DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and Abca9

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_671753.2 Gene:Abca9 / 217262 MGIID:2386796 Length:1623 Species:Mus musculus


Alignment Length:1862 Identity:341/1862 - (18%)
Similarity:685/1862 - (36%) Gaps:476/1862 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly    10 KRYIRIELNLW--------------RRTLFE-IVALVIMVLVIFLNPIAHSKRLLYTTTENENEQ 59
            ||::|:...:|              |.||.| :.:|::::.|..|:...|.       ..:..|.
Mouse     3 KRHLRLGQQMWALLCKNWLRKFRMRRETLLEWLFSLLLILFVYQLSSNLHQ-------VHDAPEM 60

  Fly    60 SIVSHKLQDINILTRMADSKREKTKYILAFTPETTFTSEVTKNVAKT--LELSSTVGYESESEMQ 122
            |:|     |:..:....||     .|::.|.||:..|.|:...||..  ::..:.|....|..| 
Mouse    61 SVV-----DLGRVDNFNDS-----NYMMVFAPESEATHEIMNKVASAPFMKGRTIVACPDEKSM- 114

  Fly   123 NQFDERTTL--AGIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDR 185
            |:.|...::  ..::|.|        |.|..::|.               |    ..||...::.
Mouse   115 NELDLNYSIDAVRVIFKD--------TFSYHLKFS---------------W----GQRIPKTKEH 152

  Fly   186 AKHDK-----------QQDIYIREGFLQLQHQI---FVEWY--HQLRKDIVSTYPEPNVEVYNIL 234
            ..|..           :...:..:||:..|..|   .:|..  |.:.::::|.            
Mouse   153 KDHSAPCEPLNNKMICENSAFWEKGFVAFQAAINAGIIEMITNHSVMEELMSV------------ 205

  Fly   235 LKAADEPCSVMSVAQLPTFL---------YNFIYLLPFLNIIRNVAAQVED------GVMVHQWH 284
                     :.|..::|.|:         :.|..::.|.::|..::..:..      .:|.....
Mouse   206 ---------IGSNMKMPPFIAQGGVATDFFIFFCVISFSSLIYYLSVNITQERQYMTTLMAMMGL 261

  Fly   285 YGYSFGMQWGIKFLVLFLRMCILG--VIYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEI 347
            ...:|.:.|.:.:....|.:.:|.  ::.:..::...||           .:.|:.|: .|.:.:
Mouse   262 RESAFWLSWSLMYAGFILVVAVLMSLIVKSAQVVVLTGF-----------MVVFLLFL-FYGLSL 314

  Fly   348 IITGMVVAKLFANPTNAVLFALMLWLFMYAAFCIILERYWD------IHKYYVFFILVAFCNCQ- 405
            |....:::.|...|            |:......||..:|.      ::|:...|:....|... 
Mouse   315 ITLSFLMSVLIKKP------------FLTGLAIFILTVFWGSLGFTALYKHLPAFVEWTLCFLSP 367

  Fly   406 ----------MHFSMSLFRNC-IEKPE---MVNTIDFVLIFTSAISSALIYFLILLAI------- 449
                      :|....:..|. :..|.   ::....|:|:.     .||:|.::.|..       
Mouse   368 FAFTTGMAQLIHLDYDVNSNVNLNSPNNSYLIMATLFMLVL-----DALLYLVLALYFDKITLSK 427

  Fly   450 --QWRMPGTFL-----------SRRIVNNRPRKQQESDTTI--MYLGRAPSFQNFEFGDVGSVEL 499
              ..|.|..||           |..::.|    :.:||.::  .....:|.||        ..|.
Mouse   428 YGHQRSPLFFLKSSYWFKRRGASHVVLEN----EIDSDPSLNDSLEPVSPEFQ--------GKEA 480

