DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and abca8

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_031749971.1 Gene:abca8 / 549630 XenbaseID:XB-GENE-1005441 Length:1619 Species:Xenopus tropicalis


Alignment Length:1825 Identity:371/1825 - (20%)
Similarity:706/1825 - (38%) Gaps:417/1825 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 KGLLFKRYIRIELNLWRR---TLFE---IVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVS 63
            |.||.|         |||   |:.|   .:|.|:::|:|.:..::...:|.|      |..:.|.
 Frog    20 KNLLLK---------WRRKWHTILEWLQNLAFVLVMLLISVMGLSTFVQLEY------NSPAEVL 69

  Fly    64 HKLQDINILTRMADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSSTVGYESESEMQNQFDER 128
            .:|..::      .|...|..|:  :|..|  :.::.:.|||::.:.. :..:..|:..|..|:.
 Frog    70 GRLDAVD------RSNNFKVGYV--YTSPT--SRDIMEKVAKSIIIPG-IKVQEYSDEGNLLDDM 123

  Fly   129 TTLA--GIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDRAKHDKQ 191
            |..|  |:.|.|        ..|..||:|  ...|| :..:...::..|:    ||....    .
 Frog   124 TNKAVVGVTFVD--------KFSYHIRYP--INNIA-YPNDYFAFMGFCA----PGSQAC----Y 169

  Fly   192 QDIYIREGFLQLQHQIFVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSVAQLPT---- 252
            ...|....||.||..|          |........|..|:       |...||::|....|    
 Frog   170 PTYYWSRQFLSLQASI----------DSAIIELTSNHSVW-------DNMASVVTVRMKSTVASF 217

  Fly   253 ----FLYNFIYLLPF----------LNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLR 303
                .:..||:|:|.          |.|.|......|...|:..  ...:|.:.||:.:|...| 
 Frog   218 RQYFHIGTFIFLMPMCYVSLMYLLSLYITRERREMRELLKMMRL--KDLAFWLSWGLLYLFYIL- 279

  Fly   304 MCILGVIYTIMLLAFWGFGGREGEF--SGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTNAVL 366
              ||..:.|::..||        .|  |..|.|.|:  ...|.:.::....:::.||.:|....:
 Frog   280 --ILANLMTLVTKAF--------VFVQSSYGIIMFL--FVFYGIALMSFTFMLSALFRSPRATAI 332

  Fly   367 FALMLWLFMYAAFCIILERYWDIHKYYVFFILVAFCNCQMHFSMSLFRNCIEKPEMVNTIDFVL- 430
            ....:.||:.|...::|.:.:......:..|...|.     |::.|    .|...|.:.:..|. 
 Frog   333 AGFFITLFLSALGLVLLRKDFPQALAVLLSIFPQFA-----FAVGL----TESVHMESDLQGVYF 388

  Fly   431 ---------IFTSAISSAL---------IYFLILLAIQ--------WRMPGTFLSRRIVNNRPRK 469
                     :.:|.||.||         :||..:||.:        :.|..::.|::.::....:
 Frog   389 SDMAGDSSHVLSSFISLALDSIFYMGLTLYFEKVLADKHGLKYEPFFFMKSSYWSKKKLSPVLTQ 453

  Fly   470 QQESDTTIM--YLGRAPSFQNFEFGDVGSVELMRLRHVSTSHRDSERKI--LKNISMRIYRGEVF 530
            .::|..:.|  :..|.|.       |:...|.:|:..|...:.|.::.|  |:.:.:.||.|::.
 Frog   454 TEDSGESSMGEFFERVPI-------DLHGKEAIRINKVMKKYCDQDKNIEALRGLDLNIYEGQIT 511

