DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and abca5

DIOPT Version :10

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:NP_001135599.1 Gene:abca5 / 100216156 XenbaseID:XB-GENE-1012902 Length:1639 Species:Xenopus tropicalis


Alignment Length:1800 Identity:377/1800 - (20%)
Similarity:705/1800 - (39%) Gaps:376/1800 - (20%)


- Green bases have known domain annotations that are detailed below.


  Fly     4 SKGLLFKRYIRIELNLWRRTLFEIVALVIMVLVIFLNPIAHSKRLLYTTTENENEQSIVSHKLQD 68
            :|.||:|.|: |:....|.::.||:..:|..|:          .||:.:..   |||  .|....
 Frog    14 TKTLLYKNYL-IKCRTKRDSIQEILYPIIWWLI----------SLLWASMV---EQS--KHYEAM 62

  Fly    69 INILTRMADSKREKTKYILAFTPETTFTSEVTKNVAKTLELSSTV--GYESESEMQ---NQFDER 128
            .|.|....|....: ..|:.:|||:..|..:....|....|:...  .|..|..|:   :.|:|.
 Frog    63 PNTLLGGLDGPSSR-HLIIGYTPESNITQHIMAMTASECYLTDITFKPYLDEEHMKTASSSFEEH 126

  Fly   129 TTLAGIVFNDLRDDGTPLTLSISIRF-----PSEFRTIAPFLTED-RLWITRCSGRINPGRDRAK 187
              ..|:||::        .:|..:||     |.....:.|  .|| .||....|.          
 Frog   127 --FVGVVFDN--------AMSYKLRFSVYSVPDSTLYMTP--REDCHLWNCEASE---------- 169

  Fly   188 HDKQQDIYIREGFLQLQHQI----------FVEWYHQLRKDIVSTYPEPNVEVYNILLKAADEPC 242
                   |....|..||..|          :..| .:|:........|..|.|.:....|.....
 Frog   170 -------YFYSTFTYLQACIDSSMIKMKTNYSAW-EELKSTRAVIMGEQEVIVVDTFYHALMSVF 226

  Fly   243 SVMSVAQLPTFLYNFIYLLPFLNIIRNVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCIL 307
            .||:.:.|.       |.:.|. ::.....:|::.:.:...| ..:|.:.|.:.:....|   ::
 Frog   227 LVMAFSPLG-------YSVAFY-VVFEKEKKVKEFMKLMGLH-DTAFWLPWVLLYTGFIL---VI 279

  Fly   308 GVIYTIMLLAFWGFGGREGEFSGTGTIAFVCFI--TLYTVEIIITGMVVAKLFANP--TNAVLFA 368
            .::..::...|:.|         :.:..|:.|:  .||.:.:::..:::|.||.|.  ..|::|.
 Frog   280 SLVMAVVATTFFPF---------SKSNCFLIFLLYALYGISLVLFALMLAPLFKNSKRAGAIVFL 335

  Fly   369 LMLWLFMYAAFCIILERYWDIHKYYVFFILVAFCNCQMHFSMSLFRNCIEKPEMVNTIDF----- 428
            ..|.|.....|.::.|   |..|.:|:| ...||.|.....::         ::::..||     
 Frog   336 STLALGAVGIFIVLKE---DFPKSFVWF-FSPFCQCTFMIGIA---------QVLHLEDFQRGAQ 387

  Fly   429 -----------VLIFTSAISSALIYFLILLAIQWRMPGTFLSRR--IVNNRP-----RKQQESDT 475
                       |:.|...:..:::|.|:...:...:||.:..|:  ....:|     ||::..:.
 Frog   388 FTHLKDGPYPLVITFIFLVVDSVMYLLLATYLDQVLPGEYGLRQSPFFFLKPSYWSKRKKRYGEL 452

  Fly   476 TIMYLGRAPSFQNFEFGDVGSVEL-----MRLRHVSTSHR--DSERKILKNISMRIYRGEVFVIL 533
            ...|..||....  |..:..|.||     :|:..:..|.|  :..|..|:.::..||.|::..::
 Frog   453 NESYFDRAVDMS--EVIEPVSAELHGKEAIRICCICKSFRKNNKPRNALQGLTFDIYEGQITALV 515

