Sequence 1: | NP_728408.3 | Gene: | CG1801 / 33104 | FlyBaseID: | FBgn0031171 | Length: | 1655 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_038965774.1 | Gene: | Abca1 / 313210 | RGDID: | 631344 | Length: | 2263 | Species: | Rattus norvegicus |
Alignment Length: | 2007 | Identity: | 390/2007 - (19%) |
---|---|---|---|
Similarity: | 722/2007 - (35%) | Gaps: | 602/2007 - (29%) |
- Green bases have known domain annotations that are detailed below.
Fly 20 WRRTL--FEIVALVIMVLVIFL--NP--IAHSKRLLYTTTE--NENEQSI--VSHKLQDINILTR 74
Fly 75 MADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSSTVGYESESEMQNQFDERTTLAGIVFNDL 139
Fly 140 RDDGTPLTLSISIRFPSEFRTI-APFLTEDRLWITRCSGRINPGRDRAKHDKQQDI-YIREGFLQ 202
Fly 203 LQ---HQIFVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSV------AQLPTFLYNFI 258
Fly 259 YLLPFLNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIMLLAFWGFGG 323
Fly 324 REGEF--SGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTNAVLFALMLWLFMYAAF--CIILE 384
Fly 385 RY--WDIHKYYVFFILVAF-CNCQMHFSM-----------SLFRNCIEKP--EMVNTIDFVLIFT 433
Fly 434 SAISSALIYFLILLAIQWRMPGTFLSRRIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGD----- 493
Fly 494 -------VGSVEL------------MRLRHVSTSHRDSERKILKNISMRIYRGEVFVILGHIGSG 539
Fly 540 KLTLLRILAGLKFPLRGNVYIMGNPFEPNGEARRLVDFRFDEHGLNKH-------------LTVE 591
Fly 592 QTIDYHVRLKLSPSESDRYEIERRKWLAILDQHV----ESRGVRIG-----------KLSSGSMK 641
Fly 642 LVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGIL 706
Fly 707 SMGVLEASGTPFFLRSKFSSSVDLVIIK--------------------KPHVPDQP--------- 742
Fly 743 ---------------ITDYINQFMQNIEPENEIGDSLTYRLPVIYRPRLQKLLIHL--EIDRKM- 789
Fly 790 -LGIENVRVVGAELSDIYMTLV--------------------TSFRLQQQMI------------- 820
Fly 821 ----PDVTQT---------FKYQVVSQKQLTKQRMRAMFYKKMI---HTAPNVWPIIMIFTSFVL 869
Fly 870 IAIIARL-----------------------SVLLDMPKE--RQNSIHIGFREP------------ 897
Fly 898 ---------ED----------------------------------VVKYLP-------------- 905
Fly 906 --------------NLKDC---GYIDI-----RSAVKVNK------------------------- 923
Fly 924 ----KKSVGVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYISQDMFHSAPMM 984
Fly 985 LNLLQNVILRLSY-----PMQTDLVVLVENHPL---PTQLSQ------KINVLDNKIAHIHVPLV 1035
Fly 1036 VGCIIPLTVSVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMG 1100
Fly 1101 IGGFGFYEN-AIMVVLLTTFGLAALPLTYLVSMFVNK--SIVRAFLVSV-LLQGVSGLVLYIIYW 1161
Fly 1162 -----------DVANSNTIFFYAACMSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMN 1215
Fly 1216 EVVPNCKFD----TFFKWAAPGILPPILYMVLSALIFLMLIFWIELHRREKKFHTSRDLRKMRTA 1276
Fly 1277 TYPFDDGDVADVKQKIAEADNTKAKQSVFLVDQV-----EARVPAAGKRIHTVSFALNKYMSMGI 1336
Fly 1337 FGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRL 1401
Fly 1402 LCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLT-AEK---------RHKLKIALALVAYNK 1456
Fly 1457 ILVLDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQ 1521
Fly 1522 YLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVG 1586
Fly 1587 HIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQLKH------HLVQT 1637 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1801 | NP_728408.3 | ABC2_membrane_3 | <246..379 | CDD:289468 | 21/140 (15%) |
ABC2_membrane_4 | <293..448 | CDD:289500 | 29/174 (17%) | ||
EcfA2 | 499..717 | CDD:224047 | 57/257 (22%) | ||
P-loop_NTPase | 500..721 | CDD:304359 | 58/248 (23%) | ||
ABC2_membrane_3 | <972..1254 | CDD:289468 | 73/314 (23%) | ||
EcfA2 | 1307..1521 | CDD:224047 | 56/228 (25%) | ||
P-loop_NTPase | 1324..1524 | CDD:304359 | 54/209 (26%) | ||
Abca1 | XP_038965774.1 | rim_protein | 1..2238 | CDD:130324 | 387/2001 (19%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
4 | 3.920 |