DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca9

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_038943368.1 Gene:Abca9 / 287788 RGDID:1305931 Length:1653 Species:Rattus norvegicus


Alignment Length:1835 Identity:347/1835 - (18%)
Similarity:692/1835 - (37%) Gaps:431/1835 - (23%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLFKRYIRIELNLWRRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQDINI 71
            ||.|.::| :..:.|.||.|.:...:::|            |.|..:.|       .|::.|...
  Rat    45 LLCKNWLR-KFRMRRETLLEWLLSFLLIL------------LAYQLSSN-------LHQVHDAPE 89

  Fly    72 LTRMADSKR----EKTKYILAFTPETTFTSEVTKNVAKT---LELSSTVGYESESEMQN-QFDER 128
            :: |.|..|    ..:.||:.|.||:..|.|: .|:|..   ::..:.|....||.|.. ..:..
  Rat    90 MS-MMDLGRVDDFNDSNYIIVFAPESETTHEI-MNIAALAPFMKGRTIVACPDESSMSELNLNYS 152

  Fly   129 TTLAGIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDRAKHDK--- 190
            .....::|.|        |.|..::|.               |    ..||...::...|..   
  Rat   153 IDAVRVIFKD--------TFSYHLKFS---------------W----GQRIPKTKEHKDHTAPCE 190

  Fly   191 --------QQDIYIREGFLQLQHQ-----IFVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPC 242
                    :..::..:||:..|..     |.|...|.:.::::|...                  
  Rat   191 PFKNKMVCENSVFWEKGFVAFQTAINAGIIEVTTNHSVMEELMSVIG------------------ 237

  Fly   243 SVMS----VAQ--LPTFLYNFIYLLPFLNIIRNVAAQVED------GVMVHQWHYGYSFGMQWGI 295
            |||.    :||  :.|..:.|..::.|.:.|..::..|..      .:|........:|.:.||:
  Rat   238 SVMKMQPFIAQGGVATDFFIFFCVISFSSFIYYLSVNVTQERQSITTLMAMMGLRESAFWLSWGL 302

  Fly   296 KF--LVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLF 358
            .:  .:|.:...:..::.:..::...||           .:.|:.|: ||.:.:|....:::.|.
  Rat   303 MYAGFILVVATLMSLIVKSTQVVVLTGF-----------MVVFLLFL-LYGLSLITLSFLMSVLL 355

  Fly   359 ANPTNAVLFALMLWLF--------MYAAFCIILERYWDIHKYYVFFILVAFCNCQ---MHFSMSL 412
            ..|....|...:|.:|        :|......:|  |.:    .|....||.|..   :|....:
  Rat   356 KKPFLTGLAVFLLTVFWGSLGFTALYKHLPAFME--WIL----CFLSPFAFINGMAQLIHLDYDV 414

  Fly   413 FRNC-IEKPE---MVNTIDFVLIFTSAISSAL-IYFLILLAIQW---RMPGTFLSRRIVNNRPRK 469
            ..|. :..|.   ::....|:|:..:.:..|| :||..:|..::   |.|..||.......|   
  Rat   415 NSNVNLNSPNNSYLILATLFMLVLDALLYLALALYFDKILLSKYGHQRSPLFFLKSSYWFQR--- 476

  Fly   470 QQESDTTIM--YLGRAPSFQNF------EFGDVGSVELMRLRHVSTSHRDSERKILKNISMRIYR 526
             :.:|..::  .:..|||..:.      ||....::.:..||...|. :..:.:.|:.:...||.
  Rat   477 -RGADHVVLENEIDSAPSLNDSLEPVSPEFQGKEAIRIKNLRKEYTG-KHGKVEALRGLGFDIYE 539

  Fly   527 GEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEPNGEARRL-----------VDFRFD 580
            |::..:|||.|:||.||:..|:||..|..|::.|.........::..:           :.|.| 
  Rat   540 GQITALLGHSGAGKTTLINTLSGLSPPTTGSITIYNQTVSETEDSYAVPKLTGVCPQSNIQFGF- 603

  Fly   581 EHGLNKHLTVEQTIDYHVRLK-LSPSESDRYEIERRKWLAILDQHVES-RGVRIGKLSSGSMKLV 643
                   |||::.:....::| :.|.     |:|:.....:.|..:|: :......||.|..:.:
  Rat   604 -------LTVQENLRLFAKIKGILPQ-----EVEQEVRQVLRDLEMENIQDTLAQNLSGGQKRKL 656

  Fly   644 ALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSM 708
            .....:.||..:::|:|||..|........|:::...:..|..:.:|..:.||:.:|||...:|.
  Rat   657 TFGIAILGDPQVLLLDEPTAGLDPLSRHHIWNLLKERRSGRVIVFSTQFMDEADILADRKVFISN 721

  Fly   709 GVLEASGTPFFLRSKFSSSVDLVI-------------IKKPHVPDQPITDYINQFMQNIEPENEI 760
            |.|..:|:..||:.|:.....|.:             :.|.|:||..:|...::.:..|.|... 
  Rat   722 GRLRCAGSSLFLKKKWGIGYHLSLHLNETCDPESITSLVKKHIPDARLTAQSDEQLVYILPLER- 785

  Fly   761 GDSLTYRLPVIYRPRLQKLLIHLEIDR-KMLGIENVRVVGAELSDIYMTLV-----------TSF 813
                |.:.|.:||          ::|| ...|||:..|....|:::::.|.           ...
  Rat   786 ----TNKFPDLYR----------DLDRCSNHGIEDYDVSMTTLNEVFLKLEGKSMAEEPDAGVCG 836

