DRSC/TRiP Functional Genomics Resources

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Protein Alignment CG1801 and abca2

DIOPT Version :10

Sequence 1:NP_728408.3 Gene:CG1801 / 33104 FlyBaseID:FBgn0031171 Length:1655 Species:Drosophila melanogaster
Sequence 2:XP_005165287.2 Gene:abca2 / 100006090 ZFINID:ZDB-GENE-050517-1 Length:2503 Species:Danio rerio


Alignment Length:2002 Identity:382/2002 - (19%)
Similarity:690/2002 - (34%) Gaps:620/2002 - (30%)


- Green bases have known domain annotations that are detailed below.


  Fly    93 TTFTSEVTKNVAKTLELSSTVGYESESEMQN------QFDERTTLAGIVFNDLRDDGTPLTLSIS 151
            |.|.|:|:.::.:        |:..|..:.|      ..|..:..|.::|...:|...|..:...
Zfish   621 TNFMSKVSVDIFR--------GFPDEESIVNYTLNQAYHDNVSVFASVIFQTNKDGSLPPHVMYK 677

  Fly   152 IRFPSEFRTIAPFLTEDRLWITRCSGRINP---GRDRAKHDKQQDIYIREGFLQLQHQIFVEWYH 213
            ||..|.|       ||....|.|...|..|   |:          .|...||:.:|..|      
Zfish   678 IRQNSSF-------TEKTNEIRRAYWRPGPNTGGK----------FYFLYGFVWIQDMI------ 719

  Fly   214 QLRKDIVSTYPEPNVEVYNILLKAADEPCSVMSVAQLPTFLYNFIYLLPFLNI----------IR 268
              .:.|::|:...:|......::....||....     .||:...:::|...:          |:
Zfish   720 --ERAIINTFVGHDVVEPGNYVQMFPYPCYTRD-----DFLFVIEHMMPLCMVISWVYSVAMMIQ 777

  Fly   269 NVAAQVEDGVMVHQWHYGYSFGMQWGIKFLVLFLRMCILGVIYTIML-----------LAFWGFG 322
            ::.|:.|..:.......|.:..:.|...|:..|:::.|.....|.:|           ...|   
Zfish   778 HIVAEKEQRLKEVMKMMGLNNAVHWVAWFITGFVQLSISVTALTAILKYGKVLLHSDPFIIW--- 839

  Fly   323 GREGEFSGTGTIAFVCFITLYTVEIIITGMVVAKLF-----ANPTNAVLFALMLWLFMYAAFCII 382
                           .|:|:|.|..|:...:|:.|:     |:....:::.|.            
Zfish   840 ---------------LFLTIYAVATIMFCFLVSVLYSKAKLASACGGIIYFLS------------ 877

  Fly   383 LERYWDIHKYYVFFILVAFCNCQMHFSMSLFRNCIEKPEMVNTIDFVLIFTSAISSALIYFLIL- 446
                      ||.::.||......|..::.|..||..          |:.|:|......||.:. 
Zfish   878 ----------YVPYMYVAIREEVAHDKITAFEKCIAS----------LMSTTAFGLGSKYFALYE 922

  Fly   447 ---LAIQWRMPGTFLSRRIVNNRPRKQQESDTTI-------------------------MY-LGR 482
               :.|||         |.:|..|.:..:.:..:                         || |.|
Zfish   923 VAGVGIQW---------RTINQSPVEGDDFNLLLSMVMLTIDAIVYGVLTWYIEAVHPGMYGLPR 978

  Fly   483 A---PSFQNFEFGDVGSVEL--------MRL------RHVSTSHRDSE----------------- 513
            .   |..:::..|. |.:|.        .||      :..:..||.||                 
Zfish   979 PWYFPLQKSYWLGS-GRIETWEWPWGGGTRLSVMEEDQACAMEHRRSEETRGIEEEPNHLPLVVC 1042

  Fly   514 ------------RKILKNISMRIYRGEVFVILGHIGSGKLTLLRILAGLKFPLRGNVYIMGNPFE 566
                        :..|..:|:.::..:|...|||.|:||.|.:.||.||..|..|:..|.|:...
Zfish  1043 IDKLTKVYKTGSKLALNKLSLNLHENQVVSFLGHNGAGKTTTMSILTGLFPPTSGSATIYGHDIR 1107

  Fly   567 PNGEARRLVDFRFDEHG-LNKHLTVEQTIDYHVRLKLSPSESDRYEIERRKWLAILDQHVES-RG 629
            ...|..|.......:|. |...|:||:.:.::.|||....|..|.|:::    .|.|..:.: |.
Zfish  1108 TEMERIRQNLGMCPQHNVLFDKLSVEEHLWFYSRLKGMAEEDIRKEMDK----MIEDLELSNKRH 1168

