DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and Abca2

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_006497672.1 Gene:Abca2 / 11305 MGIID:99606 Length:2464 Species:Mus musculus


Alignment Length:1959 Identity:382/1959 - (19%)
Similarity:706/1959 - (36%) Gaps:547/1959 - (27%)


- Green bases have known domain annotations that are detailed below.


  Fly    95 FTSEVTKNVAKTL-ELSSTVGYESESEMQNQFDERTTLAGIVFNDLRDDGTPLTLSISIRFPSEF 158
            |.|:|:.::.|.. :..|.|.|......|   |..|..|.::|...:|...|..:...||..|.|
Mouse   600 FMSKVSVDIFKGFPDEESIVNYTLNQAYQ---DNVTVFASVIFQTRKDGSLPPHVHYKIRQNSSF 661

  Fly   159 RTIAPFLTEDRLWITRCSGRINP---GRDRAKHDKQQDIYIREGFLQLQHQIFVEWYHQLRKDIV 220
                   ||....|.|...|..|   ||          .|...||:.:|        ..:.:.|:
Mouse   662 -------TEKTNEIRRAYWRPGPNTGGR----------FYFLYGFVWIQ--------DMMERAII 701

  Fly   221 STYPEPNVEVYNILLKAADEPCSVMSVAQLPTFLYNFIYLLPFLNI----------IRNVAAQVE 275
            :|:...:|......::....||....     .||:...:::|...:          |:::.|:.|
Mouse   702 NTFVGHDVVEPGNYVQMFPYPCYTRD-----DFLFVIEHMMPLCMVISWVYSVAMTIQHIVAEKE 761

  Fly   276 DGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIML-----------LAFWGFGGREGEFS 329
            ..:.......|.:..:.|...|:..|:::.|.....|.:|           |..|          
Mouse   762 HRLKEVMKTMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGQVLMHSHVLIIW---------- 816

  Fly   330 GTGTIAFVCFITLYTVEIIITGMVVAKLF-----ANPTNAVLFALMLWLFMYAAF---------- 379
                    .|:.:|.|..|:...:|:.|:     |:....:::.|....:||.|.          
Mouse   817 --------LFLAVYAVATIMFCFLVSVLYSKAKLASACGGIIYFLSYVPYMYVAIREEVAHDKIT 873

  Fly   380 ----CI----------ILERYWDIHKYYVFFILVAFCNCQMH-FSMSLFRNCIEKPEMVNTIDFV 429
                ||          :..:|:.:::       ||....|.| ||.|        |...:..:.:
Mouse   874 AFEKCIASLMSTTAFGLGSKYFALYE-------VAGVGIQWHTFSQS--------PVEGDDFNLL 923

  Fly   430 LIFTSAISSALIYFLILLAIQWRMPGTF-----------LSRRIVNNRPRKQQES-------DTT 476
            |..|..:...::|.::...|:...||.:           .|..:.:.|....:.|       ..:
Mouse   924 LAVTMLMVDTVVYGVLTWYIEAVHPGMYGLPRPWYFPLQKSYWLGSGRTEAWEWSWPWAHTPRLS 988

  Fly   477 IMYLGRAPSFQNFEFGDVGSVE--------LMRLRHVSTSHRDSERKILKNISMRIYRGEVFVIL 533
            :|...:|.:.::..|.:...:|        ::.:..::..:::.::..|..:|:.:|..:|...|
Mouse   989 VMEEDQACAMESRHFEETRGMEEEPTHLPLVVCVDKLTKVYKNDKKMALNKLSLNLYENQVVSFL 1053

  Fly   534 GHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEPN-GEARRLVDFRFDEHGLNKHLTVEQTIDYH 597
            ||.|:||.|.:.||.||..|..|:..|.|:..... .|.|:.:......:.|...||||:.:.::
Mouse  1054 GHNGAGKTTTMSILTGLFPPTSGSATIYGHDIRTEMDEIRKNLGMCPQHNVLFDRLTVEEHLWFY 1118

  Fly   598 VRLKLSPSESDRYEIERRKWLAILDQHVES-RGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEP 661
            .|||....|..|.|.::    .|.|..:.: |...:..||.|..:.:::.....|.:..|||:||
Mouse  1119 SRLKSMAQEEIRKETDK----MIEDLELSNKRHSLVQTLSGGMKRKLSVAIAFVGGSRAIILDEP 1179

