DRSC/TRiP Functional Genomics Resources

powered by:
logo

back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment CG1801 and abca2

DIOPT Version :9

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_005165286.1 Gene:abca2 / 100006090 ZFINID:ZDB-GENE-050517-1 Length:2504 Species:Danio rerio


Alignment Length:2002 Identity:382/2002 - (19%)
Similarity:690/2002 - (34%) Gaps:620/2002 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TTFTSEVTKNVAKTLELSSTVGYESESEMQN------QFDERTTLAGIVFNDLRDDGTPLTLSIS 151
            |.|.|:|:.::.:        |:..|..:.|      ..|..:..|.::|...:|...|..:...
Zfish   622 TNFMSKVSVDIFR--------GFPDEESIVNYTLNQAYHDNVSVFASVIFQTNKDGSLPPHVMYK 678

  Fly   152 IRFPSEFRTIAPFLTEDRLWITRCSGRINP---GRDRAKHDKQQDIYIREGFLQLQHQIFVEWYH 213
            ||..|.|       ||....|.|...|..|   |:          .|...||:.:|..|      
Zfish   679 IRQNSSF-------TEKTNEIRRAYWRPGPNTGGK----------FYFLYGFVWIQDMI------ 720

  Fly   214 QLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSVAQLPTFLYNFIYLLPFLNI----------IR 268
              .:.|::|:...:|......::....||....     .||:...:::|...:          |:
Zfish   721 --ERAIINTFVGHDVVEPGNYVQMFPYPCYTRD-----DFLFVIEHMMPLCMVISWVYSVAMMIQ 778

  Fly   269 NVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIML-----------LAFWGFG 322
            ::.|:.|..:.......|.:..:.|...|:..|:::.|.....|.:|           ...|   
Zfish   779 HIVAEKEQRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLLHSDPFIIW--- 840

  Fly   323 GREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLF-----ANPTNAVLFALMLWLFMYAAFCII 382
                           .|:|:|.|..|:...:|:.|:     |:....:::.|.            
Zfish   841 ---------------LFLTIYAVATIMFCFLVSVLYSKAKLASACGGIIYFLS------------ 878

  Fly   383 LERYWDIHKYYVFFILVAFCNCQMHFSMSLFRNCIEKPEMVNTIDFVLIFTSAISSALIYFLIL- 446
                      ||.::.||......|..::.|..||..          |:.|:|......||.:. 
Zfish   879 ----------YVPYMYVAIREEVAHDKITAFEKCIAS----------LMSTTAFGLGSKYFALYE 923

  Fly   447 ---LAIQWRMPGTFLSRRIVNNRPRKQQESDTTI-------------------------MY-LGR 482
               :.|||         |.:|..|.:..:.:..:                         || |.|
Zfish   924 VAGVGIQW---------RTINQSPVEGDDFNLLLSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPR 979

  Fly   483 A---PSFQNFEFGDVGSVEL--------MRL------RHVSTSHRDSE----------------- 513
            .   |..:::..|. |.:|.        .||      :..:..||.||                 
Zfish   980 PWYFPLQKSYWLGS-GRIETWEWPWGGGTRLSVMEEDQACAMEHRRSEETRGIEEEPNHLPLVVC 1043

  Fly   514 ------------RKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFE 566
                        :..|..:|:.::..:|...|||.|:||.|.:.||.||..|..|:..|.|:...
Zfish  1044 IDKLTKVYKTGSKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIR 1108

  Fly   567 PNGEARRLVDFRFDEHG-LNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVES-RG 629
            ...|..|.......:|. |...|:||:.:.::.|||....|..|.|:::    .|.|..:.: |.
Zfish  1109 TEMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSRLKGMAEEDIRKEMDK----MIEDLELSNKRH 1169

  Fly   630 VRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVG 694
            ..:..||.|..:.:::.....|.:..:||:|||..:.....:..|.::...|:.|..:::|:::.
Zfish  1170 SLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMD 1234

  Fly   695 EAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKK---PHVPDQP-------------- 742
            ||:.:.|||.|:|.|.|:..|:|.||:|.:.....|.::||   .|..||.              
Zfish  1235 EADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSDSHTADQSSQSPSSSISPCSEN 1299

  Fly   743 -ITDYINQFMQNIEPENEIGDSLTYRLP--VIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSD 804
             :|.:|.|::.:....::....|:|.||  .:.:...::|...||.....|.:.:..|:...|.:
Zfish  1300 RVTQFIRQYVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDSLALTSFGVMDTTLEE 1364

  Fly   805 IYMTL-VTSFRLQQQ---------------------------------MIPDV--TQTFKYQVVS 833
            :::.: .....|:..                                 |.|:|  :.......:|
Zfish  1365 VFLKVSEEDLSLENSDADMKDSPGGASAGKPSGLLGGPQCEGAPAAAVMRPEVELSNLMMCSRLS 1429

  Fly   834 QKQLTKQRMRAM-------------FY-------------------------------------- 847
            ..|.:.|...::             ||                                      
Zfish  1430 PSQASLQSGSSLGSVRGDEGGPYSEFYGDYCPLFDNGQDLDSASLRDEESSPQPTVLEGQGSFKL 1494

  Fly   848 --------------KKMIHTA----PNVWPIIMIFTSFVLIAIIARLSV--------LLDMPKER 886
                          .|..|.|    ..::..|::...||.:|:...|||        |:..|.:.
Zfish  1495 DGWWLKLRQFHGLIVKRFHCAKRNTKGIFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSPSQY 1559

  Fly   887 QNSIHIGFREP---------EDVVKYLPNLK-DCGYIDIRSAVKV-------------------- 921
            .|     :.:|         ||..:|..... |.|...|.:.:::                    
Zfish  1560 HN-----YTQPRGNFIPYANEDRSQYRTKFSPDAGPQRIVNTLRLPSGVGATCILKTPFNSTLDQ 1619