  Fly   630 VRIGKLSSGSMKLVALCCCLAGDTPIIILEEPTTQLTGREAQIFWSIVHAEKENRAFIIATYNVG 694
            ..:..||.|..:.:::.....|.:..:||:|||..:.....:..|.::...|:.|..:::|:::.
Zfish  1169 SLVQTLSGGMKRKLSVAIAFVGGSRAVILDEPTAGVDPYARRAIWDLILKYKQGRTILLSTHHMD 1233

  Fly   695 EAEHVADRIGILSMGVLEASGTPFFLRSKFSSSVDLVIIKK---PHVPDQP-------------- 742
            ||:.:.|||.|:|.|.|:..|:|.||:|.:.....|.::||   .|..||.              
Zfish  1234 EADLLGDRIAIISHGKLKCCGSPLFLKSTYGDGYKLTLVKKQSDSHTADQSSQSPSSSISPCSEN 1298

  Fly   743 -ITDYINQFMQNIEPENEIGDSLTYRLP--VIYRPRLQKLLIHLEIDRKMLGIENVRVVGAELSD 804
             :|.:|.|::.:....::....|:|.||  .:.:...::|...||.....|.:.:..|:...|.:
Zfish  1299 RVTQFIRQYVASCLLVSDSNTELSYVLPSEAVKKGCFERLFQALEQSLDSLALTSFGVMDTTLEE 1363

  Fly   805 IYMTL-VTSFRLQQQ---------------------------------MIPDV--TQTFKYQVVS 833
            :::.: .....|:..                                 |.|:|  :.......:|
Zfish  1364 VFLKVSEEDLSLENSDADMKDSPGGASAGKPSGLLGGPQCEGAPAAAVMRPEVELSNLMMCSRLS 1428

  Fly   834 QKQLTKQRMRAM-------------FY-------------------------------------- 847
            ..|.:.|...::             ||                                      
Zfish  1429 PSQASLQSGSSLGSVRGDEGGPYSEFYGDYCPLFDNGQDLDSASLRDEESSPQPTVLEGQGSFKL 1493

  Fly   848 --------------KKMIHTA----PNVWPIIMIFTSFVLIAIIARLSV--------LLDMPKER 886
                          .|..|.|    ..::..|::...||.:|:...|||        |:..|.:.
Zfish  1494 DGWWLKLRQFHGLIVKRFHCAKRNTKGIFSQILLPAFFVCVAMTVALSVPEIGDLPPLILSPSQY 1558

  Fly   887 QNSIHIGFREP---------EDVVKYLPNLK-DCGYIDIRSAVKV-------------------- 921
            .|     :.:|         ||..:|..... |.|...|.:.:::                    
Zfish  1559 HN-----YTQPRGNFIPYANEDRSQYRTKFSPDAGPQRIVNTLRLPSGVGATCILKTPFNSTLDQ 1618

  Fly   922 ---------NKKKSVGVSRTFD--------------------------DD--------------- 936
                     |..|:: .:|.||                          ||               
Zfish  1619 LAQTLNPYANNSKTL-AARYFDSMCLDSFTQGVPLSNFVPPPPSPAPSDDPEAHFEDGLWNYTAA 1682

  Fly   937 -------------------------------SFVCEKG-------------------SYRN---- 947
                                           .|.|..|                   :.||    
Zfish  1683 PTTVREMATSPPTLPLSIHEPVRCICSMQGTGFSCPSGVGGRPPLMKVVTGDILVDITGRNVSEY 1747

  Fly   948 ------NLR------------KKNELRSFG----------AVESDGDEHLN--GYISQDMFHSAP 982
                  .||            :|:...|||          ||........|  ||      ||.|
Zfish  1748 LLYTSDRLRLHRYGGFTVGNIQKSVPASFGRKTPPMVRKIAVRRSSQVLYNNKGY------HSMP 1806

  Fly   983 MMLNLLQNVILRLSYPMQ----TDLVVLVENHPLPTQLSQKINVLDNKIAHIHVPLVVGCIIPLT 1043
            ..||:|.|.|||.:.|..    :...:.|.|||: .:.|..:: ||..:....|.:.:..|:.::
Zfish  1807 TYLNVLNNAILRANLPSSKGNPSAYGITVTNHPM-NRTSASLS-LDYLLQGTDVVIAIFIIVAMS 1869

