DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and abca4b

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_021322694.1 Gene:abca4b / 555506 ZFINID:ZDB-GENE-050517-4 Length:2327 Species:Danio rerio


Alignment Length:2049 Identity:402/2049 - (19%)
Similarity:716/2049 - (34%) Gaps:603/2049 - (29%)


- Green bases have known domain annotations that are detailed below.


  Fly    49 LYTTTENENEQSIVSHKLQDINILTRMADSKRE---KTKYILAFT---PE-------TTFT-SEV 99
            |:...:|..:.:::...|::..::..:....||   .||.||.|.   ||       |:|. |:|
Zfish   438 LWDFFQNSIQMNMIRDTLRNPTVMDFLDRRLRETEFSTKDILNFLHNGPEGERFMNMTSFDWSDV 502

  Fly   100 TK----------NVAKTLELSSTVGYESESEMQNQ----FDERTTLAGIVFNDLRDDGTPLTLSI 150
            .:          ..::.:.|...||:..|:.|.:|    ..|....||:||.|:    .|.|:.:
Zfish   503 FRLADQAIRMFNRYSECISLDKFVGHMDENLMTHQALHLLGENKFWAGLVFMDM----YPWTIEL 563

  Fly   151 --SIRFPSEFRTIAPFLT---EDRLWITRCSGRINPGRDRAKHDKQQD-IYIREGFLQLQHQIFV 209
              .::|.......|...|   :||.|        :||   .:.|..:| .||..||..||..|  
Zfish   564 PRHVKFKIRMDIDAVERTNKIKDRYW--------DPG---PRADPVEDHRYIWGGFAYLQDLI-- 615

  Fly   210 EWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSVAQL------PTFL-YNFIYLLPFLNII 267
              .|.:.|  :.|..:..:.||   |:....||.|..:..|      |.|: ..:||.:..  ::
Zfish   616 --EHGILK--LHTGHDWPLGVY---LQQMPYPCYVDDMFMLTLNRCFPIFMVLAWIYSVSM--VV 671

  Fly   268 RNVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTG 332
            :::..:.|..:.......|.|.|:.|...|:..|:.|.....:.|.:::|     |:...:|  .
Zfish   672 KSIVLEKEMRLKETLKAMGVSNGVIWYTWFIDSFIMMTASTALLTGIVMA-----GKVLNYS--N 729

  Fly   333 TIAFVCFITLYTVEIIITGMVVAKLF--ANPTNAVLFALMLWLFMYAAFCI-------------- 381
            .|....|:..:||..|:...:::..|  ||...|....:...|::...||.              
Zfish   730 PIILFLFLLTFTVATIMQCFLMSVFFNKANLAAACSGIIYFTLYLPHIFCFAWQDRITKDMKLAV 794

  Fly   382 -------------ILERY--------WD-------IHKYYVFFILVAFCNCQMHFSMSLFRNCIE 418
                         .|.||        ||       ....|.||..:         .|.|      
Zfish   795 SLLSPVAFGFGTEYLSRYEEQGLGLQWDNIGTSPLEGDEYSFFTSI---------RMML------ 844

  Fly   419 KPEMVNTIDFVL----------IFTSAISSALIYFLILLAIQWRMP------GTFLSRRIVNNRP 467
                   :|.||          :|.........::..|.:..|..|      ...:..:.:.|..
Zfish   845 -------LDAVLYGVLAWYLDNVFPGQYGIGRPFYFPLQSSYWLKPSPPSETSNAVPEKPLENHV 902

  Fly   468 RKQQESDTTIMYLGRAPSFQNFEFGDVGSVELMRLRHVSTSHR-DSERK---------------- 515
            .||::    :.|.|.:|..:...    ||......:|.....| :.||:                
Zfish   903 EKQED----VEYGGLSPEHRECN----GSRNSKHCKHKEKRERMEKEREREEQLKMQEEIQQEEI 959

  Fly   516 ----------------ILKNIS--------------------MRIYRGEVFVILGHIGSGKLTLL 544
                            :|..:|                    |..|..::...|||.|:||.|.|
Zfish   960 QQWYCENPFFEPEPESLLIGVSVQDLVKMYNRYSRPAVDCLNMNFYESQITSFLGHNGAGKTTTL 1024

