Sequence 1: | NP_728408.3 | Gene: | CG1801 / 33104 | FlyBaseID: | FBgn0031171 | Length: | 1655 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001268753.1 | Gene: | Abca8a / 303638 | RGDID: | 1307333 | Length: | 1615 | Species: | Rattus norvegicus |
Alignment Length: | 1715 | Identity: | 347/1715 - (20%) |
---|---|---|---|
Similarity: | 667/1715 - (38%) | Gaps: | 393/1715 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 IRIELNLW------------------RRTLFEIV--ALVIMVLVIFLNPIAHSKRLLYTTTENEN 57
Fly 58 EQSIVSHKLQDINILTRMADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSSTVGYESESEMQ 122
Fly 123 NQFDERTTLAGIVFNDLRDDGTPLTLSISIRFPSEFR--TIAPFLTEDRLWITRCSGRINPGRDR 185
Fly 186 AKHDKQQDIYIREGFLQLQHQI---FVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVMS- 246
Fly 247 VAQ--LPTFLYNFIYLLPFLNIIRNVAAQVE------DGVMVHQWHYGYSFGMQWGIKF--LVLF 301
Fly 302 LRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLFANP--TNA 364
Fly 365 VLFALML--WLFMYAAFCIILERYWDIHKYYVFFILVAFC-------NCQMHFSMSLFRNCIEKP 420
Fly 421 EMVNTIDFVLIFTSAISSALIYFLILLAIQWRMPGTFLSRR-----IVNNRPRKQQESDTTIMYL 480
Fly 481 GRAPSFQNFEFGDVGS----VELMRLRHVSTSH--RDSERKILKNISMRIYRGEVFVILGHIGSG 539
Fly 540 KLTLLRILAGLKFPLRGNVYIMGNPFEPNGEARRL-----------VDFRFDEHGLNKHLTVEQT 593
Fly 594 IDYHVRLKLSPSESDRYEIERRKWLAILDQHVESRGVRIGKLSSGSMKLVALCCCLAGDTPIIIL 658
Fly 659 EEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSK 723
Fly 724 FSSSVDLVI-------------IKKPHVPDQPITDYINQFMQNIEPENEIGDSL----TYRLPVI 771
Fly 772 YRPRLQKLLIHLEIDR-KMLGIENVRVVGAELSDIYMTLVTSFRLQQQMIPDVTQTFKYQ----- 830
Fly 831 ------------VVSQKQLTKQRMRAMFYK-----------KMIHTAPNVWPIIMIF---TSFVL 869
Fly 870 IAIIARLSVLLDMPKERQNSIHIGFREPEDVVKYLPNLKDCGYIDIRSAVKVNKKKSVGVSRTFD 934
Fly 935 DDSFVCEKGSYRNNLRKKN---ELRSFGAVESDGDEHLNGYI---------------SQDMFHSA 981
Fly 982 PMMLNLLQNVILRLSYP---MQTDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLT 1043
Fly 1044 VSVFVIPLVEEEIYDVR--FLQHMAGLGLKVFW-GINLFWDWFTFFVYSVIIVVIMSLMGIGGFG 1105
Fly 1106 FYENAIMVVLLTT------------FGLAALPLTYLVSMFVNKSIVRAFLVSVLLQGVSGLVLYI 1158
Fly 1159 IYWDVANSNTIFFYAACMSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEV--VPNC 1221
Fly 1222 KFDTFFKWAAPGILPPILYMVLSALIFLMLIFWIELHRREKKFH------------TSRDLRKMR 1274
Fly 1275 TATYP-FDDGDV-------------ADVKQK---IAEA--DNTKAKQSVFLVDQVEARVPAAGKR 1320
Fly 1321 IHT--VSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYS 1383
Fly 1384 PQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIA 1448
Fly 1449 LALVAYNKILVLDEPTCGMPATTRREIWNILR-YIRYCGKTIIFATNDELECKILADFIILFQDS 1512
Fly 1513 EMLAIGSLQYLRYKYSHGFYLEVRL 1537 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1801 | NP_728408.3 | ABC2_membrane_3 | <246..379 | CDD:289468 | 27/147 (18%) |
ABC2_membrane_4 | <293..448 | CDD:289500 | 29/167 (17%) | ||
EcfA2 | 499..717 | CDD:224047 | 63/230 (27%) | ||
P-loop_NTPase | 500..721 | CDD:304359 | 64/233 (27%) | ||
ABC2_membrane_3 | <972..1254 | CDD:289468 | 59/316 (19%) | ||
EcfA2 | 1307..1521 | CDD:224047 | 43/216 (20%) | ||
P-loop_NTPase | 1324..1524 | CDD:304359 | 41/200 (21%) | ||
Abca8a | NP_001268753.1 | ABC2_membrane_3 | 27..416 | CDD:289468 | 86/456 (19%) |
DUF4149 | 267..354 | CDD:290390 | 21/102 (21%) | ||
ABC_subfamily_A | 477..698 | CDD:213230 | 64/233 (27%) | ||
drrA | 493..787 | CDD:130256 | 84/325 (26%) | ||
ABC2_membrane_3 | <1005..1155 | CDD:289468 | 33/171 (19%) | ||
CcmA | 1272..1591 | CDD:224054 | 53/254 (21%) | ||
ABC_subfamily_A | 1279..1500 | CDD:213230 | 47/232 (20%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C166342183 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.850 |