  Fly   534 GHIGSGKLTLLRILAGLKFPLRGNVYIMGN---PFEPNGEARRL------VDFRFDEHGLNKHLT 589
            ||.|:||.||:.||.||..|..|...:.|:   ..:...||.::      .|..||.      ||
 Frog   516 GHSGTGKTTLMNILCGLCPPTEGFATVYGHRVTDIDEIQEASKMTGICQQTDIFFDV------LT 574

  Fly   590 VEQTIDYHVRLKLSPSESDRYEIERRKWLAILD----QHVESRGVRIGKLSSGSMKLVALCCCLA 650
            ||:.:  |:...|...:....|.|..|.|..||    :|..:|     .||.|..:.:::...:.
 Frog   575 VEENL--HIFASLRGIDEKTKEQEINKILFDLDMQALKHNHAR-----TLSIGQKRKLSVAIAVL 632

  Fly   651 GDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVGEAEHVADRIGILSMGVLEASG 715
            |:..:::|:|||..:........|.::...|.....:.:|:.:.||:.:|||..::|.|.|:..|
 Frog   633 GNPKVLLLDEPTAGMDSCSRHTVWDLLKKRKGKHVTVFSTHCMEEADILADRKAVISQGSLKCIG 697

  Fly   716 TPFFLRSKFSSSVDLVI-IKKPHVPDQPITDYINQFMQNIEPENEIGDSLTYRLPVIYRPRLQKL 779
            :..||:||:.....|.: ||||...| .::..|.|.:.......:..:||.|.||:....:...|
 Frog   698 SSLFLKSKWGVGYRLSMDIKKPCDVD-ALSSLITQHISGASLMQQSENSLLYSLPLKDVSKFPGL 761

  Fly   780 LIHLEIDRKMLGIENVRVVGAELSDIYMTLVTSFRLQQ----------------QMIPDVTQ-TF 827
            ...|: ....|||....|....|.|::..|.|...:.|                :.:.|:.| ..
 Frog   762 FSALD-SGSDLGIITYGVSATTLEDVFFKLETEAEIDQTDGIFNQRNLEDEGKWKSMEDIEQGLL 825

  Fly   828 KYQV------VSQKQLTKQRMRAM--FYKKMIHTAPNVWPIIMIFTSFVLI-------------A 871
            :..:      |:...|.||::.|:  .:.:.:|.....:..:.:...|.|:             .
 Frog   826 ELSLESSPCSVTGSALWKQQVAAVAKLHFRNLHRESKSFRCVCLCLLFFLVPQLTLYFLGLSYHQ 890

  Fly   872 IIARLSVLLDM----PKERQNSIHIGFREPEDVVKYLPNLKDCGYIDIRSAVKVNKKKSVGVSRT 932
            .:|.:.:..||    ||::.:             |:|.:|.      ::::...|..:.:|    
 Frog   891 SLAPIRLSADMYFSHPKQKSH-------------KFLTSLL------LQNSTGTNLDELLG---- 932

  Fly   933 FDDDSFVCEKGSYRNNLRKKNELRSFGAVESDGDEH---LNGYIS-----------QDMFHSAPM 983
                        ..|:.:.|.:|.: |:.......|   ||.::|           ..|.||.|:
 Frog   933 ------------NLNSQKIKVDLIN-GSDYMSASPHNAALNVFLSGKHYTYEAIFNSSMVHSLPV 984

  Fly   984 MLNLLQNVILRLSYPMQTDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLTVSVFV 1048
            ::|.:.|.:||   .:..:..:.|.|.|...........||......::.::.|          :
 Frog   985 LINTISNSLLR---QLGVNESIEVWNSPFYQDFLHTSYGLDFYFLIAYLGIMTG----------M 1036

  Fly  1049 IPLVE-EEIYDVRFLQH----MAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGI-GGFGFY 1107
            :|.:. |..|:.:...:    ||||....:|......|...||:  :::.::.|::.. .|...:
 Frog  1037 LPYIAMENAYNHKVKAYSQLKMAGLYPSAYWVGQAVVDIPLFFL--MLLFMVGSMLAFKSGIDLH 1099

