DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and abca12

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_031748843.1 Gene:abca12 / 101731410 XenbaseID:XB-GENE-6041943 Length:7516 Species:Xenopus tropicalis


Alignment Length:1909 Identity:402/1909 - (21%)
Similarity:713/1909 - (37%) Gaps:461/1909 - (24%)


- Green bases have known domain annotations that are detailed below.


  Fly    17 LNLWRR---------TLFEIV--ALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQDIN 70
            ||.|.:         .|.|::  :::..:|..|||            |...:..:.::..|..||
 Frog  5770 LNQWDKLQQAGTLIGRLQELLNNSVIDNILTNFLN------------TNASHINNTINSALNIIN 5822

  Fly    71 ILTRMADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSSTVGYESESEMQNQFDE----RTTL 131
            :|....::       |..|.|..|    |..|:...:..:......|..|||.:..|    ....
 Frog  5823 LLNTNINN-------IQQFQPIAT----VINNLLSCMTYNRIQPMNSVEEMQAKAVELQNNNKLF 5876

  Fly   132 AGIVFNDLRDDGTPLTLSISIRFPSEFR---TIAPFLTEDRLWITRCSGRINPGRDRAKHDKQQD 193
            |.:.| ||..:.|..: ..|...|.:.:   ::.|.|:||...|.:......|.....|:.:   
 Frog  5877 AAVAF-DLPSETTGQS-KASFNLPKQIKYTISMEPVLSEDTNIIRKSYWTPVPASSLNKYSR--- 5936

  Fly   194 IYIREGFLQLQHQIFVEWYHQLRKDIVSTYPEPNVEVYNILL--KAADEPCSVMSVAQLPTFLYN 256
                 ||:.||..|          |......:.|..|.|:.|  ::...||     .:...||.:
 Frog  5937 -----GFVYLQENI----------DRAIIEMQTNKSVANVGLQYQSVPFPC-----YKRDRFLAS 5981

  Fly   257 FIYLLP---------FLN-IIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLR---MCILG 308
            ..|.||         |:: .::.:..:.|  :.:|:  |....|:.....|...|:.   ..::.
 Frog  5982 MGYTLPIALMITWVLFISAFVKKIVHEKE--MRLHE--YMRMMGVNSSSHFCAWFIESASFLLIT 6042

  Fly   309 VIYTIMLLAFWGFGGREGEF--SGTGTIAFVCFITLYTVEIIITGMVVAKLFANPTNAVLFALML 371
            |...::||.|       |:.  |..|.|.|:.|:. |::.||....:::..|.|...|.|...::
 Frog  6043 VSILVLLLKF-------GQILPSSNGFILFLLFLD-YSLTIIAMSYLISVFFHNTNVAGLSGSLI 6099

  Fly   372 WLFMYAAFCIILERYWDIHKYYVFFILVAFCNCQMHFSMSLFRNCIE------------------ 418
            ::..:..|.:|..:    .....|......|    .||.:...|.|:                  
 Frog  6100 YIITFFPFIVIATK----SSVLSFSAKTLLC----IFSPTALSNAIQYVVYYEEQSVGIQWSNMY 6156

  Fly   419 -KPEMVNTIDFVLIFTSAISSALIYFLILLAIQWRMPG--------------------------- 455
             .|.:.:::.|..:.......|:||||:...|:...||                           
 Frog  6157 ISPLLGDSMTFGWLCWLLFIDAMIYFLVGFYIRMVFPGKYGIPAPWYFPFQMSFWLKCCGLESLR 6221

  Fly   456 -------TFLSRRIVNNRPRKQQESDTTIMYLGRAPSFQNFEFGD--VGSVELMRLRHVSTSHRD 511
                   ||.:....|...:|..|:|..        |....|..|  || |.|..|..|..|   
 Frog  6222 PTKSSGLTFTNIMADNIYHKKGAENDLC--------SLNEQEPNDLTVG-VSLHGLTKVFQS--- 6274

  Fly   512 SERKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFEPNGEARR--- 573
              :..:.|:::..|.|.:..:|||.|:||.|.|.:|.||.....|.:|:.|:....|.:..|   
 Frog  6275 --KTAVNNLNLNFYEGHITALLGHNGAGKTTTLSMLTGLFGASSGTIYVYGDDIRTNLDRARSNM 6337