  Fly   814 RLQQQMIPDVTQTFKYQ----------VVSQKQLTKQRMRAMF---YKKMIHTAPNVWPIIMIF- 864
            ||......||....:.:          .||...|.:|::.|:.   :.|:.:...::..::::| 
  Rat   837 RLLSDGAKDVESLVELERVLPLDSSGSSVSGMALWRQQLCAVAKVRFLKLKNERRSLMTMLLLFG 901

  Fly   865 TSFVLIAIIARLSVLLDMPKERQNSIHIGFRE------------------PEDVVKYLPNLKDCG 911
            .|||              |:..::.::..:.:                  |:|.:.:|..:...|
  Rat   902 ISFV--------------PQLLEHLVYKVYHKSYSWGLSPSMYFLSPGQLPQDPLTHLLVINKTG 952

  Fly   912 YIDIRSAVK--VNKKKSVGVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYIS 974
                 |::.  ::..:..|::  .|.|:.....|        |.|....|||...|||       
  Rat   953 -----SSIDNFIHSLRQQGIA--LDVDALGTRNG--------KEEALYNGAVTVLGDE------- 995

  Fly   975 QDMFHSA----------PMMLNLLQNVILRL---SYPMQTDLVVLVENHPLPTQLSQKINVLDNK 1026
            :|:..|.          |::.::|.|.:|.:   |..:|||...:.|:|.|     .:...:.| 
  Rat   996 KDLRFSVACNAKRLNCFPVLADILSNGLLGIFNSSERIQTDRSTVFEDHML-----YEYGFMSN- 1054

  Fly  1027 IAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDVRFLQHM--AGLGLKVFWGINLFWDWFTFFVYS 1089
             |...:| |...:.|      .|.:.....:..:.|..:  :||....:|......|...:|   
  Rat  1055 -AFFWIP-VAASLTP------YIAMGSISDHKKKVLSQLWTSGLYPSAYWCGQALVDIPIYF--- 1108

  Fly  1090 VIIVVIMSLMGIGGFGFYE-----NAIMVVLLTTFGLAA--LPLTYLVSMFV------NKSIVRA 1141
             :|:::|.:|. ..|...|     .::::.:..:.|.|:  :.|||::| ||      |..|...
  Rat  1109 -LILLLMQIMD-SVFSSEEIMSVIESLLIQIPCSIGYASSLIFLTYVIS-FVFRNGRKNSGIWSF 1170

  Fly  1142 FLVSVLLQGVSGLVLYIIYWDVANSNTI-FFYAACMSPGFSLLDGVSNVYAQNLEQAICIDKCEA 1205
            |.:.|       .:.:|:..|:.....: ..:...:.|.|:|: |...::::     :..|..:.
  Rat  1171 FFLIV-------TIFFIVATDINEYGFLQLLFCTLLIPPFTLI-GSLLIFSE-----VSYDSVDY 1222

  Fly  1206 TDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSALIFLMLIFWIELHRREKK------F 1264
            ..| :|..:                   :...:|...|..|:|..::..:|.:.|:|.      |
  Rat  1223 LGS-SESQL-------------------VFLALLIPYLHFLLFFFILRCLERYIRKKTLRVDPVF 1267

  Fly  1265 HTSRDLRKMRTATYPFDDGDV-ADVKQKIAEADNTKAKQSVFLVDQVEARVPAAGKRIHTV---- 1324
            ..|.  |..|....|.|.|:. .||:.   |...|....:...:|:....:.:..::.:||    
  Rat  1268 RISP--RSCRAFPNPEDPGEEDEDVQM---ERVRTSGAMTTPQMDEKPVIIASCLRKEYTVKTKR 1327

  Fly  1325 --------------SFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLES 1375
                          ||.:.|...:|:.|...:|||..:..:.|......|:::::|......|  
  Rat  1328 CFSKTKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGDTVPTAGQVFLKGSSGSAAL-- 1390

  Fly  1376 IHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAE 1440
              .::||.||...|...||.:||:.:...::|:.:.:....:..|...|.:...:......|:..
  Rat  1391 --GFLGYCPQENVLWPNLTVKEHLEVYAAVKGLRKKEAIVTITRLVNALKLQDQLKALVKTLSEG 1453

  Fly  1441 KRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILR-YIRYCGKTIIFATNDELECKILAD 1504
            .:.||...|:::....:::||||:.||....::::|..:| ......:..:..|:...|.:.:.|
  Rat  1454 VKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIRATFTNTERGALLTTHYMAEAEAVCD 1518

  Fly  1505 FIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRS 1569
            .:.:.....:..|||:|:|:.|:...:.||::|.......:.:.|.||            |..::
  Rat  1519 RVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKLKTPALVESLNTEILR------------LFPQA 1571

  Fly  1570 ELVGRLNNWFKFYVPVGHI-VYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQV---------- 1623
            ....|.::...:.:||..: ..|..:..:|:.|...::.:|.:.|:.:..|..::          
  Rat  1572 ARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDLEEYSLSQSTLEQVFLELSKEQELGDFD 1636

  Fly  1624 QETRAQLKHHLVQTE 1638
            :|..:.:|..|:..|
  Rat  1637 EEGSSSVKWKLLPQE 1651

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 25/154 (16%)
ABC2_membrane_4 <293..448 CDD:289500 31/172 (18%)
EcfA2 499..717 CDD:224047 54/230 (23%)
P-loop_NTPase 500..721 CDD:304359 55/233 (24%)
ABC2_membrane_3 <972..1254 CDD:289468 55/310 (18%)
EcfA2 1307..1521 CDD:224047 45/232 (19%)
P-loop_NTPase 1324..1524 CDD:304359 44/218 (20%)
Abca9XP_038943368.1 rim_protein <207..1630 CDD:130324 304/1601 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342259
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

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