DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca15

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_001099763.2 Gene:Abca15 / 293442 RGDID:1305981 Length:1668 Species:Rattus norvegicus


Alignment Length:1802 Identity:386/1802 - (21%)
Similarity:732/1802 - (40%) Gaps:331/1802 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly     2 PASKGLLFKRYIRIELNLW------RRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQS 60
            ||||.||        |.||      ||....:|..:|::|...:        :|.||      :.
  Rat     4 PASKKLL--------LLLWKNFTLKRRKFGALVTEIILMLAFSI--------VLLTT------RH 46

  Fly    61 IVS-HKLQDINILTR-----------MADSKREKTKYILAFTPET-TFTSEVTKNVAKTLEL-SS 111
            ::| :|::.::...:           .|:|.|   .:.||:.|.. |....:.:||.|.|.. .:
  Rat    47 LLSINKMESLHFPDQPVGAVPFFFRVSANSSR---PWELAYVPSNITVVHNIVENVKKDLNFPMA 108

  Fly   112 TVGYESESEMQ----NQFDERTTLAGIVFN----DLRDDGTPLTLSISIRFPSEFRTI-APFLTE 167
            .:|:.|||:.:    :..:.|..||.|||:    :.||. .|..:..::||....:.| .....:
  Rat   109 VIGFPSESDFEDYARSSVNSRNILAAIVFDHNFANSRDP-LPKKIKYNLRFSDIKKNIHGMAYYQ 172

  Fly   168 DRLWIT-------RCSGRINPGRDRAKHDKQQDIYIREGFLQLQHQI--FVEWYH------QLRK 217
            ...|:|       |..|..||    .:.|.....||.||||.:||.:  .:..:|      .|..
  Rat   173 GHTWLTKFLFPPLRIVGPRNP----QEADGGSPGYITEGFLAVQHALDKAIMLHHGGAAATALFN 233

  Fly   218 DI---VSTYPEPNVEVYN---ILLKAADEPCSVMSVAQLPTFLYNFIYLLPFLNIIRNVAAQVED 276
            |:   :..:|.|  ..|:   .|......|.:|.|           |:.|..|.::.::..:.|:
  Rat   234 DVSLFIQRFPYP--AYYHDHFYLFANTFVPLTVAS-----------IFFLNHLILVWSIVWEKEN 285

  Fly   277 GVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIMLLAFWGFGGREGE--FSGTGTIAFVCF 339
            .:..:|...|....|.| |.:...|..:..:.:|:..::|    |...:..  |.....|.....
  Rat   286 RLKEYQLMIGLRNWMFW-IAYFFTFFCLYFINIIFMCIVL----FVKIDPAPIFQYNDPILVFIL 345

  Fly   340 ITLYTVEIIITGMVVAKLFANPTNAVLFALMLWLFMYAAFCIIL----------------ERYWD 388
            :..|.:..|....:::.||    |.|.||:.|..|::  |...|                :..|.
  Rat   346 LLFYAISSIFFSFMISTLF----NRVSFAVSLGSFLF--FLTYLPAITMNQSFEHMPPRQKLIWS 404

  Fly   389 IHKYYVFFILVAF-----CNCQMHFSMSLFRNCIEKPEMVNTIDFVLIFTSAISSALIYFLILLA 448
                :.|.:.:||     .|.:...:...:.| |..|...:::.|..:....:..|.||.|:...
  Rat   405 ----FDFNVGMAFGFRFLVNAETRKTGMKWNN-IFLPTDSDSLLFTYVLGMLLVDAFIYGLVAWY 464

  Fly   449 IQWRMPGT---------FLSRRIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGDVGSVELMRLRH 504
            |:...||.         ||.........|:|:...|  .:..|..| :.||.........::::|
  Rat   465 IEAVFPGEYGVPKPWNFFLMHSYWFGESRQQKPEIT--QFCKRVES-KYFEVEPTDLTAGIQIKH 526

