DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and abt-4

DIOPT Version :10

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_503175.1 Gene:abt-4 / 178559 WormBaseID:WBGene00000022 Length:1802 Species:Caenorhabditis elegans


Alignment Length:1888 Identity:405/1888 - (21%)
Similarity:741/1888 - (39%) Gaps:421/1888 - (22%)


- Green bases have known domain annotations that are detailed below.


  Fly     7 LLFKRYIRIELNLWRRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQDINI 71
            ||:|.:::...:.| ..|||:|..:|::...|...|..|.:...|.||.:.....||....|:.:
 Worm    10 LLWKNWLQQLRSPW-FALFELVVPLILIGASFGLLIGFSGQFETTYTERKYAAWPVSGSAYDLIM 73

  Fly    72 LTRMADSKREK------------------------TKY----ILAFTPETTFTSEVTK------- 101
            .|...|..:..                        .||    |.|:.|.|..|.::..       
 Worm    74 PTDPDDPIKSAIVEPYFLFNSQLTCQFLNTYTIGVNKYRMDIIFAYAPMTDATKQIMDKIQNRYT 138

  Fly   102 ----------------NVAKTLELSSTV---GYESESE----MQNQFD---ERTTLAGIVFND-- 138
                            |:.....|::.:   |:.:|.|    ||.||.   :...||||||:|  
 Worm   139 ANDLLNPVAAYIKGLYNITAVPVLNTNMTYKGFTTEGEMVSWMQGQFQSECDNPLLAGIVFDDSI 203

  Fly   139 LRDDGTP--LTLSISIRFPSEFR--------TIAPFLTEDRLWITRCSGRINPGRDRAKHDKQQD 193
            .:|...|  ...:.:||..:..|        ...|:.|.....:...||.|||.    .:|....
 Worm   204 AKDLKNPDKRDFTYTIRLSNTHRRSRNAFGDNSYPWDTSVSFAVQYVSGPINPD----DNDGGSP 264

  Fly   194 IYIREGFLQLQHQI-----------------FVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEP 241
            .|.:|||:.:|..:                 .::.|.      ||.:|.|....     |..:..
 Worm   265 GYWQEGFMTVQRAVDVAITEIITGEDAQLTPLLDSYQ------VSRFPFPGYST-----KIIEIG 318

  Fly   242 CSVMSVAQLPTFLYNFIYLLPFLNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCI 306
            ...|.|..:.:|:.:.||      |:|.|..:.||.:..:....|.|..:.|...|::.:.::..
 Worm   319 AFFMPVIVIFSFMTSVIY------IVRAVVVEKEDRLKEYMRVMGLSQFINWVAHFIINYAKLTF 377

  Fly   307 LGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTNAVLFALML 371
            ..::.||::    .|...:.:.    |:.|| |:.:|..:::....:::....:.|:|.|.:::.
 Worm   378 AVIVLTILM----HFVALKSDM----TLMFV-FLMIYAFDVVYFAFMISSFMNSATSATLISVVF 433

  Fly   372 WLFMYAAFCIILERYWDIHKYYVFFILVAFCNCQMHFSMSLFR--NCIEKPEMVN---------- 424
            |:.:|         :|     |.||..:...|   .:.:. :|  |||.....:|          
 Worm   434 WMLLY---------FW-----YAFFSSIDQTN---PYPLG-YRLINCINPDIALNYGLQLLAAYE 480

  Fly   425 ---------------TIDFVLIFTSAISSALIYFLILLAIQW-------------RMPGTFL--S 459
                           :.|..|.|..|:.:.::..:|::.:.|             :.|..|:  |
 Worm   481 TQADGLKWGELFTPPSPDNNLTFGHALIALIVDGIIMIILTWYIEAVIPGGEGVPQKPWFFVLPS 545

  Fly   460 RRIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGD-----------VGSVELMRL-RHVSTSH--- 509
            ....|:..:....||          .||..::.|           :.::.::.| :...||.   
 Worm   546 YWFPNSGSKTVDSSD----------QFQQIQYADHVKLEKEPTDLIPTINVVNLTKTYGTSFFKK 600

