DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and Abca5

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_671752.2 Gene:Abca5 / 217265 MGIID:2386607 Length:1642 Species:Mus musculus


Alignment Length:1802 Identity:369/1802 - (20%)
Similarity:703/1802 - (39%) Gaps:373/1802 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKGLLFKRYI---RIELNLWRRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHK 65
            ::.||.|.|:   |.:.:..:..||.:..|..::||..::|                     :.|
Mouse    14 TRTLLLKNYLIKCRTKKSSVQEILFPLFFLFWLILVSMMHP---------------------NKK 57

  Fly    66 LQDINILTRMADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSS---TVGYESESEM-QNQFD 126
            .::::.:......|...:..||.:||.|..||.:.:.|: |..|..   |..|.:|.|: .....
Mouse    58 YEEVSDIELSPMDKFSLSNVILGYTPVTNITSSIMQRVS-TDHLPKVIVTEEYANEKELVAASLS 121

  Fly   127 ERTTLAGIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDRAKHDKQ 191
            :.:...|:||.|        |:|..:||..|...::......|   ..||...:..:        
Mouse   122 KSSNFVGVVFKD--------TMSYELRFFPEMIPVSSIYMNSR---EGCSKTCDAAQ-------- 167

  Fly   192 QDIYIREGFLQLQHQIFVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSVAQLPTF--- 253
               |...||..||..|          |......:.||.|::.|...........:|.::.||   
Mouse   168 ---YWSLGFTVLQASI----------DAAIIQLKTNVSVWSELESTKAVIMGEAAVVEIDTFPRG 219

  Fly   254 ---LYNFIYLLPF-----LNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFL-VLFLRMCILGV 309
               :|..|...||     ::|:.....::::.:.:...| ..:|.:.|.:.:. ::||...::.|
Mouse   220 VILIYLVIAFSPFGYFLAIHIVAEKEKKLKEFLKIMGLH-DTAFWLSWVLLYASLIFLMSLLMAV 283

  Fly   310 IYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTN-AVLFALMLWL 373
            |.|...|           |..:.:|.......||.:..:...:::..||....: .|:...:..:
Mouse   284 IATASSL-----------FPQSSSIVIFLLFFLYGLSSVFFALMLTPLFKKSKHVGVVEFFVTVV 337

  Fly   374 FMYAAFCIILERYWDIHKYYVFFILVAFCNCQ--------MHF----SMSLFRNCIEKPEMVNTI 426
            |.:....|:|...:.....::|..|   |.|.        ||.    ..:||.|..|.|      
Mouse   338 FGFVGLLIVLIESFPRSLVWLFSPL---CQCAFLIGIAQVMHLEDFNEGALFSNLTEGP------ 393

  Fly   427 DFVLIFTSAISSALIYFLILLAI--QWRMPGTFLSRRIVNNRPRKQQESDTTIMYLGRAPSF--- 486
             :.||.|..:.:....|.:|||:  ...:||.|..||             :::.:|  .||:   
Mouse   394 -YPLIITIIMLALDSVFYVLLAVYLDQVIPGEFGLRR-------------SSLYFL--KPSYWSK 442

  Fly   487 --QNFEFGDVGSV--------------------ELMRLRHVSTSHRDSERKI--LKNISMRIYRG 527
              :|::....|::                    |.:|:..:..|:|.....:  |:|:|..||.|
Mouse   443 NKRNYKELSEGNINGNISLNEIVEPVSSEFIGKEAIRISGIQKSYRKKTENVEALRNLSFDIYEG 507

  Fly   528 EVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMG---NPFEPNGEARRLV------DFRFDEHG 583
            ::..:|||.|:||.||:.||.||..|..|...|.|   :..:...|||:::      |..||.  
Mouse   508 QITALLGHSGTGKSTLMNILCGLCPPSDGFASIYGHRVSEIDEMFEARKMIGICPQSDINFDV-- 570

  Fly   584 LNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVES-RGVRIGKLSSGSMKLVALCC 647
                ||||:.:.....:|..|:.:...|:::    .:||..::: :..:..|||.|..:.:::..
Mouse   571 ----LTVEENLSILASIKGIPANNIIQEVQK----VLLDLDMQAIKDNQAKKLSGGQKRKLSVGI 627

  Fly   648 CLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLE 712
            .:.|:..|::|:|||..:......|.|:::...|.||..:.:|:.:.||:.:|||..::|.|:|:
Mouse   628 AVLGNPKILLLDEPTAGMDPCSRHIVWNLLKYRKANRVTVFSTHFMDEADILADRKAVISQGMLK 692

  Fly   713 ASGTPFFLRSKFSSSVDLVIIKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRLPVIYRPRLQ 777
            ..|:..||:||:.....|.:....:...:.::..:.|.:.......:....|.|.||.....:..
Mouse   693 CVGSSIFLKSKWGIGYRLSMYIDRYCATESLSSLVRQHIPAAALLQQNDQQLVYSLPFKDMDKFS 757

  Fly   778 KLLIHLEIDRKMLGIENVRVVGAELSDIYMTLVT------------------------SFRLQQQ 818
            .|...|:| ...||:.:..|....|.|:::.|..                        ||...:|
Mouse   758 GLFSALDI-HSNLGVISYGVSMTTLEDVFLKLEVEAEIDQADYSVFTQQPREEETDSKSFDEMEQ 821

  Fly   819 MIPDVTQTFKYQVVSQKQLTKQRMRAM---FYKKMIHTAPNVWPIIMIFTSFVLIAIIARLSVLL 880
            .:..:::| |...||...|.||::..:   .:..:...:.:|..::::...|..:.|....    
Mouse   822 SLLILSET-KASSVSTMSLWKQQVSTIAKFHFLSLKRESKSVRAVLLLLLIFFAVQIFMFF---- 881