  Fly  1044 V--SVFVIPLVEEEIYDVRFLQHMAGLGLKVFWGINLFWDWFTFFVYSVIIVVIMSLMGIGGFGF 1106
            .  :.||:.||.|:....:.||.::|.....:|..|..||...:.|.:...|:|:.:..:..:..
Zfish  1870 FVPASFVVFLVAEKSTKAKHLQFVSGCDPVTYWLANYIWDMLNYLVPATCCVLILFVFDLPAYTS 1934

  Fly  1107 YENAIMVV-LLTTFGLAALPLTYLVSM-FVNKSIVRAFLVSV-LLQGVSGLV----LYIIYWD-- 1162
            ..|...|: |...:|.:..|:.|..|. |...|....||:.: |..|::..|    |.:...|  
Zfish  1935 PTNFPAVLSLFLLYGWSITPIMYPASFWFEVPSTAYVFLIVINLFIGITATVATFLLQLFERDKD 1999

  Fly  1163 --VANSNTIFFYAAC--MSPGFSLLDGVSNVYAQNLEQAICIDKCEATDSCTEENMNEVVPNC-K 1222
              :.||    :..:|  :.|.::|..|:       :|.|.            .|.:||..... :
Zfish  2000 LKLVNS----YLKSCFLIFPNYNLGHGL-------MEMAY------------NEYINEYYAKIGQ 2041

  Fly  1223 FDTF---FKWAAPGILPPILYMVLSALI-FLMLIFWIELHRREKKFHTSRDLRKMRTATYPF--D 1281
            ||..   |:|..  :...::.|.:...: ||:.|..        :::..|..:::...:.|.  |
Zfish  2042 FDKVKSPFEWDI--VTRGLVAMTIEGFVGFLITILC--------QYNFLRKAQRVPVNSQPVEDD 2096

  Fly  1282 DGDVADVKQKI--AEADNTKAKQSVFLVDQV----EARVPAAGKRIHTVSFALNKYMSMGIFGPR 1340
            |.|||..::::  .:|||...|     :|.:    ::|.......:..:...:......|:.|..
Zfish  2097 DVDVACERRRVLRGDADNDMLK-----IDNLTKVYKSRKMGRILAVDRLCLGVRPGECFGLLGVN 2156

  Fly  1341 NSGKSHLMRQLVGQRGFAFGEIYVRGLDFKYDLESIHTYMGYSPQHRGLLNELTPREHIRLLCMI 1405
            .:||:...:.|.|......||.:::......:|..:...:||.||...|.::||.|||:.|...:
Zfish  2157 GAGKTTTFKMLTGDESTTGGEAFIQEHSILRELLRVQQSIGYCPQFDALFDDLTAREHLELYTRL 2221

  Fly  1406 RGVPEAKIGEKMHDLCL-MLNMTGWMHRKCSLLTAEKRHKLKIALALVAYNKILVLDEPTCGMPA 1469
            ||:| .|..|::....| .|.::.:..:.....:...:.||..|:||:.|..::.|||||.||..
Zfish  2222 RGIP-WKDEERVVQWALEKLELSKYADKPAGTYSGGNKRKLSTAIALIGYPSLIFLDEPTTGMDP 2285

  Fly  1470 TTRREIWNILRYIRYCGKTIIFATNDELECKILADFIILFQDSEMLAIGSLQYLRYKYSHGFYLE 1534
            ..||.:||::..|...|::::..::...||:.|...:.:..:.....:||:|:|:.::..|:.:.
Zfish  2286 KARRFLWNLILDIIKTGRSVVLTSHSMEECEALCTRLGIMVNGRFKCLGSIQHLKNRFGDGYMIT 2350

  Fly  1535 VRLIRDGATLAESEENLRKDVENLAKFVNFLHNRSELVGRLNNWFKFYVPVGHIVYSFLYGAMEK 1599
            ||.    .|.|..:|.:|        |.|.....:.|..|.:...::.:...:|..:.::..||:
Zfish  2351 VRT----KTTASVKEVIR--------FFNRNFPEAILKERHHTKIQYQLKSENISLAQVFSKMEQ 2403

  Fly  1600 NKLRLNVSDYCIYQADMMSVVAQVQETRAQLKHHLVQTEGPLPLDTTSPKKG 1651
            ....|::.||.:.|..:.:|.....:.::.   :|.|.|       :||..|
Zfish  2404 VVEVLSIEDYSVSQTTLDNVFVNFAKKQSD---NLEQQE-------SSPSSG 2445

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
CG1801NP_728408.3 ABC2_membrane_3 <246..379 CDD:463674 23/158 (15%)
rim_protein <514..1537 CDD:130324 270/1354 (20%)
abca2XP_005165287.2 None

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