DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca16

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_038957107.1 Gene:Abca16 / 293444 RGDID:1563534 Length:1680 Species:Rattus norvegicus


Alignment Length:1782 Identity:385/1782 - (21%)
Similarity:723/1782 - (40%) Gaps:316/1782 - (17%)


- Green bases have known domain annotations that are detailed below.


  Fly    19 LWRR----------TLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQDINI-- 71
            ||:.          |:.|::|.::.|:::                       ::...|.|:||  
  Rat    13 LWKNFTLKKRQVLSTVMEVLAALLFVIML-----------------------LIFRALTDMNIAG 54

  Fly    72 --------LTRMADSKREKTKYILAFTP-ETTFTSEVTKNVAKTLELSSTV-GYESESEMQN--- 123
                    :..|....::..::.|.:.| |....:|:.::|.:.|.::..| |:.||.|.:.   
  Rat    55 PYHFTPQPIATMPSFIKDAQEWELIYIPSEIDVVTEIIEDVKRNLNITIKVRGFPSEVEFEEYIL 119

  Fly   124 -QFDERTTLAGIVFN-DLRDDGTPLTLSIS--IRFPSEFRTIAPFLTEDRL-WITRCSGRINPG- 182
             .:..:..||.|||: |.::...||.|.:.  :||....|||   ...|:: |.||.....:|. 
  Rat   120 FDYTSQKVLAAIVFDCDFKNKTDPLPLQVKYHLRFVGAQRTI---WWPDKIGWKTRLLFPNHPSL 181

  Fly   183 --RDRAKHDKQQDIYIREGFLQLQHQI--FVEWYHQLR---------KDIVSTYPEPNVEVYNIL 234
              |:....|.....||:||||.:||.:  .:..||:.|         ..:|..:|.|:.....:|
  Rat   182 KPRNPNYLDGGSPGYIKEGFLAVQHAVDKSIMLYHESRAGKELFENIDTLVQRFPYPSHPQDKLL 246

  Fly   235 LKAADEPCSVMSVAQLPTFLYNFIYLLPF----LNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGI 295
            .         :|...:|     .:::|.|    |:|:|::..:.|..:..:|...|....:.|..
  Rat   247 W---------ISSPFIP-----LMFILMFSSIVLSIMRSIVFEKEKRLKEYQLIMGLRNWIIWMG 297

  Fly   296 KFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFV-CFITLYTVEIIITGMVVAKLFA 359
            .|...|  ...:.:|:.|.:|.|...  .|.........:|: .|:|.|.:..|....:|:..|:
  Rat   298 YFFTFF--PLYVAIIFLICILLFIQI--VEEPILRYSDCSFIFVFLTCYAIASICFAFMVSTFFS 358

  Fly   360 NPTNAVLFALMLWLFMYAAFCIILERYWDIHKYYVFFIL---VAFCNCQMHFSMSLFRNCIEKPE 421
            ....|.....:|:   :|:|.    .|..|.:||....|   :..| ...:.:::|..|.:.|.|
  Rat   359 KTRLAASAGNLLF---FASFF----PYNFISEYYGMLDLTTKITAC-LSANVALALGINILIKLE 415

  Fly   422 ----------------MVNTIDFVLIFTSAISSALIYFLILLAIQWRMPGT---------FLSRR 461
                            :.:.::|..:....:..|.:|.|:...::...||.         |:.|.
  Rat   416 IQEIGVKWDNLWTPANLEDNLNFGYMLGMLLLDAFLYSLVTWYVEAVFPGQCGVPQPWYFFIMRS 480

  Fly   462 IVNNRP--RKQQESDTTIMYLGRA----PSFQNFEFGDVGSVELMRLRHVSTSHRDSERK-ILKN 519
            ....:|  ||..|...:|..:...    ||  |.|.|       ::::|:   |::.:.| .:.|
  Rat   481 YWFGKPKIRKIGEEAKSIPVVHNCYEAEPS--NLEAG-------IQIKHL---HKEFKTKPAINN 533

