DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and ABCA6

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_525023.2 Gene:ABCA6 / 23460 HGNCID:36 Length:1617 Species:Homo sapiens


Alignment Length:1836 Identity:364/1836 - (19%)
Similarity:704/1836 - (38%) Gaps:470/1836 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKGLLFKRYIRIELNLWRRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQD 68
            :|.||.|.::: :..:.|.:|.|....:::.|.|         .|..::..|.....:....|..
Human    12 TKALLCKNFLK-KWRMKRESLLEWGLSILLGLCI---------ALFSSSMRNVQFPGMAPQNLGR 66

  Fly    69 INILTRMADSKREKTKYILAFTPETTFTSEVTKN--VAKTLELSSTVGYESESEMQNQFDERTTL 131
            ::        |...:..::.:||.:..|.::...  :|..|:.:|.:|..:::.|.....|....
Human    67 VD--------KFNSSSLMVVYTPISNLTQQIMNKTALAPLLKGTSVIGAPNKTHMDEILLENLPY 123

  Fly   132 A-GIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTED---RLW---------ITRCSGRINPGR 183
            | ||:||:        |.|..:.|...:.  :|...||   ..|         :|:         
Human   124 AMGIIFNE--------TFSYKLIFFQGYN--SPLWKEDFSAHCWDGYGEFSCTLTK--------- 169

  Fly   184 DRAKHDKQQDIYIREGFLQLQHQI---FVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVM 245
                       |...||:.||..|   .:|        |.:.:|            ..:|..||.
Human   170 -----------YWNRGFVALQTAINTAIIE--------ITTNHP------------VMEELMSVT 203

  Fly   246 SVAQ--LP----TFLYNFIYLLPFL----------------------NIIRNVAAQVEDGVMVHQ 282
            ::..  ||    ..|:|.:::|.||                      |:::.:..|         
Human   204 AITMKTLPFITKNLLHNEMFILFFLLHFSPLVYFISLNVTKERKKSKNLMKMMGLQ--------- 259

  Fly   283 WHYGYSFGMQWGIKFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEI 347
               ..:|.:.||:.:         .|.|:.|.:                    ||..|..:|..|
Human   260 ---DSAFWLSWGLIY---------AGFIFIISI--------------------FVTIIITFTQII 292

  Fly   348 IITG-MVVAKLFANPTNAVLFALMLWLFMYAAFCIILERYWDIHKYYVFFILVAFCNC------- 404
            ::|| ||:..||      .|:.|.|...:: ...::|::  .:....|.|:|..|..|       
Human   293 VMTGFMVIFILF------FLYGLSLVALVF-LMSVLLKK--AVLTNLVVFLLTLFWGCLGFTVFY 348

  Fly   405 -QMHFSMSLFRN-C------------IEKPEMVNTIDF----------VLIFTSAISSALIYFLI 445
             |:..|:....| |            |:....:|.:.|          :..|:..:...|||.|:
Human   349 EQLPSSLEWILNICSPFAFTTGMIQIIKLDYNLNGVIFPDPSGDSYTMIATFSMLLLDGLIYLLL 413

  Fly   446 LLAIQWRMP----------------GTFLSRR----IVNNRPRKQQESDTTIMYLGRAPSFQNFE 490
            .|.....:|                ..|..:|    ::......:..||.  .:...||.||   
Human   414 ALYFDKILPYGDERHYSPLFFLNSSSCFQHQRTNAKVIEKEIDAEHPSDD--YFEPVAPEFQ--- 473

  Fly   491 FGDVGSVELMRLRHVSTSHRDSERKI--LKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFP 553
                 ..|.:|:|:|...::....|:  ||.:...||.|::..||||.|:||.:||.||.||..|
Human   474 -----GKEAIRIRNVKKEYKGKSGKVEALKGLLFDIYEGQITAILGHSGAGKSSLLNILNGLSVP 533