  Fly   545 RILAGLKFPLRGNVYIMGNPFEPNGEARRLVDFRFDEHG-LNKHLTVEQTIDYHVRLKLSPSESD 608
            .||.||..|..|..||.|.......:|.|.......:|. |.||||||:.|.::..:|....:..
Zfish  1025 SILTGLFPPTSGTAYIYGRDIRTEMDAIRQSLGMCPQHNILFKHLTVEEHILFYSLMKGREHKEA 1089

  Fly   609 RYEIERRKWLAILDQHVESRGV------RIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTG 667
            ..|:|..         :|..|:      ....||.|..:.:::.....|.:.::||:|||:.:..
Zfish  1090 EQEVENM---------LEDLGLPHKRDEEAQNLSGGMQRKLSVAMAFVGGSRVVILDEPTSGVDP 1145

  Fly   668 REAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVI 732
            ...:..|.::...:..|..|::|:::.||:.::||:.|:|.|.|..||:|.||::.|.....|.:
Zfish  1146 YSRRSIWDLLLKYRTGRTVILSTHHMDEADLLSDRVAIISKGKLHCSGSPLFLKNCFGVGFYLTL 1210

  Fly   733 I-------KKPHVPD----------------------QP----------ITDYINQFMQNIEPEN 758
            :       ||.:..|                      ||          ||..|:..:...:...
Zfish  1211 VRRMKDQRKKENECDCASECSCTCSTCTRYKEESQALQPERVLDGNVESITTLIHHHVPEAKLIE 1275

  Fly   759 EIGDSLTYRLP---VIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSDIYMTLVT--------- 811
            .||..:||.||   ..|| ....|...||.....:|:.:..:....|.:|::.:..         
Zfish  1276 MIGQEMTYLLPNKGFKYR-AYASLFRELEETLGDMGLSSFGISDTSLEEIFLKVTADGEAANSSV 1339

  Fly   812 ---SFRLQQQ----------------------MIPDVTQTFKYQVVSQKQLTKQRMRAMFYKKMI 851
               .:.|||:                      :..|.::....:.|....|..::..|:..|:..
Zfish  1340 TPEQWMLQQRKNGNGFMKDTGLAEDANGVGASLESDSSEGRASRQVKGFSLVLKQFHALLVKRFH 1404

  Fly   852 HTA---PNVWPIIMIFTSFVLIAIIARLSV----------------------------------- 878
            |..   .:....|::..||||||::..:.|                                   
Zfish  1405 HATRSHKDFLAQIVLPASFVLIALVFTMIVPPFGEYPCLTLTPWMYGPQFTFISNEQPSHPKMKH 1469

  Fly   879 ----------------------------------------------------------------- 878
                                                                             
Zfish  1470 FIQTLLKDPGMGTRCMANQPLENIFTCLNSSSDWEVPPVSPEVSNILSSPEWDSRNPSPSCECST 1534

  Fly   879 -----LLDM---------PKERQNSIHIGFREPE-DVVKYLPNLKDCGYI----------DIRSA 918
                 :|.|         |::|        :||. |::..:.|.....|:          .::|.
Zfish  1535 DLKLTMLPMCPAGAGGLPPRQR--------KEPTGDILLDMTNRNISDYLVKTYTKLIKTSLKSK 1591

  Fly   919 VKVNKKKSVGVS-----RTFDDD-----SFVCEKGSYRN------NLRKKNELRSF-GAVESDGD 966
            ..||:::..|:|     ...|.|     :...:.|...|      :....:||.:| ..:||  :
Zfish  1592 YWVNEQRYGGISVGGRLPILDVDPEEIQNIFSQLGRMMNIRGGRYSKSAMDELETFLHYMES--E 1654

  Fly   967 EHLNGYISQDMFHSAPMMLNLLQNVILRLSYPMQ---TDLVVLVENHPL---PTQLSQKINVLDN 1025
            .::..:.:...:|:....||:..|.|||...|..   :|..:...||||   ..|||: :.||..
Zfish  1655 YNVKVWYNNKGWHAMASFLNVANNAILRAYLPPHANPSDYGITAINHPLNLTKEQLSE-VTVLTT 1718

  Fly  1026 KIAHIHVPLVVGCII---PLTVSVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFV 1087
            .:..:    |..|:|   ....:.||:.|::|.:...:.||.::|:...|:|..|.|||...:.|
Zfish  1719 SVDAV----VAICVIFAMSFIPASFVLYLIQERVTKAKHLQFVSGVSPLVYWFANFFWDMLNYSV 1779