  Fly   510 -------RDSERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFE- 566
                   :..|::.:.|:::::|.|:..|:|||.|:||.|...:|.|:..|..|:.|:  |.|: 
 Worm   601 LFDCKFGKSGEKRAVSNLNLKMYPGQCTVLLGHNGAGKSTTFSMLTGVASPSSGSAYV--NDFDI 663

  Fly   567 ----PNGEARRLVDFRFDEHGLNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVES 627
                |  :.||.:......:.|...:||.:.:::..:||....:.:    |.|:.||.|  .::.
 Worm   664 RTSLP--KIRREMGLCPQYNTLFGFMTVMEHLEFFAKLKERTWDPE----EAREILARL--RIDF 720

  Fly   628 RG-VRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATY 691
            :. ...|.||.|..:.::|...|.|.:.:::|:|||:.:........|:::..|||.|..::.|:
 Worm   721 KADFMAGALSGGQKRKLSLAIALIGGSEVVMLDEPTSGMDPGARHETWTLIQREKERRTILLTTH 785

  Fly   692 NVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVII-KKPHVPD-QPITDYINQFMQNI 754
            .:.||:.:.|||.|::.|.||..|:|.||:.::.....|.|: .....|| ...||.|.:::...
 Worm   786 FMEEADLLGDRIAIMAHGQLECCGSPMFLKQQYGDGYHLTIVYDTTSTPDVSKTTDIIREYIPEA 850

  Fly   755 EPENEIGDSLTYRLPVIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSDIYM----TLVTSFRL 815
            ...:.||...||.|...:||...||...||..:...||.:..|....:.::::    |....:..
 Worm   851 HVFSYIGQEATYLLSATHRPIFPKLFKELEDHQTQCGITSFGVSITTMEEVFLKVGHTADERYNY 915

  Fly   816 QQQMIPDVT----------QTFKYQV-VSQKQLTKQRMRAMFYKKMIH------------TAPNV 857
            :..:..|::          |..:.|| |:...|..|..:|||||:.|.            ..|..
 Worm   916 EHGIENDISEMIEKDDPILQDLRAQVRVTGFTLQMQHAKAMFYKRAIFFFRKWTQFLPQLVFPVA 980

  Fly   858 WPIIMIFTSFVLIAIIARLSVLLDMPKERQNSIHIGFREPEDVVKYLPNLKDCG-YIDI------ 915
            :.::|:|||.||.::            :.|:...|......|..|....:.|.| |:.:      
 Worm   981 YLVLMVFTSQVLPSV------------KEQDPQTISLAPFSDTKKAGHLVSDSGNYVTLLGGSQN 1033

  Fly   916 RSAVKVNKKKSVGVSRTFDD-----DSFVCEKGSYRNNLRKKNELRSFGAVESDGDEHLNGYISQ 975
            .|::.......:||::|..|     :.|:.::.:...:       |:||.      .:..|:: .
 Worm  1034 LSSMVQGTVTQLGVTQTVVDITSNVEKFIMDQTNAMGS-------RTFGL------HYALGFV-P 1084

  Fly   976 DMFH----SAPMMLNLLQNV-----ILRLSYPMQTDLVVLVE-----------NHPLP--TQLSQ 1018
            .||:    |.|.:.....|.     .|.:::   ||.::|.:           |||||  ||.:.
 Worm  1085 SMFNFSTVSVPSLKTFFNNFGLYTPALAITF---TDSMILSQKQKKQYSFTAVNHPLPPSTQDTL 1146

  Fly  1019 KINVLDNKIAHIHVPLVVGCIIPLTVSV--FVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWD 1081
            |.....:..|.:   :..|.|:...|.|  :...|:.|.....:.:|.::|:...:||.....||
 Worm  1147 KNTNRSDGAAFL---IAYGLIVSFAVCVAGYSQFLITERKKKSKHMQLLSGIRPWMFWLTAFIWD 1208

