DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca12

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_237242.6 Gene:Abca12 / 301482 RGDID:1304586 Length:2595 Species:Rattus norvegicus


Alignment Length:1758 Identity:373/1758 - (21%)
Similarity:690/1758 - (39%) Gaps:372/1758 - (21%)


- Green bases have known domain annotations that are detailed below.


  Fly    99 VTKNVAKTLELSSTVGYE--SESEMQNQFD-ERTTLAGIVFNDLRDDGTPLTLSISIRFPSEFRT 160
            :.|.:.|:.||..:|.::  |.......|| ||.:|..||         ..|:.:|::.....|:
  Rat   939 IAKQLYKSNELFGSVIFKLPSNGSSHRGFDSERVSLPPIV---------RYTIRMSLKTAQTTRS 994

  Fly   161 IAPFLTEDRLWITRCSGRINPGRDRAKHDKQQDIYIREGFLQLQHQIFVEWYHQLRKDIVSTYPE 225
            |     ..::|.        ||...:....|  ||.| .|:.||..|        .:.|:.....
  Rat   995 I-----RTKIWA--------PGPHNSPSHNQ--IYGR-AFIYLQDSI--------ERAIIELQTG 1035

  Fly   226 PNVEVYNILLKAADEPCSVMSVAQLPTFLYNFIYLLPFLNIIR---NVAAQV-----EDGVMVHQ 282
            .|.:...:.::|...||.:..     .||.:..|.||.:.::.   .:||.|     |..:.:|:
  Rat  1036 RNSQEVAVQVQAVPYPCFMKD-----NFLTSVSYSLPIVLMVAWVVFIAAFVKKLVYEKDLRLHE 1095

  Fly   283 W----------HYGYSFGMQWGIKFL-VLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAF 336
            :          |:     ..|.|:.: .|.:.:.||     |::|.|.....:.     .|.|.|
  Rat  1096 YMKMMGVNSCSHF-----FAWLIESIGFLLVTIAIL-----IVILKFGNILPKT-----NGFILF 1145

  Fly   337 VCFITLYTVEIIITGMVVAKLFANPTNAVLFALMLWLFMYAAFCIILERYWDIHKYY--VFFILV 399
            :.| :.|:..:|....:::..|.|...|.|...::::..:..| |:|....|...|.  ||..|:
  Rat  1146 LYF-SDYSFSVIAMSYLISVFFNNTNIAALIGSLIYVIAFFPF-IVLVTVEDELSYVIKVFMSLL 1208

  Fly   400 ---AFCNCQMHFS------MSL-FRNCIEKPEMVNTIDFVLIFTSAISSALIYFLILLAIQWRMP 454
               ||.....:.:      :.| :.|..:.|...:|..|..:....::.:.|||.|...::...|
  Rat  1209 SPTAFSYASQYIARYEEQGIGLQWENMYKSPVQDDTTSFGWLCCLILADSFIYFFIAWYVRNVFP 1273

  Fly   455 GT----------------------------------FLSRRIVNNRPRKQQESDTTIMYLGRAPS 485
            ||                                  |.:..:.:..|...:.|..........|.
  Rat  1274 GTYGMAAPWYFPVLPSYWKERFGCAEVKHEKSNGLMFTNIMMQSTNPSANKTSPDCAFPSNIEPE 1338

  Fly   486 FQNFEFGDVGSVELMRLRHVSTSHRDSERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGL 550
            .::.:.|       :.|..|:.|:  ..:..:.|:::..|.|.:..:||..|:||.|.:.:|.||
  Rat  1339 PKDLQVG-------VALHGVTKSY--GSKTAVDNLNLNFYEGHITSLLGPNGAGKTTTISMLTGL 1394

  Fly   551 KFPLRGNVYIMGNPFEPN-GEARRLVDFRFDEHGLNKHLTVEQTIDYHVRLKLSPSESDRY---E 611
            .....|.:::.|...:.: ...|:.:........|..:||.::.:..:..:|: |..:.:.   |
  Rat  1395 FGATAGTIFVYGKDIKTDLNTVRKNMGVCMQHDVLFSYLTTKEHLLLYGSIKV-PHWTKKQLHEE 1458

