DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and Abca8a

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_006533124.3 Gene:Abca8a / 217258 MGIID:2386846 Length:1653 Species:Mus musculus


Alignment Length:1834 Identity:371/1834 - (20%)
Similarity:691/1834 - (37%) Gaps:469/1834 - (25%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLFKRYIRIELNLWRRTLFEIV--ALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQDI 69
            ||.|..:| :..|.|.|..|.:  ||:::.|::||.                      .|::.|.
Mouse    49 LLCKNLLR-KKRLKRDTFLEFLYTALILLSLILFLQ----------------------LHEVYDF 90

  Fly    70 NILTRM----ADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSSTVGY---------ESESEM 121
            :.|..:    .||..:.| :::.:||.|..|..:...|       |.|.|         .:|..|
Mouse    91 SSLPDVDLGRIDSFNDST-FMIVYTPITPTTQRIMDRV-------SLVSYMTGRKILASPNEENM 147

  Fly   122 QNQFDER-TTLAGIVFNDLRDDGTPLTLSISIRFPSEFRTIAPFLTEDRLWITRCSGRINPGRDR 185
            ......| :.:.|::|.:        ..|.:::|....|  .|.:.|.:.....|          
Mouse   148 TELISMRFSDVVGVIFTN--------AYSYNLKFIKGAR--IPTIKEHQDHTAHC---------- 192

  Fly   186 AKHDKQQDIYI------REGFLQLQHQI---FVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEP 241
              |...:.||.      |:||:.||..|   .:|         |:|    |..|...::....:.
Mouse   193 --HSYGEIIYCGLSEFWRDGFVALQAAINAAIIE---------VTT----NHSVMEEMMSLTGKY 242

  Fly   242 CSVMS-VAQ--LPTFLYNFIYLLPFLNIIRNVAAQVE------DGVMVHQWHYGYSFGMQWG--- 294
            ..:.| |.|  ..|..:.|..::.|..:...::|.|.      .|:|........:|.:.||   
Mouse   243 IKIDSFVGQEGTTTDCFLFFCIIRFSPLTYYISAGVTRERKKMKGLMAVMGLRDSAFWLSWGLLY 307

  Fly   295 --IKFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKL 357
              |.|:|..|...|:.::..:.|               ||.:........|.:.:|....:::.|
Mouse   308 GVIVFVVTLLSTTIVKLVQFVFL---------------TGFMVIFSLFFFYGLSLISLSFLMSVL 357

  Fly   358 FANPTNAVLFALMLWLFMYAAFC-----IILERYWDIHKYYVFFILVAFCNCQMHFSMSLFR--- 414
            ....     |...|.:|:....|     ..|.||..:...::..:|..|.     |.:.:.:   
Mouse   358 LKKS-----FLTDLVVFLLTVSCGSLGFTALYRYLPVSLEWLLSLLSPFA-----FMLGMVQLLR 412

  Fly   415 -----NCIEKP-----EMVNTIDFVLIFTSAISSAL-IYFLILLAIQW--RMP------GTFLSR 460
                 |....|     |::.|| |:|.|.......| .||..:|..::  |.|      .:|.|.
Mouse   413 LDYDVNSNADPMGNPNEVIGTI-FMLFFDGVFYLLLTFYFEKVLPSEYGRRHPPLFFLKSSFWSG 476

  Fly   461 RIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGD---------VGSVELMRLRHVSTSH--RDSER 514
            :...||.....|:|              :||.|         ....|.:|:|:::..:  :....
Mouse   477 QNPANRTALDNETD--------------YEFSDDSFEPVSMEFHGKEAIRIRNLTKDYIQKSKRT 527

  Fly   515 KILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEPNGEARRL----- 574
            :.||::::.:|:|::..||||.|:||.|||.:|:||..|.:|.|.|..|......:...:     
Mouse   528 EALKDLTLDVYKGQITAILGHSGAGKSTLLNVLSGLCVPTKGWVTIHNNKLSEMTDLENISKLTG 592

