 | CDD:289468 | 72/347 (21%) | ||
EcfA2 | 1307..1521 | CDD:224047 | 57/223 (26%) | ||
P-loop_NTPase | 1324..1524 | CDD:304359 | 55/209 (26%) | ||
abca1a | NP_001296394.1 | rim_protein | 1..2233 | CDD:130324 | 396/1990 (20%) |
ABC_subfamily_A | 904..1122 | CDD:213230 | 62/233 (27%) | ||
ABC_subfamily_A | 1919..2139 | CDD:213230 | 60/243 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
3 | 2.920 |