  Fly   662 TTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSS 726
            |..:.....:..|.::...|..|..:::|:::.||:.:.|||.|:|.|.|:..|:|.||:..:..
Mouse  1180 TAGVDPYARRAIWDLILKYKPGRTILLSTHHMDEADLLGDRIAIISHGKLKCCGSPLFLKGAYGD 1244

  Fly   727 SVDLVIIKKPHVP----------------------DQPITDYINQFMQNIEPENEIGDSLTYRLP 769
            ...|.::|:|..|                      :..::.:|.:.:.:....::....|:|.||
Mouse  1245 GYRLTLVKQPAEPGTSQEPGLASSPSGCPRLSSCSEPQVSQFIRKHVASSLLVSDTSTELSYILP 1309

  Fly   770 --VIYRPRLQKLL---------IHL---------------------------EIDRK------ML 790
              .:.:...::|.         :||                           |.|.|      :.
Mouse  1310 SEAVKKGAFERLFQQLEHSLDALHLSSFGLMDTTLEEVFLKVSEEDQSLENSEADVKESRKDVLP 1374

  Fly   791 GIENVRVVG---------AELSDIYMTL-----VTSFR--------------------LQQQMIP 821
            |.|.:..||         :||:....:|     |.|.|                    ||.   |
Mouse  1375 GAEGLTAVGGQAGNLARCSELAQSQASLQSASSVGSARGEEGTGYSDGYGDYRPLFDNLQD---P 1436

  Fly   822 D--VTQTFKYQVVSQKQLTKQRMRAMFYK---------KMIHTAPN----VWPIIMIFTSFVLIA 871
            |  ..|..:.:.::|.....:::...:.|         |..|.|..    :...|::...||.:|
Mouse  1437 DNVSLQEAEMEALAQVGQGSRKLEGWWLKMRQFHGLLVKRFHCARRNSKALCSQILLPAFFVCVA 1501

  Fly   872 IIARLSV--LLDMP-------------KERQNSIHIGFRE-------------PEDVVK--YLPN 906
            :...|||  :.|:|             :.|.|.|.....|             |:.:|.  .||:
Mouse  1502 MTVALSVPEIGDLPPLVLSPSQYHNYTQPRGNFIPYANEERQEYRLRLSPDASPQQLVSTFRLPS 1566

  Fly   907 -------LKDCGYIDIRSAVKVNKKKSVGVSRTF------------------------------- 933
                   ||......:...:.::..:|..::..|                               
Mouse  1567 GVGATCVLKSPANGSLGPMLNLSSGESRLLAARFFDSMCLESFTQGLPLSNFVPPPPSPAPSDSP 1631

  Fly   934 ---DDDS-----------------------------------------FVCEK--GSYRNNLR-- 950
               |:||                                         |.|..  |.:...:|  
Mouse  1632 VSPDEDSLQAWNMSLPPTAGPETWTSAPSLPRLVHEPVRCTCSAQGTGFSCPSSVGGHPPQMRVV 1696

  Fly   951 ---------------------KKNELRSFGAVESDGDEHLNGYISQDM----------------- 977
                                 .:..|..:||:..       |.:.:.:                 
Mouse  1697 TGDILTDITGHNVSEYLLFTSDRFRLHRYGAITF-------GNVQKSIPASFGARVPPMVRKIAV 1754

  Fly   978 ------------FHSAPMMLNLLQNVILRLSYPMQ----TDLVVLVENHPLPTQLSQKINVLDNK 1026
                        :||.|..||.|.|.|||.:.|..    ....:.|.|||: .:.|..:: ||..
Mouse  1755 RRVAQVLYNNKGYHSMPTYLNSLNNAILRANLPKSKGNPAAYGITVTNHPM-NKTSASLS-LDYL 1817

  Fly  1027 IAHIHVPLVVGCIIPLTV--SVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYS 1089
            :....|.:.:..|:.::.  :.||:.||.|:....:.||.::|....::|..|..||...:.|.:
Mouse  1818 LQGTDVVIAIFIIVAMSFVPASFVVFLVAEKSTKAKHLQFVSGCNPVIYWLANYVWDMLNYLVPA 1882