  Fly   505 VSTSHRDSE--RKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEP 567
            :....:::.  :..:.::|:.:|.|::.|:|||.|:||.|.|.||:||..|..|..|:.|.....
  Rat   527 LHKVFQENNITKVAINDLSLNVYEGQITVLLGHNGAGKSTTLSILSGLYPPTSGEAYVHGEDISQ 591

  Fly   568 N-GEARRLVDFRFDEHGLNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVESRGVR 631
            : .:.|..:.....::.|..||||.:.:.::.|:|..|....   :|....:.......|.|...
  Rat   592 HMDQIRNFLGLCPQQNLLFDHLTVSEHLYFYCRVKGVPQNMC---LEETNNMLSAFNLTEKRDAF 653

  Fly   632 IGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEA 696
            ...||.|..:.:|:...|.|.:.::||:|||:.:.....:..|.:|...|:||..::.|:.:.||
  Rat   654 SKSLSGGMKRKLAIIIALIGGSKVVILDEPTSGMDPASRRSTWDVVQTYKQNRTILLTTHYMDEA 718

  Fly   697 EHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKKPHVPDQPITDYINQFMQNIEPENEIG 761
            :.:.|||.|:..|.|...|:..||:..:.....:|::|:|......|:..|:.::.....:..:|
  Rat   719 DMLGDRIAIMVQGTLRCCGSSVFLKRLYGVGSHIVMVKEPVCDVDEISKLIHYYIPTATLKTNVG 783

  Fly   762 DSLTYRLPVIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSDIYMTLVTSFRLQQQMIPDVTQT 826
            :.|::.||..|..:.:.||..||.:::.|||.:..:....:.::::.:    ...:...||:..|
  Rat   784 NELSFILPKEYTHKFEALLTALEENQENLGISSFGMSITTMEEVFLRV----SKMEDSKPDMEAT 844

  Fly   827 ----------------------FKYQVVSQK-------QLTKQRMRAMFYKKMIHTAPNVWPII- 861
                                  |..|...|.       .|..|:..|||.|::::...| |.:: 
  Rat   845 QSPSAGSKGNRNRDVESSMRAGFPTQSEDQTIVFNTGCPLYLQQFHAMFMKRLMYNWRN-WRVLS 908

  Fly   862 -----MIFTSFVLI-------------------------AIIARLSVLLDMPKERQNSIHIG--- 893
                 ::.::|:|:                         :|:.:.::...:....:|.:..|   
  Rat   909 VQILGLVISTFLLLKSHEFRHKRIRQMNLDDYGQTIVPFSILGKSNLTTSLLIHLENMLKPGNHQ 973

  Fly   894 FREPE-DVVKYLPNLKDCGYIDIRSAVKVNKKKSVGVSRTFDDDSFVCEKGSYRNNLRKKNELRS 957
            .:|.: |::|||...::|.::.|   |.::.|.:.|.::                          
  Rat   974 LKEVQGDLLKYLEGNEECIHLCI---VALSIKVAAGRAK-------------------------- 1009

  Fly   958 FGAVESDGDEHLNGYISQDMFHSAPMMLNLLQNVILRLSYPMQTDLVVLVENHPLPTQLSQKINV 1022
                       |....:.:.:||..:.|.:|.|::..........:.|..:..|.||......:.
  Rat  1010 -----------LTVLFNNEAYHSPSLSLAVLDNILFMSLSGANASITVFHKPQPRPTSKEWPRST 1063

  Fly  1023 LDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFV 1087
            . .||....:.|.:.    |.||.|.|..|.|.|...:.:|.::|..:.|:|...|.:|:..||:
  Rat  1064 Y-GKIVAFKIQLGMA----LLVSGFCILTVTERITKAKHMQFLSGASVLVYWLSALVFDFIIFFI 1123

  Fly  1088 YSVIIVVIMSLMGIGGFGFYENAIMV---------VLLTTFGLAALPLTYLVSMFVNKSIVR--A 1141
            ....::|:        |.:|:..|.|         ::|..||.:|:|||||:|...:|||..  .
  Rat  1124 SCCFLLVM--------FKYYKIDIYVTDYHILETMLILILFGWSAIPLTYLMSFLFSKSIPAYIQ 1180