  Fly   575 ------VDFRFDEHGLNKHLTVEQTIDYHVRLK-LSPSESDRYEIERRKWLAILDQHVESRGVRI 632
                  |.|.|        |||.:.:....::| :...|.|. |::|  .|..||.. .::.:.:
Mouse   593 VCPQCNVQFDF--------LTVRENLRLFAKIKGIQAHEVDN-EVQR--VLLELDMK-NTQNILV 645

  Fly   633 GKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAE 697
            ..||.|..:.:.....:.||..|.:|:|||..|........|:.:...:.:|..:.:|..:.||:
Mouse   646 QNLSGGQKRKLTFGIAILGDPQIFLLDEPTAGLDPFSRHRVWNFLKERRADRVVLFSTQFMDEAD 710

  Fly   698 HVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVI-------------IKKPHVPDQPITDYINQ 749
            .:|||...:|.|.|:.:|:..||:.|:.....|.:             :.|.|:||..:      
Mouse   711 ILADRKVFISKGKLKCAGSSLFLKKKWGIGYHLSLQLSETCVHERITSLVKQHIPDSKL------ 769

  Fly   750 FMQNIEPENEIGDSL----TYRLPVIYRPRLQKLLIHLEIDRKM-LGIENVRVVGAELSDIYMTL 809
               :.|.|.::...|    |.:.|.:||          :::|.. |||||..|....|:::::.|
Mouse   770 ---SAESEGKLSYILPLERTNKFPDLYR----------DLERSPDLGIENYGVSITTLTEVFLKL 821

  Fly   810 VTSFRLQQQ---MIPDV-------TQTFK--YQVVS----------------QKQLTKQRMRAMF 846
            .....:.|.   |..||       .:.|.  .|:||                |:.....|:|   
Mouse   822 EGKSSIDQSDIGMTEDVQAGGARSPERFAEVEQLVSLLNGRCKMKGGMALWWQQLCAVTRLR--- 883

  Fly   847 YKKMIHTAPNVWPIIMIFTSFVLIAIIARLSVLLDMPKERQNSI------HIGFREP-EDVVKYL 904
            :.|:.|...::..:|::....:|..:.|.:..::     ||:..      |:.|..| :.....|
Mouse   884 FLKLKHERKSIVILILVLGIGLLHILSANIYRMV-----RQSDYCWELAPHMYFLTPGQQPQPPL 943

  Fly   905 PNLKDCGYIDIRSAVKVNKKKSVGVSRTFDDDSFVCEKGSYRNNLRKKN---ELRSFGAVESDGD 966
            .||           :.|||     .....||         :.::|.::|   |:.:||......|
Mouse   944 TNL-----------LIVNK-----TGAKIDD---------FIHSLEQQNIALEVDAFGTRNGTED 983

  Fly   967 EHLNGYI---------------SQDMFHSAPMMLNLLQNVILRLSYP---MQTDLVVLVENHPLP 1013
            ...||.|               :....:..|::::::.|.:|.|..|   :|||.....|.:.  
Mouse   984 SQYNGAIILSGDEKNYNFTLACNTKRLNCFPVLVDIVSNGLLGLFAPSAHIQTDRSTFPEEND-- 1046

  Fly  1014 TQLSQKINVLDNKIAHIHV-PLVVGCIIPLTVSVFVIPLVEEEIYDVR--FLQHMAGLGLKVFW- 1074
               .:|.:.|    |:..: .|::.|:.|      .|.:...:.|..|  |...::||....:| 
Mouse  1047 ---HRKFDYL----AYFFLWVLLMACVPP------YISMTSIDDYKNRAQFQLWISGLSPSAYWF 1098

  Fly  1075 GINLFWDWFTFFVYSVIIVVIMSLMGIGGFGFYENA------------IMVVLLTTFGLAALPLT 1127
            |..|    |...||..:|:.|.       ..||.:|            |.::.:..:.::.:.:|
Mouse  1099 GQAL----FEVPVYCALILSIF-------IAFYASAPPESKFTVGDLFIQILYVGGYAMSVIFMT 1152

