DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and haf-3

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_506927.2 Gene:haf-3 / 180056 WormBaseID:WBGene00001813 Length:666 Species:Caenorhabditis elegans


Alignment Length:744 Identity:133/744 - (17%)
Similarity:262/744 - (35%) Gaps:195/744 - (26%)


- Green bases have known domain annotations that are detailed below.


  Fly    60 SIVSHKLQDINILTRMADSK----REKTKYILAFTPETTFTSEVTKNVAKTLELSSTVGYESESE 120
            |::||       |:|:..||    ...:..:..|.|:...::...|:   || :.|...:.:.|.
 Worm     2 SLLSH-------LSRLCCSKCSSIPSSSTRLFCFAPQVGRSTGFLKS---TL-IKSKQAFRNVSV 55

  Fly   121 MQNQFDERTTLAGIVFNDLRDDGTPLTLSISIRFPSEFRTI--APFL---TEDRLWITRCSGRIN 180
            ::.: .|...|....:.||:       ..:|:..|.::|.:  ..||   :...|:..|..|::.
 Worm    56 VETK-RESYKLKNASWKDLK-------AILSLAGPYKWRIMLGISFLGISSSIFLFTPRVLGKLI 112

  Fly   181 PGRDRAKHDKQQDIYIREGFLQLQHQIFVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPCSVM 245
            ...|..|.||.                                 :||.:...:.....:.|.::.
 Worm   113 DEWDETKQDKM---------------------------------DPNDKALLLARFFKENPIALA 144

  Fly   246 SVAQLPT---------------FLYNFIYLLPFLNIIR--------NVAAQVEDGVMVHQWHYGY 287
            .|..|..               .:.|.:....|.:::|        |...::...:.......||
 Worm   145 GVFMLGAIAIAARIYCMHTAGQLVINDLRKSVFNSVLRQDMAFFDKNKVGEIVSRLSTDALIVGY 209

  Fly   288 SFGMQ-----------WGIKFLVLF--LRMC-ILGVIYTIMLLAFWGFGGREGEF--------SG 330
            |..|.           :|...|:::  |.|| ::.|:..:::..|..||..:.::        :|
 Worm   210 SVSMNLSDGARALITCFGSGGLMVYTSLAMCKVIFVVVPVIVGTFAVFGKLQRKYTLMMQEAVAG 274

  Fly   331 TGTIAFVCFITLYTVEIIITGMVVAKLFANPTNAVLFALMLWL----------FMYAAFCIILER 385
            ...:|.....::.||.:::........:::..|.:      |.          ||:.:|      
 Worm   275 ANQVATERLSSVRTVRMLVAERKELAAYSDKINEI------WQISKKEGLAKGFMFGSF------ 327

  Fly   386 YWDIHKYYVFFILVAFCNCQMHFSMSLFRNCIEKPEMVNTIDFVLIFTSAISSALIYFLILLAIQ 450
                    .|...:|..:...:.|..:.:..:...|:.:...:.::...::|:...::|.|    
 Worm   328 --------QFTGYLALSSILFYGSNLISQGLLTYGELSSFCLYAVLSAGSLSAMSGFYLEL---- 380

  Fly   451 WRMPGTFLSRRIV---NNRPRKQQESDTTIMYLGRAPSFQNFEFGDVGSV-ELMRLRHVSTSHRD 511
              |.|...|.|:.   |..||...|...                 .:|:| :.:|..||:..:.|
 Worm   381 --MKGLGASSRLFELKNREPRIPLEGGV-----------------QIGNVKDTIRFEHVAFGYAD 426

  Fly   512 SERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMG---NPFEPN----- 568
            .: .:..|||..:..|::..::|..||||.|:..:|..|..|..|.:.:.|   ...:|:     
 Worm   427 RD-PLFHNISFDVPAGKITAVVGSSGSGKSTIASLLLRLYDPTSGRILVDGTDLKDIDPSYWRRH 490

  Fly   569 ----GEARRLVDFRFDEHGLNKHLTVEQTIDYHVRLKLSPSESD----RYEIERRKWLAILDQHV 625
                |:...|......|:.:...|..|...|..:......|.:|    |:.|:       .|..|
 Worm   491 IGTVGQEPVLFSTTIKENIIYGSLEPENVTDAEIVSAADQSNADEFISRFPIK-------YDTKV 548

  Fly   626 ESRGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGRE---AQIFWSIVHAEKENRAFI 687
            ...|   ..||.|..:.:|:...|.....|:|::|.|:.|....   .:|..:.:.|..:....|
 Worm   549 GEHG---STLSGGQKQRIAIARALVNKPNILIMDEATSALDASSEYLVRIALNKLLANSKQTVMI 610

  Fly   688 IATYNVGEAEHVADRIGILSMGVLEASGT 716
            || :.:...:| ||:|.::..|.:..||:
 Worm   611 IA-HRLSTIKH-ADQIVVVDRGSVAESGS 637

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 27/187 (14%)
ABC2_membrane_4 <293..448 CDD:289500 25/175 (14%)
EcfA2 499..717 CDD:224047 55/237 (23%)
P-loop_NTPase 500..721 CDD:304359 55/236 (23%)
ABC2_membrane_3 <972..1254 CDD:289468
EcfA2 1307..1521 CDD:224047
P-loop_NTPase 1324..1524 CDD:304359
haf-3NP_506927.2 MdlB 70..657 CDD:224055 117/664 (18%)
ABC_membrane 96..366 CDD:279056 42/322 (13%)
P-loop_NTPase 415..656 CDD:304359 55/236 (23%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
10.910

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