  Fly   520 ISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEPN-GEARRLV------DF 577
            :|:.||.|:|.|:|||.|:||.|.|.:|.|.....||..||.|.....| .|.|:.:      |.
  Rat   534 LSLNIYEGQVTVLLGHNGAGKTTTLSVLTGRFAATRGEAYINGYNISDNMAEIRKDLGFCPQHDL 598

  Fly   578 RFDEHGLNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVESRGVRIGKLSSGSMKL 642
            .||:..|::||.      ::..:|..|...:..||.|...:..|.::..:..   |.:|.|..:.
  Rat   599 LFDDLTLSEHLF------FYCMIKGHPQNINCVEINRMLSVFNLQENYHTLS---GSVSGGVRRK 654

  Fly   643 VALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILS 707
            :::...|.|.:.::||:||::.:.....:..|.|:...|:||..::.|:.:.||:.:.|||.|:.
  Rat   655 LSIILALMGGSKVVILDEPSSGMDPMSRRATWDILQHYKQNRTILLTTHYMDEADVLGDRIAIMV 719

  Fly   708 MGVLEASGTPFFLRSKFSSSVDLVIIKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRLPVIY 772
            .|.|...|:..||:..:.:...:|:.|:|:.....|...|.|.:.....||:||:.|::.||..|
  Rat   720 RGTLHCCGSSVFLKQIYGAGYHIVLEKEPYCDVDNIIAMIQQHVPGSMLENDIGNELSFILPKKY 784

  Fly   773 RPRLQKLLIHLEIDRKMLGIENVRVVGAELSDIYM-------------TLVTSFRLQQQMIPDVT 824
            ..|.:.|...||:.:|.|||.|.......:.::::             |:...:...::|..|..
  Rat   785 VSRFETLFTELEMRQKALGIANFGASITTMEEVFLKVNKLAAPQRSIQTIQPYYLTYKKMRQDEQ 849

  Fly   825 QT-----------FKY--QVVSQK-----QLTKQRMRAMFYKKMIHTAPNVWP-------IIMIF 864
            |.           |.|  ::.:.|     .|.:|:..:||.|:.:....| |.       ::::.
  Rat   850 QNVNILRNYNKPIFPYLREIATVKFNTGVPLYRQQFYSMFIKRALFIGRN-WKLMFLQIIVVLVV 913

  Fly   865 TSFVLIAIIARLSVLL---DMPKERQNSIHIGFREPEDVVKYLPNLKDCGYIDIRSAVKVNKKKS 926
            |:::|      ||:.|   |:|:...|..|.|    :.:|.|        .|...|.:.:|..|:
  Rat   914 TTYLL------LSLHLDDNDIPERELNLSHYG----KTIVPY--------SISGNSDLALNLIKN 960

  Fly   927 VGVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVE-----SDGDEHLNGYISQDMFHSAPMMLN 986
            :.:.....:.|....||...|.:.:..:.|:|..:.     ......|..:.:.:.:||..:.|:
  Rat   961 LKIFLKSKNQSLKKIKGDMNNYILENKDCRTFCIIALSIKVERNKTVLTIFFNNEAYHSPAISLS 1025

  Fly   987 LLQNVILRLSYPMQTDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCI---IPLTVSVFV 1048
            :|.|::..........:....:..|||...|..:.|  |.:.      :|.|:   |.:.|..|.
  Rat  1026 ILDNILFMTLSGRDASITAFNKPQPLPHYGSNTVPV--NGLQ------IVQCLAFGISVVVGSFS 1082

  Fly  1049 IPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYENAIMV 1113
            |..|.|.|...:.:|.:.|:.:..:|...|..|...||....:::.|.....:..|..:.|.:..
  Rat  1083 IQTVTERISQAKHIQFLTGVCVLTYWLSALLCDLIFFFFACCVLLGIFRFCQLEAFVVHYNFLDT 1147