  Fly   500 MRLRHVSTSHRDSERKI--LKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMG 562
            :|::::...:.....|:  |:.:...||.|::..:|||.|:||.||:..|:||..|..|:|.|..
Mouse   481 IRIKNLKKEYSGKHGKVEALRGLGFDIYEGQITALLGHSGAGKTTLINTLSGLSPPTTGSVTIYN 545

  Fly   563 NPFEPNGEARRL-----------VDFRFDEHGLNKHLTVEQTIDYHVRLK-LSPSESDRYEIERR 615
            .......::..:           |.|.|        |||.:.:....::| :.|     :|:|:.
Mouse   546 QTVSEMDDSDAVLTITGVCPQSNVQFGF--------LTVRENLRLFAKIKGILP-----HEVEQE 597

  Fly   616 KWLAILDQHVES-RGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHA 679
            ....:.|..:|: :.:....||.|..:.:.|...:.||..:::|:|||..|........|:::..
Mouse   598 VQQVLQDLEMENIQDILAQNLSGGQKRKLTLGIAILGDPQVLLLDEPTAGLDPLSRHRIWNLLKE 662

  Fly   680 EKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVI------------ 732
            .:..|..:.:|..:.||:.:|||...:|.|.|:.:|:..||:.|:.....|.:            
Mouse   663 RRAGRVIVFSTQFMDEADILADRKVFISNGRLKCAGSSLFLKKKWGIGYHLSLHLNEACDPEGIT 727

  Fly   733 -IKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRLPVIYRPRLQKLLIHLEIDR-KMLGIENV 795
             :.|.|:.|..:|....:.:..|.|...     |.:.|.:||          ::|| ...|||:.
Mouse   728 SLVKKHISDARLTTQSEERLVYILPLER-----TNKFPDLYR----------DLDRCSNQGIEDY 777

  Fly   796 RVVGAELSDIYMTLVTSF-----------RLQQQMIPDVTQTFKYQ----------VVSQKQLTK 839
            .|....|:::::.|....           |||.....|:....:.:          .||...|.:
Mouse   778 GVSMTTLNEVFLKLEGKSMADESDVGICGRLQSDGARDMESLVELEQVLSLDSSGSSVSGMALWR 842

  Fly   840 QRMRAM----FYKKMIHTAPNVWPIIMIF-TSFVLIAIIARLSVLLD--MPKERQNSIHIGF--- 894
            |::.|:    |: |:.:...::..::::| .|||        ..||:  :.|....|...|.   
Mouse   843 QQLCAVAKVRFF-KLKNERKSLMTVLLLFGISFV--------PQLLEHLVYKVYHKSYSWGLSPS 898

  Fly   895 -------REPEDVVKYLPNLKDCGYIDIRSAVK--VNKKKSVGVSRTFDDDSFVCEKGSYRNNLR 950
                   :.|:|.:.:|..:...|     |::.  |:..:..|::  .|.|:.....|:      
Mouse   899 MYFLSPGQPPQDPLTHLLVINRTG-----SSIDNFVHALRQQGIA--LDLDALGTRNGT------ 950

  Fly   951 KKNELRSFGAVESDGDE------------HLNGYISQDMFHSAPMMLNLLQNVILRL---SYPMQ 1000
              .|....||:...|:|            .||.:         |::::::.|.:|.:   |..:|
Mouse   951 --EEALYNGAITVLGEEKALRFSVACNAKRLNCF---------PVLMDIISNGLLGIFNSSERIQ 1004

  Fly  1001 TDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFVIPLVEEEIYDVRFLQHM 1065
            ||...:.|.|.|     .:...:.|  |...:| |...:.|      .|.:.....:..:.|..:
Mouse  1005 TDRSTVFEEHML-----YEYGFMSN--AFFWIP-VAASLTP------YIAMGSISDHKKKVLSQL 1055

  Fly  1066 --AGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYENAIMVVLLTTFGLAA--LPL 1126
              :||....:|......|...:|:...::.::.|:.....|.....::::.:..:.|.|:  :.:
Mouse  1056 WTSGLYPSAYWCGQALVDIPIYFLILFLMQIMDSVFSSEEFISVMESLLIQIPCSIGYASSLIFM 1120