  Fly  1108 ENAIMVVLLTTFGL--AALPLTYLVSM---FVNK-----SIVRAFLVSVLLQGVSGLVLYIIYWD 1162
            ...::.::....|.  |.:.|||:||.   .:|.     |::.|...|:.:..:...:.:     
 Frog  1100 AGTVLAMIFCLIGYVPAVVLLTYVVSFTYKLINDTRQWWSLIFAVTASISIIIIEAAIFF----- 1159

  Fly  1163 VANSNT-----IFFYAACMSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNCK 1222
             |:|.|     :||  :...|.:.||..::           |..|.         :.|....:.|
 Frog  1160 -ASSVTVTRLHVFF--SIFFPVYPLLGCLT-----------CFIKM---------SRNLAHSDVK 1201

  Fly  1223 FDTFFKWAAPGILPPILYMVLSALIFLMLIFWIELH------RREKKFHT-SRDLRKMRTATYPF 1280
            ..|........:..|.::.    |||.:::.::|:.      |::..|.: ::..:..:.|..|.
 Frog  1202 GLTQLGRLLVAVFAPYVHF----LIFFLILRYLEMKYGGRSIRKDPVFRSQTKKTKPWKFAEVPE 1262

  Fly  1281 D-DGDVADVKQKIAE--ADNTKAKQSVFLVDQVEARVPAAGKRI----------HTVSFALNKYM 1332
            | |.||...:.::.|  |.:...|..| ||..:.......||.|          :.|||.:.|..
 Frog  1263 DEDEDVKVERARVGEYMAPDCNEKPMV-LVSGLHKEQDQTGKTILGKAMRKLVVNNVSFCVRKGE 1326

  Fly  1333 SMGIFGPRNSGKSHLMRQLVGQRGFAFGEIYV-------RGLDFKYDLESIHTYMGYSPQHRGLL 1390
            ::|:.||..:|||.|:..:|||.....|:|.:       .||       |...::|||||.....
 Frog  1327 TVGLVGPNGAGKSTLLNMMVGQSELNAGQILMGDPAAGEPGL-------SPPRFLGYSPQTNYFW 1384

  Fly  1391 NELTPREHIRLLCMIRGVPEAKIGEKMHDLCLMLNMTGWMHRKCSLLTAEKRHKLKIALALVAYN 1455
            .|:..:||:.....|:|:....:.|....:...|::...:......|:...:.||..||:::...
 Frog  1385 PEIKLQEHLETYGAIKGMGSNVLKEVTRRIVETLDLKDHLQEPAKKLSVGNQRKLSFALSMLGNP 1449

  Fly  1456 KILVLDEPTCGMPATTRREIWNILR-YIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGS 1519
            .|::|:||:.||....::.:|.::| .::...:..:..|:...|.:.:.|.:.:....::..|||
 Frog  1450 DIVLLEEPSTGMDPKNKQIMWKVIRTTLKGKEQAAVITTHSMEEAEAICDRVAIMVSGQLRYIGS 1514

  Fly  1520 LQYLRYKYSHGFYLEVRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVP 1584
            :|:|:.|:...|.||::|  |....:::.|.|.|::  |..|.|..|..|     .::...:.||
 Frog  1515 VQHLKSKFGRYFSLELKL--DTRARSQNVEFLHKEI--LQIFPNASHQES-----FSSLMSYKVP 1570

  Fly  1585 VGHI-VYSFLYGAMEKNKLRLNVSDYCIYQADMMSV---VAQVQE 1625
            ...: ..|..:..:|:.|...|:.:|...||.:..|   :|:.||
 Frog  1571 KEDVESLSQTFSKLEQVKQMYNIEEYIFSQATLEQVFIELAKEQE 1615

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:463674 22/136 (16%)
rim_protein <514..1537 CDD:130324 243/1141 (21%)
abca5NP_001135599.1 rim_protein <87..1616 CDD:130324 352/1709 (21%)

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