  Fly  1128 YLVSMFVNKSIVRAFLVSVLLQGVSGLVLYIIYWDVANSNTIFFYAACMSPGFSLLDGVSNVYAQ 1192
            |::|....|....:.|.|:....||...:..:..|.....::|...|.:.|  :.|.|.:.::.:
Mouse  1153 YVISFIYRKGRKNSGLWSLCFYIVSFFSMCFMLIDYFRDISLFVLIALVPP--ATLGGCTLLHFE 1215

  Fly  1193 NLEQAICIDKCEATDSCTEENMNEVV--PNCKFDTFFKWAAPGILPPILYMVLSALIFLMLI--- 1252
            |.|                  .:|::  |..::...|      .|.|:|:..    ||::::   
Mouse  1216 NRE------------------FSEIIFEPEREYSYLF------FLAPLLHFA----IFVVILRCM 1252

  Fly  1253 ---FWIELHRREKKFHTSRDLRKMRTATYPFD-DGDVADVKQK-------IAEAD---------- 1296
               |.::..|.:..|..|.  |..|....|.| ||:..||.|:       :..||          
Mouse  1253 ERKFGMKTMRTDPVFRISP--RSDRVFNNPEDPDGEDEDVSQERVWTANALTSADFQEKPAIIAS 1315

  Fly  1297 ----NTKAKQSVFLVDQVEARVPAAGKRIHT--VSFALNKYMSMGIFGPRNSGKSHLMRQLVGQR 1355
                ..|.|:..|::        .:.|:|.|  :||.:.|...:|:.|...:|||..::.:.|:.
Mouse  1316 CLRKEYKGKKKCFVL--------KSKKKIATRNISFCVRKGEVVGLLGHNGAGKSTSIKMITGET 1372

  Fly  1356 GFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDL 1420
            ..:.|::.::|    ........::||.||...|...||.|||:.:...|:|:.::.....:..|
Mouse  1373 KPSAGQVLLKG----SSTGDTPGFLGYCPQENALWLNLTVREHLEIFAAIKGMRKSDANVAIERL 1433

  Fly  1421 CLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILR-YIRY 1484
            ...|.:...:......|:...:.||...|:::....:::||||:.||....::::|..:: ....
Mouse  1434 ADALKLQDQLKSPVKTLSEGVKRKLCFVLSILGNPSVVLLDEPSTGMDPEGQQQMWQAIQATFSN 1498

  Fly  1485 CGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEE 1549
            ..:..:..|:...|.:.:.|.:.:.....:..|||:|:|:.|:...:.||:::            
Mouse  1499 TERGALLTTHYMAEAEAVCDRVAIMVSGRLRCIGSIQHLKSKFGKEYLLEMKV------------ 1551

  Fly  1550 NLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVP---VGHIVYSFLYGAMEKNKLRLNVSDYCI 1611
            .....||.|...:..|..::....|.::...:.:|   |..:..:|.  .:|..|...::.:|.:
Mouse  1552 KTPSQVEPLNTEIMRLFPQAARQERYSSLMVYKLPREDVQPLSQAFF--KLETVKQSFDLEEYSL 1614

  Fly  1612 YQADMMSVVAQVQE 1625
            .|:.:..|..::.:
Mouse  1615 SQSTLEQVFLELSK 1628

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 27/146 (18%)
ABC2_membrane_4 <293..448 CDD:289500 34/178 (19%)
EcfA2 499..717 CDD:224047 61/231 (26%)
P-loop_NTPase 500..721 CDD:304359 62/234 (26%)
ABC2_membrane_3 <972..1254 CDD:289468 58/323 (18%)
EcfA2 1307..1521 CDD:224047 45/216 (21%)
P-loop_NTPase 1324..1524 CDD:304359 43/200 (22%)
Abca8aXP_006533124.3 rim_protein <258..1630 CDD:130324 315/1559 (20%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838393
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
43.850

Return to query results.
Submit another query.