  Fly   612 IERRKWLAILDQHVES-RGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWS 675
            ::|    .:.|..:.| |..|:|.||.|..:.:::...|.|.:.::||:||:|.:.....:..|.
  Rat  1459 VKR----TLKDTGLYSHRHKRVGTLSGGMKRKLSISIALIGGSRVVILDEPSTGVDPCSRRSIWD 1519

  Fly   676 IVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKK--PHV 738
            ::...|..|..|::|:::.|||.::|||..|..|.|...|:||:|:..|.....|.:.||  |::
  Rat  1520 VISKNKTARTIILSTHHLDEAEVLSDRIAFLEQGGLRCCGSPFYLKEAFGDGYHLTLTKKKSPNL 1584

  Fly   739 PDQPITD--YINQFMQNIEPE----NEIGDSLTYRLPVIYRPRLQKLLIHLEIDRKMLGIENVRV 797
            ....|.|  .:...:|:..||    .:||..|.|.||..........|..|....|.:|..|:..
  Rat  1585 DTNAICDTVAVTAMIQSHLPEAYLKEDIGGELVYVLPPFSTKVSGAYLSLLRALDKGMGKLNIGC 1649

  Fly   798 VG---AELSDIYMTLVTSFR---------LQQQMI----------PD--VTQTFKYQVVSQKQLT 838
            .|   ..:.::::.|....:         |.|:.:          ||  ...:..:.....|.||
  Rat  1650 YGISDTTVEEVFLNLTKDSQKCGNMSLEHLTQRKVGNPSANGTSTPDDLSVSSSNFTDRDDKVLT 1714

  Fly   839 K-----------QRMRAMFYKKMIHTAPNVWP--IIMIFTSFVLIAIIARLSVLLD--------- 881
            :           :::.|:..|:..||..| |.  |..:....|.:|....|..|.|         
  Rat  1715 RSERLDGFGLLLKKIMAILIKRFHHTRRN-WKGLIAQVVLPIVFVATAMGLGTLRDSSNSYPELL 1778

  Fly   882 -MPKERQNSIHIGFREPED-----VVKYLPNLKDCGYIDIR-SAVKVNKKKSVGVSRTFDD--DS 937
             .|....||....|....|     :|..|.|......:.:. |..:..||.::|...|..:  |:
  Rat  1779 ISPSIYGNSEQTAFYANFDPSTNALVSALWNFPGIDNVCLNTSDSQCLKKDNLGKWNTSGEAIDN 1843

  Fly   938 F----------VCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGY-------------------- 972
            |          .|.|.:|....|:   ..|...:.:...:|:..|                    
  Rat  1844 FGVCSCSDNVQECPKFNYSPPHRR---TYSSQVIYNLTGKHMENYLISTANHFVQKRYGGWSFGM 1905

  Fly   973 -ISQDM----------------------FHSAPMMLNLLQNVILRLSYPMQTDLV---VLVENHP 1011
             ::.|:                      :||.|..||.|.|.:||::. .:.|..   :::.:||
  Rat  1906 KLTNDLRFDVTAVPVNRTLAKVWYDPEGYHSLPAYLNSLNNFLLRVNM-SEYDAARHGIIMYSHP 1969

  Fly  1012 LP-------TQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDVRFLQHMAGLG 1069
            .|       ..:|..|::|      :.:.:::|  ..:|.:.||..:|.|.....:.|||::|:|
  Rat  1970 YPGVQDQEQATISSLIDIL------VALSILMG--YSVTTASFVTYIVREHQTKAKQLQHISGIG 2026

  Fly  1070 LKVFWGINLFWDWFTFFV---YSVIIVVIMSLMGIGGFGFYEN---AIMVVLLTTFGLAALPLTY 1128
            :..:|..|..:|...:.|   :|:.::.|..|.     .||..   ..:.:||..||.|.....|
  Rat  2027 VTCYWVTNFIYDMVFYLVPVAFSIGVIAIFKLP-----AFYSGNNLGAVSLLLLLFGYATFSWMY 2086

