DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca5

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_775429.1 Gene:Abca5 / 286970 RGDID:628661 Length:1642 Species:Rattus norvegicus


Alignment Length:1793 Identity:362/1793 - (20%)
Similarity:707/1793 - (39%) Gaps:355/1793 - (19%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKGLLFKRYI---RIELNLWRRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHK 65
            ::.||.|.|:   |.:.:..:..||.:..|..::|:..::|           .:...|.|.:...
  Rat    14 TRTLLLKNYLVKCRTKKSSVQEILFPLFFLFWLILISMMHP-----------NKKYEEVSDIELS 67

  Fly    66 LQDINILTRMADSKREKTKYILAFTPETTFTSEVTKNVA--KTLELSSTVGYESESE-MQNQFDE 127
            ..|.:||:.:          ||.:||.|..||.|.:.|:  ...::..|..|.||.| :.:...:
  Rat    68 PMDKSILSNL----------ILGYTPVTNTTSSVMQRVSTDHLPDVLVTEEYASEKELLASSLSK 122

  Fly   128 RTTLAGIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDRAKHDKQQ 192
            .:...|:||.|:        :|..:||..:...::....:.|   ..||...:..:         
  Rat   123 PSNFVGVVFKDV--------MSYELRFFPDMVPVSSVYMDSR---AGCSKSCDAAQ--------- 167

  Fly   193 DIYIREGFLQLQHQIFVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSVAQLPTF---- 253
              |...||..||..|          |......:.||.::..|...........:|.::.||    
  Rat   168 --YWSSGFTALQASI----------DAAIIQLKTNVSLWRELESTKAVIMGEAAVVEIDTFPRGV 220

  Fly   254 --LYNFIYLLPF-----LNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFL-VLFLRMCILGVI 310
              :|..|...||     ::|:.....::::.:.:...| ..:|.:.|.:.:. ::||...::.||
  Rat   221 ILIYLVIAFSPFGYFLAIHIVAEKEKRLKEFLKIMGLH-DTAFWLSWVLLYTSLIFLMSLLMAVI 284

  Fly   311 YTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTN-AVLFALMLWLF 374
            .|...|           |..:.:|.......||.:..:...:::..||....: .|:...:..:|
  Rat   285 ATASSL-----------FPQSSSIVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGVVEFFVTVVF 338

  Fly   375 MYAAFCIILERYWDIHKYYVFFILVAFCNCQ--------MHF----SMSLFRNCIEKPEMVNTID 427
            .:....|:|...:.....::|..|   |.|.        ||.    ..:||.:..|.|     ..
  Rat   339 GFVGLLIVLVESFPRSLVWLFSPL---CQCAFLIGIAQVMHLEDFNEGALFSSLTEGP-----YP 395

  Fly   428 FVLIFTSAISSALIYFLILLAIQWRMPGTFLSRRIVNNRPRKQQESDTTIMYLGRAPSF-----Q 487
            .::..|.....::.|.|:.:.:...:||.|..||             :::.:|  .||:     :
  Rat   396 LIITLTMLALDSVFYALLAVYLDQVIPGEFGLRR-------------SSLYFL--KPSYWSKNKR 445

  Fly   488 NFEFGDVGSV--------------------ELMRLRHVSTSHRDSERKI--LKNISMRIYRGEVF 530
            |::....|::                    |.:|:..:..::|.....:  |:|:|..||.|::.
  Rat   446 NYKELSEGNINGNISLNEIVEPVSSEFIGKEAIRISGIQKAYRKKNETVEALRNLSFDIYEGQIT 510

  Fly   531 VILGHIGSGKLTLLRILAGLKFPLRGNVYIMG---NPFEPNGEARRLV------DFRFDEHGLNK 586
            .:|||.|:||.||:.||.||..|..|...|.|   :..:...|||:::      |..||.     
  Rat   511 ALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHRVSEIDEMFEARKMIGICPQSDMNFDV----- 570

  Fly   587 HLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVES-RGVRIGKLSSGSMKLVALCCCLA 650
             ||||:.:.....:|..|:.:...|:::    .:||..::: :..:..|||.|..:.::|...:.
  Rat   571 -LTVEENLSILASVKGIPANNIIQEVQK----VLLDLDMQAIKDNQAKKLSGGQKRKLSLGIAVL 630

  Fly   651 GDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASG 715
            |:..|::|:|||..:......|.|:::...|.||..:.:|:.:.||:.:|||..::|.|:|:..|
  Rat   631 GNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLKCVG 695

  Fly   716 TPFFLRSKFSSSVDLVIIKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRLPVIYRPRLQKLL 780
            :..||:||:.....|.:....:...:.::..:.|.:.......:....:.|.||.....:...|.
  Rat   696 SSIFLKSKWGIGYRLSMYIDRYCATESLSSLVRQHIPAAALLQQNDQQIVYSLPFKDMDKFSGLF 760

  Fly   781 IHLEIDRKMLGIENVRVVGAELSDIYMTLVT------------------------SFRLQQQMIP 821
            ..|:| ...||:.:..|....|.|:::.|..                        ||...:|.:.
  Rat   761 SALDI-HSNLGVISYGVSMTTLEDVFLKLEVEAEIDQADYSVFTQQPREEETDSKSFDEMEQSLL 824

  Fly   822 DVTQTFKYQVVSQKQLTKQRMRAM---FYKKMIHTAPNVWPIIMIFTSFVLIAIIARLSVLLDMP 883
            .:::| |..:||...|.||::..:   .:..:...:.:|..::::...|..:.|...|       
  Rat   825 ILSET-KASLVSTMSLWKQQVSTIAKFHFLSLKRESKSVRSVLLLLLIFFAVQIFMFL------- 881