  Fly   531 VILGHIGSGKLTLLRILAGLKFPLRGNVYIMG---NPFEPNGEARRLV------DFRFDEHGLNK 586
            .:|||.|:||.|||.||:||.....|:..:..   :..:...|.::..      |.:|:.     
 Frog   512 ALLGHSGAGKTTLLNILSGLCPASDGSATVYSYKLSDMQHLEEIKKRTGFCPQSDVKFNP----- 571

  Fly   587 HLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVESRGVRIGKLSSGSMKLVALCCCLAG 651
             |||::.:....::|..|.:..:::::  |.|:.|..: :...|....||.|..:.:.|...|.|
 Frog   572 -LTVKENLTVFAKIKGIPRKQIKHKVQ--KVLSDLQMN-DIENVEADNLSGGQRRKLTLGIALLG 632

  Fly   652 DTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGT 716
            |..:::|:|||..|........|:|:...|.:|..:.:|..:.||:.:|||..::|.|.|:..|:
 Frog   633 DPQVLLLDEPTAGLDPCSRHHIWTILKENKADRVTLFSTQFMDEADILADRKAVISNGRLKCVGS 697

  Fly   717 PFFLRSKF------------SSSVDLVI-IKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRL 768
            ..||:.|:            :..|:|:. |.|.||||..:|           .:||  :.|||.|
 Frog   698 SLFLKRKWGIGYHLRMQVSPTCDVELMTSIIKQHVPDAKLT-----------AQNE--EELTYTL 749

  Fly   769 PVIYRPRLQKLLIHLEIDRKMLG--IENVRVVGAELSDIYMTLVTSFRLQQ---------QMIPD 822
            |.........|.:||:   ..:|  |.|..|....|.|:::.|.....:::         ...|:
 Frog   750 PFENMDAFPDLFLHLD---GQVGNSIVNYGVSMTTLDDVFLKLEGEGEIEKGDYGVFSPDSGAPE 811

  Fly   823 VTQTFK--------------------YQVVSQKQLTKQRMRAMFYKKMIHTAPNVWPIIMIFTSF 867
            ....|.                    ..:..|:.|...|:|.:   |:.|.:.....|:::...|
 Frog   812 DKDCFSAGMEDSLLLMSDSGSATLSGLSLWRQQVLAIARVRLL---KLKHDSKTFRSILILLALF 873

  Fly   868 VLIAIIARLSVLLDMPK----ERQNSIHIGFREPED-VVKYLPNLKDCGYIDIRSAVK----VNK 923
            : |.||....|:....|    |...|::  |:.||| ..:|..:|:.  |.:..|:::    ..|
 Frog   874 I-IPIIMTTIVIKIFHKVITWELTPSLY--FQHPEDRFHRYYTDLQI--YNNTGSSIEDFLGALK 933

  Fly   924 KKSVGVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYISQDMFHSAPMMLNLL 988
            ::::.|...  :..:..|...||..:......:.:|.......:..|         :.|:::|::
 Frog   934 EQNIAVQVV--NGEYDMETTFYRGAIEVSQATKGYGFTIVGNPKAQN---------ALPVLVNII 987

  Fly   989 QNVILRLSYPMQTDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVS----VFVI 1049
            .|.:|.:   ..:...:.|.|||:...|.:...         .|....|.::.|..|    .|.:
 Frog   988 SNALLMI---FNSTEHIRVWNHPVTEYLVEDFE---------SVTFYSGFMLLLFASGLAPHFAM 1040

  Fly  1050 PLVEEEIYDVRFLQHMAGLGLKVFW------GINLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYE 1108
            ..:|:.....|....::|:....:|      .:.|:|     .:..:::.::.|......|.|..
 Frog  1041 SSIEDRRIKARTQLRISGIFPSAYWFGQALVDVPLYW-----ILLFLMVAILFSFNSQVIFSFVP 1100

