DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and osy

DIOPT Version :10

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_001034071.1 Gene:osy / 43186 FlyBaseID:FBgn0053970 Length:777 Species:Drosophila melanogaster


Alignment Length:826 Identity:166/826 - (20%)
Similarity:308/826 - (37%) Gaps:182/826 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly   500 MRLRHVSTSHRDSERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNP 564
            :|..|.......:...:|..::|.:.:|.::.:||..|.||.|||..:.|.:....|.::::|. 
  Fly    50 VRRAHKMYGSSKNPNVVLDGLNMTVPKGSIYGLLGASGCGKTTLLSCIVGRRRLNSGEIWVLGG- 113

  Fly   565 FEP----NGEARRLVDFRFDEHGLNKHLTVEQTIDYHVRLKLSPSESDRYEIERRK--WLAILDQ 623
             .|    :|.....:.:...|..|....|:.:|:.|...:    |...:.:||.|.  .|.:|:.
  Fly   114 -RPGSRGSGVPGPRIGYMPQEIALYGEFTMRETLIYFGII----SAMSKGDIEDRTEFLLKLLNL 173

  Fly   624 HVESRGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWS-IVHAEKE-NRAF 686
            ...|:.|:  .||.|..:.|:|...|..:..::||:|||..:.....|..|. :|...|. :...
  Fly   174 PNASKFVK--NLSGGQQRRVSLAVALLHEPELLILDEPTVGVDPVLRQSIWDHLVDITKNGHTTV 236

  Fly   687 IIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSS-SVDLVIIKKPHVPDQPITDYINQF 750
            ||.|:.:.|... |..||:|..|.:.|..:|.:||.:::: |::.|.:|.             ..
  Fly   237 IITTHYIDECAQ-AHMIGLLRGGKMLAEESPDYLRQQYNADSLEDVFLKL-------------SV 287

  Fly   751 MQNIEPE------NEIGDSLTYRLPVIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSD-IYMT 808
            :||:...      .||.:.:|  :|.|..|.|.           |...::...:..|..| |.|:
  Fly   288 LQNMGKRRRSSIAQEIVEQVT--VPAISNPALD-----------MSDEQHAAEISGEFGDNISMS 339

  Fly   809 ------LVTSFRLQQQMIP--DVTQTFKYQVVSQKQLTKQRMRAMFYKKMIHTAPNV-------- 857
                  :.|:......:.|  ::..:|.|.:   ..:....:.|:.:|..:....||        
  Fly   340 SAARDPISTTAPAAPPLPPPQEIPTSFWYNL---HVMQSHHLHALIWKNFLWMMRNVGVMLFIVG 401

  Fly   858 WPIIMIFTSFVLIA--------IIARLSVLLDMPKERQNSIHIGFREPEDVVKYLPNLKDCGYID 914
            .|::.|......|.        .:|...:..:|..|:...:|.|..:         .:..|.|:|
  Fly   402 LPVVQILLFCYAIGHDPTGLKLAVANHEMSGEMIMEQFCPVHTGCNQ---------TMLSCRYLD 457

  Fly   915 IRSAVKVNKKKSVGVSRTFDDDSFVCE--KG----------SYRNNLRKKNELRSF---GAVESD 964
            :     :.|.||:.|....||:....|  ||          :|..:|.::.|...:   |.:||.
  Fly   458 M-----LVKNKSMVVQYVTDDEMAYEEVRKGRAWAALVIQPNYTASLMERVEDGRYAEDGTIESS 517

  Fly   965 G----DEHLNGYISQDMFHSAPMMLNLLQNVILRLSYPMQTDLVVLVENHPLPTQLSQKI----- 1020
            .    .:..|..|||.::..       ||.........|.:|..|..:...:|......:     
  Fly   518 DLAVRMDWSNQQISQLLYRD-------LQYTFFNFVGDMLSDCDVNPKLGRVPVDFQHPVYGYRN 575

  Fly  1021 -NVLDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDVRFLQHMAGL-GLKVFWGINLFWDWF 1083
             |..|.....:.:.::....:.:|....:|...|..:  .|.|  :||: |.::.  ::.....|
  Fly   576 PNFTDFAAPGVILTIIFFLAVAVTSGAMLIDRNEGML--ERCL--VAGITGPEIL--LSQVVTQF 634

  Fly  1084 TFFVYSVIIVVIMSLMGIGGFGFYE-----NAIMVVLLTTF-GLAALPLTYLVSMFVNKS----- 1137
            |..:.....|:|:|      |.|:|     |..:||.|... ||..:...:::|..|:..     
  Fly   635 TVMLSQTTFVLIVS------FYFFELTLVGNIWLVVALCILNGLCGMSFGFVISCAVDTERTATY 693

  Fly  1138 -IVRAFLVSVLLQGVSGLVLYIIYWDVANSNTIFFYAACMSPGFSLLDGVSNVYAQNLEQAICID 1201
             .:.:||..|:|.|        |.|.:.....:..:.....|.....:.:.::    |::...||
  Fly   694 VAMGSFLPIVMLCG--------IIWPIEGMFPLLQFFTAFLPLTKPTESMRSI----LQRGWGID 746

  Fly  1202 KCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSALI 1247
                         |.||.| .|.:...|.       ::::||:.|:
  Fly   747 -------------NPVVYN-GFISISSWV-------LVFLVLTILL 771

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:463674
rim_protein <514..1537 CDD:130324 164/812 (20%)
osyNP_001034071.1 CcmA 50..285 CDD:440746 61/243 (25%)
YadH 578..773 CDD:440604 45/239 (19%)
Blue background indicates that the domain is not in the aligned region.

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