  Fly   884 KERQNSIHIGFREPEDVVKYLPNL-------KDCGY-----------IDIRSAVKVNKKKSVGVS 930
                  :|..|:.....:|.:|:|       |...|           .||...:....::::.|:
  Rat   882 ------VHHSFKNAVVPIKLVPDLYFLKPGDKPHKYKTSLLLQNSTDSDINDLIDFFTQQNIIVA 940

  Fly   931 RTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYISQDMFHSAPMMLNLLQNVILRL 995
             .|:|..:|          .......:...|:|:.|.......:..|.:|.|:|:|::.|..|  
  Rat   941 -MFNDSDYV----------SAAPHSAALNVVQSEKDYVFTAVFNSTMVYSLPVMMNIISNYYL-- 992

  Fly   996 SYPMQ-TDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDV 1059
             |.:. ||.:.:     ..|...|:|..:..|:.......::|.|:......|.:...|......
  Rat   993 -YHLNVTDTIQI-----WSTPFIQEITDIVFKVELYFQAALLGIIVTAMPPYFAMENAENHKIKA 1051

  Fly  1060 RFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGI-GGFGFYENAIMVVL--LTTFGL 1121
            .....::||....:|......|...|||  |:.:::.||... .|..||....:.|:  |..:..
  Rat  1052 YTQLKLSGLLPSAYWIGQAVVDIPLFFV--VLTLMLGSLFAFHHGLYFYPVKFLAVVFCLIAYVP 1114

  Fly  1122 AALPLTYLVSMFVNKSIVR-----AFLVSV---LLQGVSGLVLYIIYWDVANSNTIFFYAACMS- 1177
            :.:..||:.| |..|.|:.     :|:.||   ....|:.:..::.|...|    :|.|..|:: 
  Rat  1115 SVILFTYIAS-FTFKKILNTKEFWSFIYSVTALACVAVTEITFFLGYGVTA----VFHYTFCIAI 1174

  Fly  1178 PGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMV 1242
            |.:.||..:.:....:.:.   |.|.|                   :.:..|.          .:
  Rat  1175 PIYPLLGCLISFIKGSWKN---IPKTE-------------------NAYNPWD----------RL 1207

  Fly  1243 LSALI--FLMLIFWIELHRREKKFHTSRDLRK-------MRTATY------PFDDGDVADVKQKI 1292
            |.|:|  :|..:.||.|.:..:|.|..|.:||       .:.|.:      |.::.:..|||   
  Rat  1208 LVAVIMPYLQCVLWIFLLQHYEKKHGGRSIRKDPLFRALSQKAKHKKFPEPPINEDEDEDVK--- 1269

  Fly  1293 AEADNTKAKQ----------SVFLVDQVEARVPAAGKRIHT----------VSFALNKYMSMGIF 1337
              |:..|.|:          ...:|..:..........:|:          |||.:.|...:|:.
  Rat  1270 --AERLKVKELMGCQCCEEKPAIMVYNLHKEYDDKKDFLHSRKTTKVATKYVSFCVKKGEILGLL 1332

  Fly  1338 GPRNSGKSHLMRQLVGQRGFAFGEIYV--RGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIR 1400
            ||..:|||.::..|||......|:|::  .|.....|.||... |||.||...|..::|.:||..
  Rat  1333 GPNGAGKSTIINILVGDVEPTSGKIFLGDYGSHSNEDDESTKC-MGYCPQTNPLWPDITLQEHFE 1396

  Fly  1401 LLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTC 1465
            :...::|:....:.|.:..:...|::...:.:....|.|..:.||..||:::...::.:||||:.
  Rat  1397 IYGAVKGMSSGDMKEVISRITKALDLKEHLQKTVKKLPAGIKRKLCFALSMLGNPQVTLLDEPST 1461

  Fly  1466 GMPATTRREIWNILR-YIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSH 1529
            ||....::.:|..:| ..:...:..:..|:...|.:.:.|.:.:....::..||::|:|:.|:..
  Rat  1462 GMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQLRCIGTVQHLKSKFGK 1526

  Fly  1530 GFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVP---VGHIVYS 1591
            |::||::| :|..      |||  :::.|.:.:.::...:......::...:.:|   |..:..|
  Rat  1527 GYFLEIKL-KDWI------ENL--EIDRLQREIQYIFPNASRQESFSSILAYKIPKEDVQSLSQS 1582

  Fly  1592 FLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQ 1629
            |  ..:|:.|....:.:|...||.:..|..::.:.:.:
  Rat  1583 F--AKLEEAKHTFAIEEYSFSQATLEQVFVELTKEQEE 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 25/145 (17%)
ABC2_membrane_4 <293..448 CDD:289500 30/168 (18%)
EcfA2 499..717 CDD:224047 65/229 (28%)
P-loop_NTPase 500..721 CDD:304359 66/232 (28%)
ABC2_membrane_3 <972..1254 CDD:289468 59/296 (20%)
EcfA2 1307..1521 CDD:224047 52/226 (23%)
P-loop_NTPase 1324..1524 CDD:304359 51/202 (25%)
Abca5NP_775429.1 ABC2_membrane_3 <214..416 CDD:289468 39/221 (18%)
CcmA 476..788 CDD:224054 83/322 (26%)
ABC_subfamily_A 478..701 CDD:213230 66/232 (28%)
ABC2_membrane_3 <957..1224 CDD:289468 64/313 (20%)
CcmA 1288..1615 CDD:224054 74/338 (22%)
ABC_subfamily_A 1290..1521 CDD:213230 53/231 (23%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C166342239
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
65.750

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