  Fly   554 LRGNVYIMG---NPFEPNGEARRLV------DFRFDEHGLNKHLTVEQTIDYHVRLKLSPSESDR 609
            ..|:|.|..   :..:...|.|::.      :.:||      .|||::.:....::|....:...
Human   534 TEGSVTIYNKNLSEMQDLEEIRKITGVCPQFNVQFD------ILTVKENLSLFAKIKGIHLKEVE 592

  Fly   610 YEIERRKWLAILDQHVESRGVRIGK-LSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIF 673
            .|::|    .:|:..:::....:.| ||.|..:.:.....:.||..|::|:||||.|........
Human   593 QEVQR----ILLELDMQNIQDNLAKHLSEGQKRKLTFGITILGDPQILLLDEPTTGLDPFSRDQV 653

  Fly   674 WSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKKPHV 738
            ||::...:.:...:.:|.::.||:.:|||..|:|.|.|:.:|:..||:.::.....|.:.:....
Human   654 WSLLRERRADHVILFSTQSMDEADILADRKVIMSNGRLKCAGSSMFLKRRWGLGYHLSLHRNEIC 718

  Fly   739 PDQPITDYINQFMQNIEPENEIGDSLTYRLPVIYRPRLQKLLIHLE--IDRKMLGIENVRVVGAE 801
            ..:.||.:|...:.:.:.:.|..:.|.|.||:........|...|:  .|:   |:....:..:.
Human   719 NPEQITSFITHHIPDAKLKTENKEKLVYTLPLERTNTFPDLFSDLDKCSDQ---GVTGYDISMST 780

  Fly   802 LSDIYMTLVTSFRLQQ-----QMIPDVTQTFKYQV-----------VSQKQLTKQRMRAM----F 846
            |::::|.|.....::|     :||.|.....:.::           ||...|.:.::.||    |
Human   781 LNEVFMKLEGQSTIEQDFEQVEMIRDSESLNEMELAHSSFSEMQTAVSDMGLWRMQVFAMARLRF 845

  Fly   847 YK-----KMIHTAPNVWPIIMIFTSFVLIAIIARLSVLLDMPKERQNSIHIGF-------REPED 899
            .|     |::.|...|:. |.||...|...:.|.|:..:|.  |.:|.::  |       :||..
Human   846 LKLKRQTKVLLTLLLVFG-IAIFPLIVENIMYAMLNEKIDW--EFKNELY--FLSPGQLPQEPRT 905

  Fly   900 VVKYLPNLKDCGYIDIRSAVKVNKKKSVGVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESD 964
            .:..:.|.:.    :|...:|..|.:::    ..:.|.|....|:        :.|...||:...
Human   906 SLLIINNTES----NIEDFIKSLKHQNI----LLEVDDFENRNGT--------DGLSYNGAIIVS 954

  Fly   965 G---DEHLNGYISQDMFHSAPMMLNLLQNVILRLSYPMQTDLVVLVENHPLPTQLSQKINVLDNK 1026
            |   |...:...:....|..|:::|::.|.:|::....|.   :.:|:.|.|..           
Human   955 GKQKDYRFSVVCNTKRLHCFPILMNIISNGLLQMFNHTQH---IRIESSPFPLS----------- 1005

  Fly  1027 IAHIHVPLVVGC--------IIPLTVSVFV-IPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDW 1082
                |:.|..|.        ::..::|.:: :..:.:...:.:....::||....:|......| 
Human  1006 ----HIGLWTGLPDGSFFLFLVLCSISPYITMGSISDYKKNAKSQLWISGLYTSAYWCGQALVD- 1065

  Fly  1083 FTFFVYSVIIVVIMSLMGIGGFGFYENAIMVVLLTT---FGLAALPLTYLVSMFVNKSIVRAFLV 1144
            .:||   ::|:::|.|:      ||...:..:|:|:   |.|..:...|..|:     :...:::
Human  1066 VSFF---ILILLLMYLI------FYIENMQYLLITSQIVFALVIVTPGYAASL-----VFFIYMI 1116