  Fly   881 DMPKERQNSIHIGFREPEDVVKYLPNL-------KDCGY-----------IDIRSAVKVNKKKSV 927
                     :|..|:.....:|.:|:|       |...|           .||...::....:::
Mouse   882 ---------LHHSFKNAVVPIKLVPDLYFLKPGDKPHKYKTSLLLQNSTDSDINGLIEFFAHQNI 937

  Fly   928 GVSRTFDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYISQDMFHSAPMMLNLLQNVI 992
            .|: .|:|..:|          .......:...|.|:.|...:...:..|.:..|:|:|::.|..
Mouse   938 MVA-MFNDSDYV----------SAAPHSAALNVVRSEKDYVFSAVFNSTMVYCLPVMMNIISNYY 991

  Fly   993 ---LRLSYPMQTDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEE 1054
               |.::..:||          ..|...|:|..:..||.......::|.|:......|.:...|.
Mouse   992 LYHLNVTEAIQT----------WSTPFIQEITDIVFKIELYFQAALLGIIVTAMPPYFAMENAEN 1046

  Fly  1055 EIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGI-GGFGFYENAIMVVL--L 1116
            ..........::||....:|......|...|||  |:|:::.||... .|..||....:.|:  |
Mouse  1047 HKIKAYTQLKLSGLLPSAYWVGQAVVDIPLFFV--VLILMLGSLFAFHHGLYFYPAKFLAVVFCL 1109

  Fly  1117 TTFGLAALPLTYLVSMFVNKSIVR-----AFLVSV---LLQGVSGLVLYIIYWDVANSNTIFFYA 1173
            ..:..:.:..||:.| |..|.|:.     :|:.||   ....::....::.|...|    :|.|.
Mouse  1110 IAYVPSVILFTYIAS-FTFKKILNTKEFWSFIYSVTALACVAITETTFFLQYAVTA----VFHYT 1169

  Fly  1174 ACMS-PGFSLLDGVSNVYAQNLEQAICIDKCEATDSC-------TEENM--NEVVPNCKFDTFFK 1228
            .|:: |.:.||                        .|       :.:||  ||       :|:..
Mouse  1170 FCIAIPIYPLL------------------------GCLISFIKGSWKNMPKNE-------NTYNP 1203

  Fly  1229 WAAPGILPPILYMVLSALI--FLMLIFWIELHRREKKFHTSRDLRK--------MRTATYPFDDG 1283
            |.          .:|.|:|  :|..|.||.|.:..:|.|..|.:||        .:.....|.:.
Mouse  1204 WD----------RLLVAVIMPYLQCILWIFLLQHYEKIHGGRSIRKDPFFRALSQKAKNKKFPEP 1258

  Fly  1284 DVADVKQKIAEADNTKAKQ----------SVFLVDQVEARVPAAGKRIHT----------VSFAL 1328
            .:.:.:.:..:|:..|.|:          ...:|..:..........:|:          :||.:
Mouse  1259 PINEDEDEDVKAERLKVKELMGCQCCEEKPAIMVCNLHKEYDDKKDFLHSRKTTKVATKYISFCV 1323

  Fly  1329 NKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYV--RGLDFKYDLESIHTYMGYSPQHRGLLN 1391
            .|...:|:.||..:|||.::..|||......|:|::  .|.....|.|||.. |||.||...|..
Mouse  1324 KKGEILGLLGPNGAGKSTVINTLVGDVEPTSGKIFLGDYGSHSSEDDESIKC-MGYCPQTNPLWP 1387

  Fly  1392 ELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNK 1456
            :||.:||..:...::|:....:.|.:..:...|::...:.:....|.|..:.||..||:::...:
Mouse  1388 DLTLQEHFEIYGAVKGMSPGDMKEVISRITKALDLKEHLQKTVKKLPAGIKRKLCFALSMLGNPQ 1452

  Fly  1457 ILVLDEPTCGMPATTRREIWNILR-YIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSL 1520
            :.:||||:.||....::.:|..:| ..:...:..:..|:...|.:.:.|.:.:....::..||::
Mouse  1453 VTLLDEPSTGMDPRAKQHMWRAIRTAFKNKKRAALLTTHYMEEAEAVCDRVAIMVSGQLRCIGTV 1517

  Fly  1521 QYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVP- 1584
            |:|:.|:..|::||::| :|..      |||  :::.|.:.:.::...:......::...|.:| 
Mouse  1518 QHLKSKFGKGYFLEIKL-KDWI------ENL--EIDRLQREIQYIFPNASRQESFSSILAFKIPK 1573

  Fly  1585 --VGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQ 1629
              |..:..||  ..:|:.|....:.:|...||.:..|..::.:.:.:
Mouse  1574 EDVQSLSQSF--AKLEEAKRTFAIEEYSFSQATLEQVFVELTKEQEE 1618

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 25/145 (17%)
ABC2_membrane_4 <293..448 CDD:289500 33/168 (20%)
EcfA2 499..717 CDD:224047 65/229 (28%)
P-loop_NTPase 500..721 CDD:304359 66/232 (28%)
ABC2_membrane_3 <972..1254 CDD:289468 62/307 (20%)
EcfA2 1307..1521 CDD:224047 53/226 (23%)
P-loop_NTPase 1324..1524 CDD:304359 52/202 (26%)
Abca5NP_671752.2 rim_protein <84..1618 CDD:130324 352/1709 (21%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838449
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 1 0.950 - 0 Normalized mean entropy S6314
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
76.700

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