  Fly  1109 NAIMVVLLTTFGLAALPLTYLVSMFVNKS-----------IVRAFLVSVLLQGVSGLVLYIIYWD 1162
            ..|::..:..:|.|.:...|::|....:.           ::.||:..:||..||...:.|.::.
 Frog  1101 AIILITGVIGYGAAVVLYVYVISFVFGRGKSHHDGWSIFFVISAFIPMILLDVVSTYAVGITFFL 1165

  Fly  1163 VANSNTIFFYAACMSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFF 1227
            :..::|              |.|:..          |||......|..|:..       ....||
 Frog  1166 LLPAST--------------LSGIIR----------CIDVYHFDRSTLEDEH-------LLYLFF 1199

  Fly  1228 KWAAPGILPPILYMVLSALIFLMLIFWIELHR-------REKKFHTSRDLRKMRTATYPFDDGDV 1285
                     |.|::|:     ..:|.|: |.|       :...|:..:..:.........|:..:
 Frog  1200 ---------PFLHIVI-----FSVILWV-LERVFGMRSLKTNLFYRKKVQKNQEELGEDTDEEVL 1249

  Fly  1286 ADVKQ-KIAEADNTKAKQSVFLVDQV--EARV-----------PAAGKRIHTVSFALNKYMSMGI 1336
            |:.:: |::...|...::.:.:||.:  |.:|           .||.|.|   ||.:.|...:|:
 Frog  1250 AERERVKMSSTTNNMEEKPIIIVDSLRKEYKVKKGKSFFKKNKKAATKNI---SFCVRKGEVLGL 1311

  Fly  1337 FGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLD------FKYDLESIHTYMGYSPQHRGLLNELTP 1395
            .||..:||:..:..|.|:.....||:.:.|.|      .:||...   .:||.||...|...||.
 Frog  1312 LGPNGAGKTTSIYMLAGEIRPTAGEVLLCGTDPDKSQNSQYDPTG---SLGYCPQDNPLWPNLTV 1373

  Fly  1396 REHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVL 1460
            ::|:.:...::|:.:......:..:...|.:...:.:....|:|....|:..|::::....|::|
 Frog  1374 KQHLEIYAAVKGLKKKDAETAIKRVSEALELKEHLEKAARKLSAGVSRKVCFAISMLGNPNIVLL 1438

  Fly  1461 DEPTCGMPATTRREIWNILR-YIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLR 1524
            |||:.|:....::.:|..:| ..|...:..|..|:...|.:.:.|.:.:....::..|||:|.|:
 Frog  1439 DEPSTGLDPKGQQRLWRAIRSAFRNKDRGAILTTHYMEEAEAVCDRVAIMVSGKLRCIGSIQQLK 1503

  Fly  1525 YKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELV---------GRLNNWFK 1580
            .|:..|:.||::                  |:| :..|:.:||  |::         .|.::...
 Frog  1504 SKFGKGYLLEIK------------------VKN-SNQVDQIHN--EIIQIFPHAARQDRFSSLLV 1547

  Fly  1581 FYVPVGHI-VYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRA----------QLKHHL 1634
            :.:||.:: ..|..:..:|:.|...|:.:|...|..:..|..::.:.:.          |.|...
 Frog  1548 YKIPVENVQSLSKAFLDLEEAKRAYNIEEYSFSQPTLTQVFIELTKEQEREDFDSASTFQWKQLR 1612

  Fly  1635 VQTEG 1639
            .::||
 Frog  1613 TESEG 1617

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 33/152 (22%)
ABC2_membrane_4 <293..448 CDD:289500 36/175 (21%)
EcfA2 499..717 CDD:224047 60/228 (26%)
P-loop_NTPase 500..721 CDD:304359 61/231 (26%)
ABC2_membrane_3 <972..1254 CDD:289468 49/302 (16%)
EcfA2 1307..1521 CDD:224047 54/233 (23%)
P-loop_NTPase 1324..1524 CDD:304359 47/206 (23%)
abca8XP_031749971.1 rim_protein <225..1601 CDD:130324 310/1540 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
22.010

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