  Fly  1127 TYLVSMFV-----NKSIVRAFLVSVLLQGVSGLVLYIIYWDVANSNTIFFYAAC--MSPGFSLLD 1184
            ||::|...     |..|...|.:.|       .:.:||..|: |.........|  :.|.|:|: 
Mouse  1121 TYVISFIFRNGRKNSGIWSFFFLIV-------TIFFIIATDI-NEYGFLELLICTFLVPPFTLI- 1176

  Fly  1185 GVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSALIFL 1249
            |...::::     :..|..:...  |.|:....:              .:|.|.|:.    |:|.
Mouse  1177 GSLLIFSE-----VSYDSVDYLG--TSESQLVFL--------------ALLIPYLHF----LLFF 1216

  Fly  1250 MLIFWIELHRREKK------FHTSRDLRKMRTATYPFDDGDV-ADVKQKIAEADNTKAKQSVFLV 1307
            .::..:|.:.|:|.      |..|.  |.......|.:.|:. .||:.   |...|....:....
Mouse  1217 FILRCLERYLRKKSLRVDPVFRISP--RSCPAVPNPEEPGEEDEDVQM---ERVRTTGAMATLQT 1276

  Fly  1308 DQVEARVPAA----------------GKRIHT--VSFALNKYMSMGIFGPRNSGKSHLMRQLVGQ 1354
            |:....:.:.                .|:|.|  :||.:.|...:|:.|...:|||..:..:.|.
Mouse  1277 DEKPVIIASCLRKEYIGRTKRCFSKMKKKIATRNISFCVKKGEVLGLLGHNGAGKSTTISMITGD 1341

  Fly  1355 RGFAFGEIYVRG------LDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKI 1413
            .....|:::::|      |.|          :||.||...|...||.:||:.|...::|:.:...
Mouse  1342 TIPTAGQVFLKGSGGGAALGF----------LGYCPQENVLWPNLTVKEHLELYAAVKGLKKKDA 1396

  Fly  1414 GEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNI 1478
            ...:..|...|.:...:......|:...:.||...|:::....:::||||:.||....::::|..
Mouse  1397 VVTITRLVNALKLQDHLKALVRTLSEGVKRKLCFVLSILGNPPVVLLDEPSTGMDPEGQQQMWQA 1461

  Fly  1479 LR-YIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGA 1542
            :| ......:..:..|:...|.:.:.|.:.:.....:..|||:|:|:.|:...:.||:::     
Mouse  1462 IRATFTNTERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKDYLLEMKV----- 1521

  Fly  1543 TLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHI-VYSFLYGAMEKNKLRLNV 1606
                   .....||.|...:..|..::....|.::...:.:||..: ..|..:..:|:.|...::
Mouse  1522 -------KTPSQVEPLNTEIMRLFPQAARQERYSSLMVYKLPVEDVRPLSEAFFKLERLKENFDL 1579

  Fly  1607 SDYCIYQADMMSVVAQV----------QETRAQLKHHLVQTE 1638
            .:|.:.|:.:..|..::          :|..:.:|..|:..|
Mouse  1580 EEYSLSQSTLEQVFLELSKEQELDDFGEEANSSVKWKLLPQE 1621

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 20/149 (13%)
ABC2_membrane_4 <293..448 CDD:289500 26/177 (15%)
EcfA2 499..717 CDD:224047 56/232 (24%)
P-loop_NTPase 500..721 CDD:304359 57/235 (24%)
ABC2_membrane_3 <972..1254 CDD:289468 50/295 (17%)
EcfA2 1307..1521 CDD:224047 48/238 (20%)
P-loop_NTPase 1324..1524 CDD:304359 45/206 (22%)
Abca9NP_671753.2 rim_protein <128..1600 CDD:130324 306/1696 (18%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838469
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
54.750

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