  Fly   574 ----LVDFRFDEHGLNKHLTVEQTI--------DYHVRLKLSPSESDRYEIERRKWLAILDQHVE 626
                ..|..||.....:||.:..:|        ..|:.:|.:..::..|. .|.|          
 Frog  6338 GVCMQYDVHFDHLTTKEHLLLYGSIKAPHWTRAHLHIEVKRNLKDTGLYN-HRHK---------- 6391

  Fly   627 SRGVRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATY 691
                .:..||.|..:.:::|..|.|.:.::||:||||.:.....:..|.::..:|:::..|::|:
 Frog  6392 ----PVKALSGGMKRKLSICIALIGGSKVVILDEPTTGVDPCSRRSIWEVISKQKKDKTIILSTH 6452

  Fly   692 NVGEAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKK-PHVPDQP------ITDYINQ 749
            ::.|||.::|||..|..|.|:..|||.:|:.||.|...|.:.|| |:..:|.      :||.|..
 Frog  6453 HLDEAEVLSDRIAFLEQGGLKCCGTPLYLKQKFGSGYHLTLTKKFPNRENQEECDVELVTDLIKS 6517

  Fly   750 FMQNIEPENEIGDSLTYRLPVI-------YRPRLQKLLIHLEIDRKM--LGIENVRVVGAELSDI 805
            .:.....:.::|..|.|.||..       |...||.|      |.:|  |.|....:....:.::
 Frog  6518 HIPEACLKEDVGGELVYLLPSFNAEISGAYLSLLQAL------DSRMNDLHIGCYGISDTTIEEV 6576

  Fly   806 YMTL------------------------------------VTSFRLQQQMIPDVTQTFKYQVVSQ 834
            ::.|                                    :|::|...:....:|...|...|| 
 Frog  6577 FLKLTDNLDEDEQDAMAWSSTKTVVPIPNEENLHVQDELSLTNYRFTDRDDQPLTNEEKLTGVS- 6640

  Fly   835 KQLTKQRMRAMFYKKMIHTAPNVW---------PIIMIFTSFVLIAI-IARLS--------VLL- 880
              |..:::.|:|.|: .|.:...|         |::     ||:||: :..||        :|| 
 Frog  6641 --LLLKKIMAIFIKR-FHNSRRNWKGLISQVLLPVL-----FVVIAMGLGSLSSSAVSFPELLLT 6697

  Fly   881 -DMPKERQNSIHIG-FREPE----DVVKYLPNL--------KDC------------------GYI 913
             |:......|:..| :.|..    ..:...|.:        .:|                  |..
 Frog  6698 PDLYGTSSQSVAFGLYNESSSNLVSAMNSFPGIDNSCLNQNSNCLSQNGLGLWTSDNQSLSYGSC 6762

  Fly   914 DIRSAVKVNKKKSVGV--SRTFDDDSFVCEKG----SY--RNNL---RKKNELRSFG------AV 961
            :..:...|....|...  .|||.:.......|    ||  ..||   :|:....|||      .:
 Frog  6763 NCSTGAPVCDASSAAPPHRRTFSEQMLYNVSGYNMESYLLTTNLQFIQKRYGGWSFGIPWVSSKL 6827

  Fly   962 ESDGDEHLNGYISQDMF-----HSAPMMLNLLQNVILRLSYPM-QTD-LVVLVENHPLP---TQL 1016
            |:...::.|..||:..|     ||.|..:|...|.:||.:.|. ::| ..:.|.:.||.   .|.
 Frog  6828 ETLVPQNPNMTISKVWFNNDGPHSLPAFINSFSNFLLRTNLPSNESDQYSISVASKPLSGTVIQT 6892

  Fly  1017 SQKINVLDNKIAHIHVPLVVGCII---PLTVSVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINL 1078
            |..:.:::.        |:..|::   .:|.:.|...:|:|.....:.|||:||:|...:|..|.
 Frog  6893 STTVTLVNT--------LIALCVLAGYSITTASFATYVVKEHHSGAKRLQHIAGVGETCYWVTNF 6949

  Fly  1079 FWDWFTFFVYSVIIVVIMSLMGIGGFGFYEN-AIMVVLLTTFGLAALPLTYLVS-MFVNKSIVRA 1141
            .:|...:.:...:.:..:::..:..|..|.| ..|.:|...||.|.....||:: .|  ||...|
 Frog  6950 IYDSIIYLIPVSLSLATIAIFKLPAFYDYPNLGAMSLLFILFGFATFSWMYLLAGTF--KSPGNA 7012

