DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca7

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_997481.1 Gene:Abca7 / 299609 RGDID:1303134 Length:2170 Species:Rattus norvegicus


Alignment Length:1798 Identity:367/1798 - (20%)
Similarity:643/1798 - (35%) Gaps:491/1798 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    97 SEVTKNVAKTLELSSTVGYESESEMQNQ----FDERTTLAGIVF------NDLRDDGTPLT---- 147
            :|:...:.:.:.|.......||..:.::    ..||...|||||      .|..:..:|.|    
  Rat   394 AEILGQILECVSLDKLEAVPSEEALVSRALELLGERRLWAGIVFLSPEHPLDSSEPPSPTTTGPG 458

  Fly   148 -LSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDRAKHDKQQDI-YIREGFLQLQHQIFVE 210
             |.:.||...:..|....: .|:.|        :||   ...|...|: |:..||:.||      
  Rat   459 HLRVKIRMDIDDVTRTNKI-RDKFW--------DPG---PSADPLMDLRYVWGGFVYLQ------ 505

  Fly   211 WYHQLRKDIVSTYPEPNVEVYN-------ILLKAADEPCSVMSV------AQLPTFL-YNFIYLL 261
                   |::.   :..|.|.:       :.|:....||.|..|      ..||.|| ..:||.:
  Rat   506 -------DLLE---QAAVRVLSGRDSRAGLYLQQMPHPCYVDDVFLRVLSRSLPLFLTLAWIYSV 560

  Fly   262 PFLNIIRNVAAQVEDGVMVHQWHYGYSFGMQW-------------GIKFLVLFLRMCILGVI--Y 311
            ..  .::.|..:.|..:.......|.|..:.|             ....|||.|:   ||.|  |
  Rat   561 AL--TVKAVVREKETRLRETMRAMGLSRAVLWLGWFLSCLGPFLVSAALLVLVLK---LGNILPY 620

  Fly   312 TIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTNAVLFALMLWLFMY 376
            :..::.|                   .|:..:.|..:....:::..|:....|.....:.:..:|
  Rat   621 SHPVVVF-------------------LFLAAFAVATVAQSFLLSAFFSRANLAAACGGLAYFALY 666

  Fly   377 AAF--CIILERYWDIHKYYVFFIL--VAF-CNCQMHFSMSLFRNCIEKPEMVNTID------FVL 430
            ..:  |:.......:.......:|  ||| ..|:   |::|.....:..:..|...      |.|
  Rat   667 LPYVLCVAWRERLPLGGLLAVSLLSPVAFGFGCE---SLALLEEQGDGAQWHNLGTGPAEDVFSL 728

  Fly   431 IFTSA--ISSALIYFLILLAIQWRMPG--------TFLSRRIVNNRPRKQQESDTTIMYLGRAPS 485
            ...||  :..|:||.|.|..::...||        .|..||.....|...:.|     .|..||.
  Rat   729 AQVSAFLLLDAVIYGLALWYLEAVCPGQYGIPEPWNFPFRRSYWCGPGPPKSS-----VLAPAPQ 788

  Fly   486 FQN--FEFGDVGSVELMRLRHVSTSHRDSERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILA 548
            ...  .|....|.|..:.:|.:....|.|.:..|:.:::..|.|.:...|||.|:||.|.|.||:
  Rat   789 DPKVLVEEPPPGLVPGVSIRGLKKHFRGSPQPALRGLNLDFYEGHITAFLGHNGAGKTTTLSILS 853

  Fly   549 GLKFPLRGNVYIMGNPFEPNGEARR-------LVDFRFDEHGLNKHLTVEQTIDYHVRLK---LS 603
            ||..|..|:..|:|:..:.|..|.|       ..:..||      .||||:.:.::.|||   .:
  Rat   854 GLFPPSSGSASILGHDVQTNMAAIRPHLGICPQYNVLFD------MLTVEEHVWFYGRLKGVSAA 912