  Fly  1142 FLVSVLLQGVSGLVLYIIY-----WDVANSNTIFFYAACM-SPGFSLLDGVSNVYAQNLEQAICI 1200
            .||...|.|.|||::..|.     ..::||...|..::.: .|.::|...:|........:.:||
  Rat  1181 LLVFYYLSGTSGLLIDTIIEAGLSTIISNSTQTFLLSSLLFFPTYNLGKCISEYTVIYQRKILCI 1245

  Fly  1201 DKCEATD--SCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSALIFLMLIFWIE------- 1256
            .:.....  :|::|...:.:.:.|        .|.|...::.|.::..::|:.||:.|       
  Rat  1246 QQKNVLKYLNCSKEYTKKNIYSLK--------KPMIGKYLIAMSIAGFVYLLFIFFWENISWKLR 1302

  Fly  1257 --LHRRE-----KKFHTSRDLRKMRTATYPFDDGDVADVKQKIAEADNTKAKQSVFL--VDQVEA 1312
              :|:..     ||:.:.....::...:   :|.||.:.:::|...........|.:  :.::..
  Rat  1303 MLIHQHIYFGVCKKYKSDIISNELSGTS---EDNDVENERREILYQPEKFLNCPVLIKQLTKIYF 1364

  Fly  1313 RVPAAGKRIHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIH 1377
            :.|.. ..:..:|.|:.:....|:.|...:||:...:.|.|:.....|::::.|:....|:..:.
  Rat  1365 KSPLI-LAVKNISLAIQERECFGLLGFNGAGKTTTFQILTGEITPTAGDVFIDGISITKDVLKVR 1428

  Fly  1378 TYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKR 1442
            :.:||.||...||..||..|.:.:...|.|:.|.:|...::.....|.:....:...|..:...:
  Rat  1429 SKIGYCPQFDALLEYLTGWEIMVMYARIWGISERQIRPYVNTYLNSLELEPHANSLISTYSEGNK 1493

  Fly  1443 HKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDELECKILADFII 1507
            .:|..|:|::....::.||||:.||....||.:|:.:..||..||.||..::...||:.|...:.
  Rat  1494 RRLSTAIAMMGKPSVIFLDEPSTGMDPRARRLLWDAVIKIRESGKAIIITSHSMEECEALCTRLS 1558

  Fly  1508 LFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELV 1572
            :....::..:||.|||:.|:...:.|:.: ::.|.||        |:.:|   |:......|||.
  Rat  1559 IMVHGKLTCLGSPQYLKNKFGDIYILKTK-VKSGETL--------KEFKN---FITLTFPGSELK 1611

  Fly  1573 GRLNNWFKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSV 1619
            ........:|:|.....:..::|.:||.|.:.::.||.|.|..:..|
  Rat  1612 QENQGILNYYIPSKDNSWGKVFGILEKAKEQYDLEDYSISQITLDQV 1658

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 26/134 (19%)
ABC2_membrane_4 <293..448 CDD:289500 33/177 (19%)
EcfA2 499..717 CDD:224047 59/220 (27%)
P-loop_NTPase 500..721 CDD:304359 60/223 (27%)
ABC2_membrane_3 <972..1254 CDD:289468 70/300 (23%)
EcfA2 1307..1521 CDD:224047 50/213 (23%)
P-loop_NTPase 1324..1524 CDD:304359 51/199 (26%)
Abca15NP_001099763.2 ABC2_membrane_3 <255..464 CDD:289468 43/235 (18%)
CcmA 522..834 CDD:224054 78/318 (25%)
ABC_subfamily_A 522..743 CDD:213230 60/223 (27%)
ABC2_membrane_3 <1007..1195 CDD:289468 54/237 (23%)
ABC_subfamily_A 1354..1575 CDD:213230 53/221 (24%)
drrA 1369..1662 CDD:130256 74/303 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342244
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 1 1.100 - - O PTHR19229
Phylome 1 0.910 - -
SonicParanoid 1 1.000 - - X215
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
76.850

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