  Fly  1142 FLVSV---LLQGVSGL----VLYIIYWDVANSNTIFFYAACMSPGFSLLDGVSNVYAQ------- 1192
            |:..|   |..|::.:    |:|.:|...:.|::.:   ..::..:::|..|..::.|       
 Frog  7013 FITYVSINLFIGINTIISTSVVYFLYVQRSPSDSDY---QSLNQTYTVLTDVFKIFPQFCFGYGM 7074

  Fly  1193 ---NLEQAICIDKCEATDSCTEENMNEVVPNCKFDTFFKWAAPGILPPILYMVLSAL------IF 1248
               :.:||:             :..:.:.........|..       .||..:|||:      .|
 Frog  7075 IMLSQQQAL-------------QMQSAIYGGTSTTNIFSM-------DILGWMLSAMAIQGAFCF 7119

  Fly  1249 LM-------LIFWIELHRREKKFHTSRDLRKMRTAT-YPFDDGDVADVKQKIAEADNTKAKQSVF 1305
            |:       :||..      |.|.....::.....| .|.:|.||...::::   |:.:|...:.
 Frog  7120 LLRLLINDGIIFSF------KSFVKRNCMKSYLVVTKNPEEDEDVRAERERV---DSGQADPDLL 7175

  Fly  1306 LVDQVEARVPAAGKRIHTVSFALNKYMSM------GIFGPRNSGKSHLMRQLVGQRGFAFGEIYV 1364
            .:..:.......||.:..|:   |..:|:      |:.|...:||:...:.|.|....:.|.|.|
 Frog  7176 QLQGLTKVYHHVGKNMVAVN---NMTLSIPAGECFGLLGVNGAGKTTTFKMLTGDVAPSKGNIQV 7237

  Fly  1365 RG--------LDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMIRGVPEAKIGEKMHDLC 1421
            |.        |.|..|..:    .||.||...|...||..||:.....:.|:||.||......|.
 Frog  7238 RNNAGNLENVLGFNTDWSA----FGYCPQEDALDELLTGEEHLYFYARLHGIPEKKIKAVSFSLL 7298

  Fly  1422 LMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPATTRREIWNIL--RYIRY 1484
            ..|.:..:..|..:..:...|.||..||||:....||:||||:.||...|:|.:|.|:  .....
 Frog  7299 QKLQLVQYKDRTTAAYSCGTRRKLSTALALIGRPSILLLDEPSSGMDPKTKRHLWKIISEEVKEK 7363

  Fly  1485 CGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLEVRLIRDGATLAESEE 1549
            |  .::..::...||:.|...:.:....:...|||||:::.::..||.:::.| :|.:.      
 Frog  7364 C--AVVLTSHSMEECEALCTRLAIMVKGKFQCIGSLQHIKSRFGSGFTVKMHL-KDSSV------ 7419

  Fly  1550 NLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHIVYSFLYGAMEKNKLRLNVSDYCIYQA 1614
                :||.|..|:......:.|..:.....:::|||.....:.::..:|.||..|::..:.:.|.
 Frog  7420 ----NVEALTSFMCRHFPNTYLKDQHFTMVEYHVPVTAGGVAGIFDLLEANKSDLDIIHFSVSQT 7480

  Fly  1615 DMMSVVAQVQETRAQLKHHLVQTE 1638
            .:..|.....:::....:..|.::
 Frog  7481 TLDEVFINFAQSQVSPDNSSVNSQ 7504

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 29/147 (20%)
ABC2_membrane_4 <293..448 CDD:289500 34/178 (19%)
EcfA2 499..717 CDD:224047 60/232 (26%)
P-loop_NTPase 500..721 CDD:304359 61/235 (26%)
ABC2_membrane_3 <972..1254 CDD:289468 68/326 (21%)
EcfA2 1307..1521 CDD:224047 61/229 (27%)
P-loop_NTPase 1324..1524 CDD:304359 61/215 (28%)
abca12XP_031748843.1 rim_protein 4..>82 CDD:130324
rim_protein 5675..7493 CDD:130324 401/1896 (21%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.010

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