  Fly   604 PSESDRYEIERRKWLAILDQHVESRGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGR 668
            ..:|::..:.|...|      :..|..:...||.|..:.:::.....|.:.::|::|||..:...
  Rat   913 AIDSEQEHLIRDVGL------IPKRDTQTRHLSGGMQRKLSVAIAFVGGSRVVIMDEPTAGVDPA 971

  Fly   669 EAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVII 733
            ..:..|.::...:|.|..|::|:::.|||.:.||:.:::.|.|...|:|.|||........|.::
  Rat   972 SRRGIWELLLKYREGRTLILSTHHLDEAELLGDRVAMVASGSLCCCGSPLFLRRHLGCGYYLTLV 1036

  Fly   734 KK-------------------------------------PH----------VPDQPITDYINQFM 751
            |.                                     ||          ||..|....|.:.:
  Rat  1037 KSSQSLVTHDLKGDTEDPRREKKSGSEGKTADTVLTRDGPHRSSQVPAPDAVPVTPSAALILELV 1101

  Fly   752 QNIEPENEIGDSLTYRLPVIYRPRLQKL-----LIHLEIDRKM--LGIENVRVVGAELSDIYMTL 809
            |...|..::.:.|.:.| |:..|....|     .:..|:|:::  ||:....:....|.:|::.:
  Rat  1102 QRHVPGAQLVEELPHEL-VLALPYAGALDGSFATVFQELDQQLERLGLTGYGISDTNLEEIFLKV 1165

  Fly   810 VTSF---------RLQQQMIPDVTQTF---KYQVVSQKQLTK----------------------- 839
            |...         |.||.::....|..   :..|:...:|.|                       
  Rat  1166 VEEAHAHGEGGDPRQQQHLLTATPQPHTGPEASVLENGELAKLVLDPQAPKGSAPTTAQVQGWTL 1230

  Fly   840 --QRMRAMFYKKMI---HTAPNVWPIIMIFTSFVLIAIIARLSV--------------------- 878
              |::||:.:|:.:   .:...::..|::...||.:|:...|.|                     
  Rat  1231 TCQQLRALLHKRFLLARRSRRGLFAQIVLPALFVGLALFFTLIVPPFGQYPPLQLSPAMYGPQVS 1295

  Fly   879 --------------LLD------------------MPKERQNSIHIGFREPE---DVVKYLPN-- 906
                          ||:                  ...|..:|:...|..||   ||...|.:  
  Rat  1296 FFSEDAPADPNRMKLLEALLGEAGLQDPSVQGKGSRGSECTHSLACYFTVPEVPPDVASILASGN 1360

  Fly   907 --------------------LKDC--------------GYID---------------------IR 916
                                |.||              |:.:                     :|
  Rat  1361 WTPDSPSPACQCSQPGARRLLPDCPAGAGGPPPPQAMAGFGEVVQNLTGRNVSDFLVKTYPSLVR 1425

  Fly   917 SAVK----VNKKKSVGVSRTFDDDSFVCEKGSYRNNLRKKNELRSF------------------G 959
            ..:|    |::.:..|.|....|.    :..|.|..:|...|:|:.                  .
  Rat  1426 RGLKTKKWVDEVRYGGFSLGGRDP----DLPSGREVVRTVAEMRALLSPQPGNTLDRILNNLTQW 1486

  Fly   960 AVESDGDEHLNGYISQDMFHSAPMMLNLLQNVILRLSYPMQT-----DLVVLVENHPL------- 1012
            |:..|....|..:.:...:|:....:|...|.:||...|..:     .:..|  ||||       
  Rat  1487 ALGLDARNSLKIWFNNKGWHAMVAFVNRANNGLLRAFLPSGSVRHAHSITTL--NHPLNLTKEQL 1549