  Fly  1082 --WFT---------FFVYSVIIVVIMSLMGIGGFGFYENAIMVVLLTTF---GLAALPLTYLVSM 1132
              ||.         |:::::....            ::..:|::|..:|   |..|||.||....
 Worm  1209 AAWFVIRILCFDAIFYIFNITAYT------------HDFGVMLILTLSFLLYGWTALPFTYWFQF 1261

  Fly  1133 FVNKSIVRAFLVSV---LLQGVSGLVLYIIYWDVANSNTIFFYA---ACMSPGFSLLDGVSNVYA 1191
            |. :|..:.|::..   :|.|:.|.:...|....::.:..:.::   |.:.|.:: :..::.|..
 Worm  1262 FF-ESAPKGFMMVTMYHILTGMIGSIAVPIISQTSSLDAGYLWSIIFAWLFPTYN-ISQIATVTF 1324

  Fly  1192 QNLEQAICIDKCEATDSCTEENMNEVVPNCKF--------DTFFKWAAPGILPPILYMVLSALIF 1248
            ||....|.   |:..| ||......|...|..        :..|.....|||..::::.:..   
 Worm  1325 QNENVRIA---CKKLD-CTIPMFKAVTACCGTASERLYVDNVLFVGNRKGILVYVIFLAVQG--- 1382

  Fly  1249 LMLIFWIELHRREK-KFHTSRDLRKMRTATYPF---------DDGDVAD--------VKQKIAEA 1295
              .|:||.:..||. :|.....|.:.|.|..|.         |:.||.|        |.|::|..
 Worm  1383 --FIYWIWVFMRENDQFTKLFALIRCRKADNPIWDITDTDKVDERDVEDSDVIAEKSVVQRLANN 1445

  Fly  1296 DNTKAKQSVFLVDQVEARVPAAGKRIHTVSFALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFG 1360
            :.|.      ||.....:.......:..|:|.:|.....|:.|...:||:...:.|.|:...:.|
 Worm  1446 NKTA------LVSNNLVKWYGNFNAVKGVNFHVNSKDCFGLLGVNGAGKTSTFQMLTGENSISSG 1504

  Fly  1361 EIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLN 1425
            :.||.|...|.:........||.||:..::.|::..|.:.:...|||:||..|.:|::.:...:.
 Worm  1505 DAYVNGWSVKNNWREAGANTGYCPQYDAIIKEMSGEETLYMFARIRGIPEKDIPKKVNAVIHAIG 1569

  Fly  1426 MTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCGKTII 1490
            :..:..|:....:...:.:|.:.:|:|....:|:|||||.|:....||.|||||..:|..|..::
 Worm  1570 IGMYASRQIKTYSGGNKRRLSLGIAIVGLPDVLLLDEPTSGVDPKARRIIWNILNRLRDLGTALV 1634

  Fly  1491 FATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDV 1555
            ..::...||:.|...:.:....:....||.|:::.:|..|:.|.:||           :| |.|.
 Worm  1635 LTSHSMDECEALCTELAIMVYGKFRCYGSCQHIKSRYGSGYTLLIRL-----------KN-RNDA 1687

  Fly  1556 ENLAKFVNFLHN----RSELVGRLNNWFKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADM 1616
            |.....:.....    :.|.|.:||    |.:|.....:|.|:..:|.....||..||.:.|..:
 Worm  1688 EKTKSTIKQTFRGSVIKEEHVLQLN----FDIPRDGDSWSRLFEKLETVSTSLNWDDYSLSQTTL 1748

  Fly  1617 MSV 1619
            ..|
 Worm  1749 EQV 1751

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:463674 26/132 (20%)
rim_protein <514..1537 CDD:130324 261/1139 (23%)
abt-4NP_503175.1 rim_protein <270..1764 CDD:130324 347/1623 (21%)

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