Sequence 1: | NP_728408.3 | Gene: | CG1801 / 33104 | FlyBaseID: | FBgn0031171 | Length: | 1655 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_031404.1 | Gene: | Abca4 / 11304 | MGIID: | 109424 | Length: | 2310 | Species: | Mus musculus |
Alignment Length: | 1958 | Identity: | 390/1958 - (19%) |
---|---|---|---|
Similarity: | 711/1958 - (36%) | Gaps: | 483/1958 - (24%) |
- Green bases have known domain annotations that are detailed below.
Fly 54 ENENEQSIVSHKLQDINI---LTRMADSKREKTKYILAF---TPETTFTSEVTK-------NVA- 104
Fly 105 ----------KTLELSSTVGYESESEMQNQ----FDERTTLAGIVFNDLRDDGTPLTLSISIRFP 155
Fly 156 SEFRTIAPF-LTEDRLWITRCSG-RINPGRDRAKHDKQQDIYIREGFLQLQHQIFVEWYHQLRKD 218
Fly 219 IVST--YPEPNVEVYNILLKAADEPC----SVMSVAQ--LPTFL-YNFIYLLPFLNIIRNVAAQV 274
Fly 275 EDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIMLLAFWGFGGREGEFSGTGTIAFVCF 339
Fly 340 ITL--YTVEIIITGMVVAKLFANPTNAVLFALMLWLFMYAAFCIILERYW------DIHKYYVFF 396
Fly 397 ILVAF---CNCQMHF---SMSL-FRNCIEKPEMVNTIDFVLIFTSAISSALIYFLILLAIQWRMP 454
Fly 455 GT--------FL----------------SRRIVNNRPRKQQESDTTIMYLGRAPSFQN---FEFG 492
Fly 493 DVGSVELMRLRHVSTSHRDSERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGN 557
Fly 558 VYIMGNPFEPNGEARRLVDFRFDEHG-LNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAIL 621
Fly 622 DQ---HVESRGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKEN 683
Fly 684 RAFIIATYNVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKK------------- 735
Fly 736 -----------------PHVPDQPITDYINQFMQNI----EPENE----IGDSLTYRLP-VIYRP 774
Fly 775 RLQKLLIHLEIDRKM--LGIENVRVVGAELSDIYMTLVTSFRLQQQMI--------------PDV 823
Fly 824 TQTFKYQVVSQ-------------------------------KQLTKQRMRAMFYKKMIHT---- 853
Fly 854 ----APNVWPIIMIFTSFVLIAII------------------------------ARLSVLLDM-- 882
Fly 883 ----------------------------PKERQNSIHI--------------------------- 892
Fly 893 -------GFREPE------DVVKYLPNLKDCGYID------IRSAVK----VNKKKSVGVS---- 930
Fly 931 ---RTFDDDS---FVCEKGSYRN------NLRKKNELRSFGAVESDGDEHLNGYISQDMFHSAPM 983
Fly 984 MLNLLQNVILRLSYPMQTDLVVLVENHPLPTQLSQKINVLDNKIAHIHV------PLVVGCII-- 1040
Fly 1041 -PLTVSVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGF 1104
Fly 1105 GFYENA--------IMVVLLTTFGLAALPLTYLVSMF--VNKSIVRAFLVSVLLQGVSGLVLYII 1159
Fly 1160 YWDVANSNTIFFYAA------------CMSPG---FSLLDGVSNVYAQNLEQAICIDKCEATDSC 1209
Fly 1210 TEENMNEVVPNCKFDTFFKWAAPG------ILPPILYMVLSALI--FLMLIFWIELHRREKKFHT 1266
Fly 1267 SRDLRKMRTATYPFDDGDVADVKQKIAEADNTKAKQSVFLVDQV-EARVPAAGKRIHTVSFALNK 1330
Fly 1331 YMSMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTP 1395
Fly 1396 REHIRLLCMIRGVPEAKIGEKMHDLCLM-LNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILV 1459
Fly 1460 LDEPTCGMPATTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLR 1524
Fly 1525 YKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHIV 1589
Fly 1590 YSFLYGAMEKNKLRLNVSDYCIYQADM----MSVVAQVQET--------------RAQL--KHHL 1634
Fly 1635 VQTEGPLP 1642 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
CG1801 | NP_728408.3 | ABC2_membrane_3 | <246..379 | CDD:289468 | 26/137 (19%) |
ABC2_membrane_4 | <293..448 | CDD:289500 | 33/169 (20%) | ||
EcfA2 | 499..717 | CDD:224047 | 63/221 (29%) | ||
P-loop_NTPase | 500..721 | CDD:304359 | 66/224 (29%) | ||
ABC2_membrane_3 | <972..1254 | CDD:289468 | 71/323 (22%) | ||
EcfA2 | 1307..1521 | CDD:224047 | 53/215 (25%) | ||
P-loop_NTPase | 1324..1524 | CDD:304359 | 54/200 (27%) | ||
Abca4 | NP_031404.1 | rim_protein | 1..2271 | CDD:130324 | 382/1941 (20%) |
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 891..910 | 3/24 (13%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 1311..1344 | 1/32 (3%) | |||
Disordered. /evidence=ECO:0000256|SAM:MobiDB-lite | 2266..2310 | 8/21 (38%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838460 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.750 |