  Fly  1013 --PTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDVRFLQHMAGLGLKVFWG 1075
              .|.::..::||        |.:.|...:....:.|.:.|:||.|...:.||.::||...::|.
  Rat  1550 SEATLIASSVDVL--------VSICVVFAMSFVPASFTLVLIEERITRAKHLQLVSGLPQTLYWL 1606

  Fly  1076 INLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYEN-AIMVVLLTTFGLAALPLTYLVSMF------ 1133
            .|..||...:.|...|:|:|........:...|| ..:::||..:|.:..||.|..|.|      
  Rat  1607 GNFLWDMCNYLVAVCIVVLIFLAFQQKAYVAPENLPALLLLLLLYGWSITPLMYPASFFFSVPST 1671

  Fly  1134 -------------VNKSIVRAFLVSVL----LQGVSGLVLYIIYWDVANSNTIFFYAACMSPGFS 1181
                         :|.|:. .|::.:|    ||.||.::..:.         :.|...|:..|  
  Rat  1672 AYVVLTCINLFIGINSSMA-TFVLELLSDQNLQEVSRILKQVF---------LIFPHFCLGRG-- 1724

  Fly  1182 LLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSAL 1246
            |:|.|.|   |.:..|.                 |.:.:.:|.:..:|...|  ..:|.||....
  Rat  1725 LIDMVRN---QAMADAF-----------------ERLGDKQFQSPLRWDIIG--KNLLAMVAQGP 1767

  Fly  1247 IFLMLIFWIELHRREKKFHTSRDLRKMRTATYP---FDDGDVADVKQKIAEADNTKAKQSVFLV- 1307
            :||::...::        |.:|.|.:.::...|   .:|.||...::::.:.    |.|...|| 
  Rat  1768 LFLLITLLLQ--------HRNRLLPQPKSRLPPPLGEEDEDVVRERERVTKG----ATQGDVLVL 1820

  Fly  1308 -DQVEA----RVPAAGKRIHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGL 1367
             |..:.    |.||    :..:...:......|:.|...:||:...|.:.|....:.||..:.|.
  Rat  1821 RDLTKVYRGQRSPA----VDHLCLGIPPGECFGLLGVNGAGKTSTFRMVTGDTLPSSGEAVLAGH 1881

  Fly  1368 DFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHR 1432
            :...:..:.|..|||.||...:.:.||.|||:.|...:||||||::.:......:.|.:..:..|
  Rat  1882 NVAQEPSAAHRSMGYCPQSDAIFDLLTGREHLELFARLRGVPEAQVAQTALSGLVRLGLPSYADR 1946

  Fly  1433 KCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDEL 1497
            .....:...:.||..|||||....::.|||||.||..:.||.:||.|..:...|::::..::...
  Rat  1947 PAGTYSGGNKRKLATALALVGDPAVVFLDEPTTGMDPSARRFLWNNLLSVVREGRSVVLTSHSME 2011

  Fly  1498 ECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRD 1540
            ||:.|...:.:..:.....:||.|:|:.::..|..|.:|:..|
  Rat  2012 ECEALCTRLAIMVNGRFRCLGSAQHLKSRFGAGHTLTLRVPPD 2054

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 26/154 (17%)
ABC2_membrane_4 <293..448 CDD:289500 33/182 (18%)
EcfA2 499..717 CDD:224047 59/227 (26%)
P-loop_NTPase 500..721 CDD:304359 61/230 (27%)
ABC2_membrane_3 <972..1254 CDD:289468 69/319 (22%)
EcfA2 1307..1521 CDD:224047 59/219 (27%)
P-loop_NTPase 1324..1524 CDD:304359 55/199 (28%)
Abca7NP_997481.1 rim_protein 1..2127 CDD:130324 367/1798 (20%)
ABC2_membrane <557..742 CDD:304374 35/211 (17%)
ABC_subfamily_A 805..1024 CDD:213230 61/230 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 1044..1086 2/41 (5%)
ABC_subfamily_A 1818..2038 CDD:213230 61/223 (27%)
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite 2129..2170
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342215
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.750

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