  Fly  1088 YSVIIVVIMSLMGIGGFGFYENA--------IMVVLLTTFGLAALPLTYLVS--------MFVNK 1136
            .:.::|.|.       .||.:..        .::.||..:|.:..|:.|.:|        .:|:.
Zfish  1780 STAMVVAIF-------VGFDKKCYTSPTNLPALIALLCLYGWSVTPMMYPLSYMFNVPSTAYVSL 1837

  Fly  1137 SIVRAFL------VSVLLQGVSGLVLYIIYWDVANSNTIFFYAACMSPGFSLLD-----GVSNVY 1190
            |.:..|:      ::.:|:........:::.:|.....:.|...|:..|  |:|     .|::||
Zfish  1838 SCINLFIGINSSAITFILELFENNRSLLMFNEVLKKVLLVFPHFCLGRG--LIDMAMNQAVTDVY 1900

  Fly  1191 AQNLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSALIFLMLIFWI 1255
            |:..|               |.:|:....|......|..|..|    .:|.:.:.||        
Zfish  1901 ARFGE---------------EFSMDPFRWNFVGKNLFCMAVEG----FVYFIFNLLI-------- 1938

  Fly  1256 ELHRREKKFHTSRDLRKMRTATYPFDDGDVADVKQKIAEADNTKAKQSVFL-------------- 1306
                 :.||.....:.....:....:|.|||..:::|.:..|   |..:.|              
Zfish  1939 -----QYKFFLHHWISDYGMSLGTDEDDDVAQERERIYKGGN---KNDILLIRDLSKTYRRRKRP 1995

  Fly  1307 -VDQVEARVPAAGKRIHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFK 1370
             ||::...|||.              ...|:.|...:||:...:.|.|......||:.|.|....
Zfish  1996 AVDKICVGVPAG--------------ECFGLLGVNGAGKTTTFKMLTGDTDVTSGELSVAGYSIL 2046

  Fly  1371 YDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCS 1435
            .::..:|..|||.||...:...||.|||:.|...:||:||::|..........|.::.:......
Zfish  2047 SNILDVHQNMGYCPQFDAIDELLTGREHLYLYARLRGIPESEISRVAEWGIQKLGLSEYAGNCAG 2111

  Fly  1436 LLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDELECK 1500
            ..:...:.||..|:|::....:::|||||.||...:||.:|..:..|...|:.::..::...||:
Zfish  2112 TYSGGNKRKLSTAIAMIGCPPLVLLDEPTTGMDPHSRRFLWTAILSIIRDGRAVVLTSHSMEECE 2176

  Fly  1501 ILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFL 1565
            .|...:.:..:.....:|::|:|:||:..|:.:.::       :..::..|..|:.....|::  
Zfish  2177 ALCTRLAIMVNGTFKCLGTIQHLKYKFGGGYVVTMK-------IKAAKPGLSPDLVPAESFMD-- 2232

  Fly  1566 HNRSELVGRLN-----NWFKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQE 1625
               |...|.:.     |..::.:....:  :.::..:..||.|||:.||.:.|..:..|.....:
Zfish  2233 ---SSFPGCIQREKHYNTLQYEIAAASL--ARVFQLVLTNKERLNIEDYSVSQTTLDQVFVNFAK 2292

  Fly  1626 TRA----QLKHHLVQTEGPLPLDTTSPKKGRAKK 1655
            .::    ....||.|: ||......||.:..|.|
Zfish  2293 QQSGEDDTAPSHLRQS-GPKREKKVSPLQRVATK 2325

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 27/141 (19%)
ABC2_membrane_4 <293..448 CDD:289500 35/208 (17%)
EcfA2 499..717 CDD:224047 64/277 (23%)
P-loop_NTPase 500..721 CDD:304359 66/280 (24%)
ABC2_membrane_3 <972..1254 CDD:289468 69/317 (22%)
EcfA2 1307..1521 CDD:224047 53/213 (25%)
P-loop_NTPase 1324..1524 CDD:304359 49/199 (25%)
abca4bXP_021322694.1 AAA 1..2315 CDD:333001 398/2037 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582249
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
54.750

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