  Fly  1090 VIIVVIMSLMGIGGFGFYENAIMVV-LLTTFGLAALPLTYLVSM-FVNKSIVRAFLVSV-LLQGV 1151
            ...|:|:.:..:..:....|...|: |...:|.:..|:.|..|. |...|....||:.: |..|:
Mouse  1883 TCCVIILFVFDLPAYTSPTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSSAYVFLIVINLFIGI 1947

  Fly  1152 SGLV----LYIIYWD----VANSNTIFFYAAC--MSPGFSLLDGVSNVYAQNLEQAICIDKCEAT 1206
            :..|    |.:...|    |.||    :..:|  :.|.::|..|:       :|.|.        
Mouse  1948 TATVATFLLQLFEHDKDLKVVNS----YLKSCFLIFPNYNLGHGL-------MEMAY-------- 1993

  Fly  1207 DSCTEENMNEVVPNC-KFDTF---FKWAAPGILPPILYMVLSALIFLMLIFWIELHRREKKFHTS 1267
                .|.:||..... :||..   |:|..  :...::.|.:...:...|....:       ::..
Mouse  1994 ----NEYINEYYAKIGQFDKMKSPFEWDI--VTRGLVAMTVEGFVGFFLTIMCQ-------YNFL 2045

  Fly  1268 RDLRKMRTATYPF-DDGDVADVKQKI--AEADNTKAK----QSVFLVDQVEARVPAAGKRIHTVS 1325
            |..:::..:|.|. ||.|||..:|::  .:|||...|    ..|:...:: .|:.|    :..:.
Mouse  2046 RQPQRLPVSTKPVEDDVDVASERQRVLRGDADNDMVKIENLTKVYKSRKI-GRILA----VDRLC 2105

  Fly  1326 FALNKYMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLL 1390
            ..:......|:.|...:||:...:.|.|......||.:|.|.....||..:...:||.||...|.
Mouse  2106 LGVRPGECFGLLGVNGAGKTSTFKMLTGDESTTGGEAFVNGHSVLKDLLQVQQSLGYCPQFDALF 2170

  Fly  1391 NELTPREHIRLLCMIRGVP---EAKIG----EKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIA 1448
            :|||.|||::|...:||:|   ||::.    ||       |.:|.:..:.....:...:.||..|
Mouse  2171 DELTAREHLQLYTRLRGIPWKDEAQVVKWALEK-------LELTKYADKPAGTYSGGNKRKLSTA 2228

  Fly  1449 LALVAYNKILVLDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSE 1513
            :||:.|...:.|||||.||....||.:||::..:...|::::..::...||:.|...:.:..:..
Mouse  2229 IALIGYPAFIFLDEPTTGMDPKARRFLWNLILDLIKTGRSVVLTSHSMEECEALCTRLAIMVNGR 2293

  Fly  1514 MLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNW 1578
            :..:||:|:|:.::..|:.:.||        .:|.:|    |:::.:|.|.....:.|..|.:..
Mouse  2294 LRCLGSIQHLKNRFGDGYMITVR--------TKSSQN----VKDVVRFFNRNFPEAMLKERHHTK 2346

  Fly  1579 FKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQADMMSVVAQVQETRAQLKHHLVQTEG---- 1639
            .::.:...||..:.::..||:....|.:.||.:.|..:.:|.....:.::.   ::.|.|.    
Mouse  2347 VQYQLKSEHISLAQVFSKMEQVVGVLGIEDYSVSQTTLDNVFVNFAKKQSD---NVEQQEAEPSS 2408

  Fly  1640 -PLPLDTTS 1647
             |.||...|
Mouse  2409 LPSPLGLLS 2417

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 25/158 (16%)
ABC2_membrane_4 <293..448 CDD:289500 33/195 (17%)
EcfA2 499..717 CDD:224047 59/219 (27%)
P-loop_NTPase 500..721 CDD:304359 61/222 (27%)
ABC2_membrane_3 <972..1254 CDD:289468 69/333 (21%)
EcfA2 1307..1521 CDD:224047 58/220 (26%)
P-loop_NTPase 1324..1524 CDD:304359 57/206 (28%)
Abca2XP_006497672.1 rim_protein 58..2398 CDD:130324 376/1938 (19%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C167838463
Domainoid 00.000 Not matched by this tool.
eggNOG 1 0.900 - - E2759_KOG0059
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 1 0.910 - -
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
54.750

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