  Fly   922 ---------NKKKSVGVSRTFD--------------------------DD--------------- 936
                     |..|:: .:|.||                          ||               
Zfish  1620 LAQTLNPYANNSKTL-AARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPEAHFEDGLWNYTAA 1683

  Fly   937 -------------------------------SFVCEKG-------------------SYRN---- 947
                                           .|.|..|                   :.||    
Zfish  1684 PTTVREMATSPPTLPLSIHEPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEY 1748

  Fly   948 ------NLR------------KKNELRSFG----------AVESDGDEHLN--GYISQDMFHSAP 982
                  .||            :|:...|||          ||........|  ||      ||.|
Zfish  1749 LLYTSDRLRLHRYGGFTVGNIQKSVPASFGRKTPPMVRKIAVRRSSQVLYNNKGY------HSMP 1807

  Fly   983 MMLNLLQNVILRLSYPMQ----TDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLT 1043
            ..||:|.|.|||.:.|..    :...:.|.|||: .:.|..:: ||..:....|.:.:..|:.::
Zfish  1808 TYLNVLNNAILRANLPSSKGNPSAYGITVTNHPM-NRTSASLS-LDYLLQGTDVVIAIFIIVAMS 1870

  Fly  1044 V--SVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGFGF 1106
            .  :.||:.||.|:....:.||.::|.....:|..|..||...:.|.:...|:|:.:..:..:..
Zfish  1871 FVPASFVVFLVAEKSTKAKHLQFVSGCDPVTYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTS 1935

  Fly  1107 YENAIMVV-LLTTFGLAALPLTYLVSM-FVNKSIVRAFLVSV-LLQGVSGLV----LYIIYWD-- 1162
            ..|...|: |...:|.:..|:.|..|. |...|....||:.: |..|::..|    |.:...|  
Zfish  1936 PTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFERDKD 2000

  Fly  1163 --VANSNTIFFYAAC--MSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNC-K 1222
              :.||    :..:|  :.|.::|..|:       :|.|.            .|.:||..... :
Zfish  2001 LKLVNS----YLKSCFLIFPNYNLGHGL-------MEMAY------------NEYINEYYAKIGQ 2042

  Fly  1223 FDTF---FKWAAPGILPPILYMVLSALI-FLMLIFWIELHRREKKFHTSRDLRKMRTATYPF--D 1281
            ||..   |:|..  :...::.|.:...: ||:.|..        :::..|..:::...:.|.  |
Zfish  2043 FDKVKSPFEWDI--VTRGLVAMTIEGFVGFLITILC--------QYNFLRKAQRVPVNSQPVEDD 2097

  Fly  1282 DGDVADVKQKI--AEADNTKAKQSVFLVDQV----EARVPAAGKRIHTVSFALNKYMSMGIFGPR 1340
            |.|||..::::  .:|||...|     :|.:    ::|.......:..:...:......|:.|..
Zfish  2098 DVDVACERRRVLRGDADNDMLK-----IDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVN 2157

  Fly  1341 NSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMI 1405
            .:||:...:.|.|......||.:::......:|..:...:||.||...|.::||.|||:.|...:
Zfish  2158 GAGKTTTFKMLTGDESTTGGEAFIQEHSILRELLRVQQSIGYCPQFDALFDDLTAREHLELYTRL 2222

  Fly  1406 RGVPEAKIGEKMHDLCL-MLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPA 1469
            ||:| .|..|::....| .|.::.:..:.....:...:.||..|:||:.|..::.|||||.||..
Zfish  2223 RGIP-WKDEERVVQWALEKLELSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDP 2286

  Fly  1470 TTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLE 1534
            ..||.:||::..|...|::::..::...||:.|...:.:..:.....:||:|:|:.::..|:.:.
Zfish  2287 KARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMIT 2351

  Fly  1535 VRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHIVYSFLYGAMEK 1599
            ||.    .|.|..:|.:|        |.|.....:.|..|.:...::.:...:|..:.::..||:
Zfish  2352 VRT----KTTASVKEVIR--------FFNRNFPEAILKERHHTKIQYQLKSENISLAQVFSKMEQ 2404

  Fly  1600 NKLRLNVSDYCIYQADMMSVVAQVQETRAQLKHHLVQTEGPLPLDTTSPKKG 1651
            ....|::.||.:.|..:.:|.....:.::.   :|.|.|       :||..|
Zfish  2405 VVEVLSIEDYSVSQTTLDNVFVNFAKKQSD---NLEQQE-------SSPSSG 2446

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:289468 23/158 (15%)
ABC2_membrane_4 <293..448 CDD:289500 29/174 (17%)
EcfA2 499..717 CDD:224047 63/262 (24%)
P-loop_NTPase 500..721 CDD:304359 65/257 (25%)
ABC2_membrane_3 <972..1254 CDD:289468 71/305 (23%)
EcfA2 1307..1521 CDD:224047 53/218 (24%)
P-loop_NTPase 1324..1524 CDD:304359 52/200 (26%)
abca2XP_005165286.1 rim_protein 1..2435 CDD:130324 376/1982 (19%)
ABC_subfamily_A 1042..1261 CDD:213230 59/222 (27%)
ABC_subfamily_A 2118..2341 CDD:213230 55/228 (24%)


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 1 0.930 - - C170582253
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoDB 1 1.010 - - D131191at2759
OrthoFinder 1 1.000 - - FOG0000051
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
SwiftOrtho 1 1.000 - -
TreeFam 00.000 Not matched by this tool.
ZFIN 00.000 Not matched by this tool.
43.940

Return to query results.
Submit another query.