  Fly  1145 SVLL---QGVSGLVLYIIYWDVANSNTIFFYAACMSPGFSLLDGVSNVYAQNLEQAICIDKCEAT 1206
            |.:.   :..|||      |     :..||:|:.:....:|::        :.:.:|.|......
Human  1117 SFIFRKRRKNSGL------W-----SFYFFFASTIMFSITLIN--------HFDLSILITTMVLV 1162

  Fly  1207 DSCT------------EENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSALIFLMLIFWIELH- 1258
            .|.|            :|:..| .|...|:..   |...::..|.|  ...|:|:.::..:||. 
Human  1163 PSYTLLGFKTFLEVRDQEHYRE-FPEANFELS---ATDFLVCFIPY--FQTLLFVFVLRCMELKC 1221

  Fly  1259 -----RREKKFHTSRDLRKMR-TATYPFD-DGDVADVKQKIAEADNTKAKQSVFLVDQVEARVPA 1316
                 |::..|..|...|..: ....|.| |.|:...:.:.|.|..|.      ::|:....:.:
Human  1222 GKKRMRKDPVFRISPQSRDAKPNPEEPIDEDEDIQTERIRTATALTTS------ILDEKPVIIAS 1280

  Fly  1317 ------AGKR------------IHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIY 1363
                  ||::            ...:||.:.:...:|:.||..:|||..:|.:.|......||:.
Human  1281 CLHKEYAGQKKSCFSKRKKKIAARNISFCVQEGEILGLLGPNGAGKSSSIRMISGITKPTAGEVE 1345

  Fly  1364 VRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKI---------GEKMHD 1419
            ::|      ..|:..::||.||...|...||.|||:.:...::|:.:|..         ..|:|:
Human  1346 LKG------CSSVLGHLGYCPQENVLWPMLTLREHLEVYAAVKGLRKADARLAIARLVSAFKLHE 1404

  Fly  1420 LCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILR-YIR 1483
               .||:      ....|||....||...|:|:..:.:|:||||:.|:..|.::::|..:: .::
Human  1405 ---QLNV------PVQKLTAGITRKLCFVLSLLGNSPVLLLDEPSTGIDPTGQQQMWQAIQAVVK 1460

  Fly  1484 YCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDG-ATLAES 1547
            ...:.::..|::..|.:.|.|.:.:.....:..|||:|:|:.|....:.||:::.... .||..:
Human  1461 NTERGVLLTTHNLAEAEALCDRVAIMVSGRLRCIGSIQHLKNKLGKDYILELKVKETSQVTLVHT 1525

  Fly  1548 EENLRKDVENLAKFVNFLHNRSELVG--RLNNWFKFYVPVGHIV-YSFLYGAMEKNKLRLNVSDY 1609
            |               .|....:..|  |.::...:.:||..:. .|..:..:|..|...|:.:|
Human  1526 E---------------ILKLFPQAAGQERYSSLLTYKLPVADVYPLSQTFHKLEAVKHNFNLEEY 1575

  Fly  1610 CIYQADMMSVVAQVQE 1625
            .:.|..:..|..::.:
Human  1576 SLSQCTLEKVFLELSK 1591

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 29/161 (18%)
ABC2_membrane_4 <293..448 CDD:289500 37/186 (20%)
EcfA2 499..717 CDD:224047 63/229 (28%)
P-loop_NTPase 500..721 CDD:304359 64/232 (28%)
ABC2_membrane_3 <972..1254 CDD:289468 52/308 (17%)
EcfA2 1307..1521 CDD:224047 55/241 (23%)
P-loop_NTPase 1324..1524 CDD:304359 53/209 (25%)
ABCA6NP_525023.2 ABC2_membrane_3 34..375 CDD:289468 79/457 (17%)
CcmA 476..788 CDD:224054 81/324 (25%)
ABC_subfamily_A 478..701 CDD:213230 64/232 (28%)
ABC2_membrane_3 866..1167 CDD:289468 65/372 (17%)
CcmA 1275..1592 CDD:224054 74/347 (21%)
ABC_subfamily_A 1296..1501 CDD:213230 53/219 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C165148345
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
User_Submission 00.000 Not matched by this tool.
54.750

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