  Fly  1114 VLL-TTFGLAALPLTYLVSMFVNKSIVRAFLVSVLLQGVSGLVLYIIYWDVANSNTIFFYA---- 1173
            :|: ..:|...:|||||.|...|.| ..|::...|....|.:...|||      ..:.||.    
  Rat  1148 ILIFMLYGWCVVPLTYLGSFLFNSS-TAAYIKITLFNYFSTMFSIIIY------TIVQFYGEDFP 1205

  Fly  1174 ----------ACMSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCK----FD 1224
                      ....|.::|...:|..:          |..|....|..| ...:..:|.    .:
  Rat  1206 ALIHILIKTILMALPSYNLAMSISKYF----------DDYEVKRLCARE-FRSIYMDCSEPFIQN 1259

  Fly  1225 TFFKWAAPGILPPILYMVLSALIFLMLIFWIELHRREKK--------FHTSRDLRKMR-----TA 1276
            ..:.:...||...::.:....|:||:|:..:|......|        |:....:||.|     .:
  Rat  1260 NVYGFGEHGIGKFLITLATMGLVFLLLLLSLESVSSSLKNFVFRNVLFYFYNKIRKGRHGVHSKS 1324

  Fly  1277 TYPFDDGDVADVKQKI----AEADNTKAKQSVFLVDQVEARVPAAGKRIHTVSFALNKYMSMGIF 1337
            |...:|.|:...|:|:    ....||....:.  |.::..:.|.. |.:..:|..:.|....|:.
  Rat  1325 TKEDEDEDIRKEKRKVFTLLLRLQNTPLVLNE--VTKIYFKCPVV-KAVKNISLVVRKSECFGLL 1386

  Fly  1338 GPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLL 1402
            |...:||:...:.|.|:.....|..::.|.....:...|.:.:||.||...:||.:|.||.:.:.
  Rat  1387 GLNGAGKTTTFKMLTGEETITSGIAFIDGNSVTKNPRKIRSRIGYCPQSESVLNHMTGRESLIMY 1451

  Fly  1403 CMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGM 1467
            ..:.||||..|.|.:......:::.....:.....:|..:.:|..|:||:..:.::.||||:.||
  Rat  1452 ARLWGVPEQDINEYVEAFLHSVHLEPIADQIIYTYSAGSKRRLSTAIALMGKSSVVFLDEPSTGM 1516

  Fly  1468 PATTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFY 1532
            ....:..:|:.:.::...||.||..::...||:.|...:.:....:...:|:.|::|.::...:.
  Rat  1517 DPVAQHLLWDTVTWVCKTGKAIIITSHRMEECEALCSRLAIMVKGKFTCLGTPQHVRKRFGQVYT 1581

  Fly  1533 LEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRL-----NNWFKFYVPVGHIVYSF 1592
            |.|::            |:.||.|.:.:|.:|:  :|...|.:     :....:|:|...|.:..
  Rat  1582 LTVKI------------NIAKDEEKVKEFKDFI--KSTFPGNIKFQEFHGTIGYYIPSTEICWGK 1632

  Fly  1593 LYGAMEKNKLRLNVSDYCIYQADMMSV 1619
            ::..:|:.|:...:.||.:.|..:..:
  Rat  1633 VFEILEEAKVLFKLEDYSVKQVTLEQI 1659

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 28/137 (20%)
ABC2_membrane_4 <293..448 CDD:289500 33/174 (19%)
EcfA2 499..717 CDD:224047 64/225 (28%)
P-loop_NTPase 500..721 CDD:304359 65/228 (29%)
ABC2_membrane_3 <972..1254 CDD:289468 62/303 (20%)
EcfA2 1307..1521 CDD:224047 49/213 (23%)
P-loop_NTPase 1324..1524 CDD:304359 47/199 (24%)
Abca16XP_038957107.1 rim_protein <163..1664 CDD:130324 349/1606 (22%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342247
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.950

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