  Fly  1129 LVSMFVNKSIVRAFLVSV---LLQGVSGLV-LYIIYW---DVANSNT------------IFFYAA 1174
            |::...:::.: ||:..|   |..|::.:| |.::|:   :..|..|            :.|...
  Rat  2087 LLAGLFHETGM-AFITYVCVNLFFGINSIVSLSVVYFLSKEKPNDPTLELISETLKRIFLIFPQF 2150

  Fly  1175 CMSPGFSLLDGVSNVYAQNLEQAICID--KCEATDSCTEENMNEVVPNCKFD------TFFKWAA 1231
            |.  |:.|::       .:.:||: :|  |....|          .|:..|:      .|....:
  Rat  2151 CF--GYGLIE-------LSQQQAV-LDFLKAYGVD----------YPSETFEMDKLGAMFVALVS 2195

  Fly  1232 PGILPPILYMVLSALIFLMLIFWIELHRREKKFHTSRDLRKMRTATYPFDDGDVADVKQKI---- 1292
            .|    .::.:|..||...||..:.|..|  ||.:|   ..|.|..   :|.||...:.::    
  Rat  2196 QG----TMFFLLRLLINEWLIKKLRLFFR--KFTSS---PVMETVD---EDEDVHTERLRVESGA 2248

  Fly  1293 AEADNTKAKQSVFLVDQVEARVPAAGKRIHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGF 1357
            ||.|..:..:.......:..::.|    ::.:|..:......|:.|...:||:.:.:.|.|....
  Rat  2249 AEFDLVQLHRLTKTYQLIHKKIIA----VNNISLGIPAGECFGLLGVNGAGKTTIFKMLTGDIIP 2309

  Fly  1358 AFGEIYVRGLDFKY-DLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLC 1421
            :.|.|.:|...... .::|..:.:||.||...|.:.:|..||:.....:.|:||..|.|.:|.|.
  Rat  2310 SSGNILIRNKSGSLGHVDSHSSLVGYCPQEDALDDLVTVEEHLYFYARVHGIPEKDIKETVHKLL 2374

  Fly  1422 LMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCG 1486
            ..|::..:..|..|:.:...:.||..||||:....||:||||:.||...::|.:|.|:.......
  Rat  2375 RRLHLMAYKDRSTSMCSYGTKRKLSTALALIGKPSILLLDEPSSGMDPKSKRHLWRIISEEVQNK 2439

  Fly  1487 KTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENL 1551
            .::|..::...||:.|...:.:..:.....|||||:::.::..||.::|.|           :|.
  Rat  2440 CSVILTSHSMEECEALCTRLAIMVNGRFQCIGSLQHIKSRFGRGFTVKVHL-----------KNN 2493

  Fly  1552 RKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADM 1616
            :..:|||.||:.....::.|..:..:..:::|||.....:.::..:|.||..||::::.:.|..:
  Rat  2494 KVSMENLTKFMQLHFPKTYLKDQHLSMLEYHVPVTAGGVANIFDLLETNKTALNITNFLVSQTTL 2558

  Fly  1617 MSV 1619
            ..|
  Rat  2559 EEV 2561

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 29/151 (19%)
ABC2_membrane_4 <293..448 CDD:289500 37/167 (22%)
EcfA2 499..717 CDD:224047 55/222 (25%)
P-loop_NTPase 500..721 CDD:304359 57/225 (25%)
ABC2_membrane_3 <972..1254 CDD:289468 73/367 (20%)
EcfA2 1307..1521 CDD:224047 54/214 (25%)
P-loop_NTPase 1324..1524 CDD:304359 55/200 (28%)
Abca12XP_237242.6 ABC2_membrane_3 <1006..1267 CDD:289468 61/293 (21%)
NosY <1108..1269 CDD:224196 37/177 (21%)
ZnuC 1346..1570 CDD:224046 59/230 (26%)
ABC_subfamily_A 1350..1565 CDD:213230 56/221 (25%)
ABC2_membrane_3 <1913..2174 CDD:289468 61/285 (21%)
CcmA 2253..2567 CDD:224054 77/324 (24%)
ABC_subfamily_A 2254..2477 CDD:213230 56/226 (25%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342223
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.850

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