Protein Alignment Abca3 and yphE

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: NP_417042.1
• Gene: yphE / 948990
• ECOCYCID: G7341
• Length: 503
• Species: Escherichia coli
• Alignment Length: 306
• Identity: 74/306 - (24%)
• Similarity: 138/306 - (45%)
• Gaps: 49/306 - (16%)

  Fly  1303 MAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDDDVANERER------------ 1355
            |:..||.    :|.:..|     |.:||: |:.......:||:..||..|...
E. coli   195 MSALGVA----VIYVSHR-----MEEIRR-IASCATVMRDGQVAGDVMLENTSTHHIVSLMLGRD 249

  Fly  1356 ---ILQMSSNELATKNLVLDRVTKYYGQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGD 1417
               |..::..|:..:.::..|..::..:   :..:|..::..|..|:.|:.|||::...|.:.|.
E. coli   250 HVDIAPVAPQEIVDQAVLEVRALRHKPK---LEDISFTLRRGEVLGIAGLLGAGRSELLKAIVGL 311

  Fly  1418 ERISSGAAYVQG--LSLESNMNSIYKMIGYCPQFDAL--------LDD---LTGREVLRIFCMLR 1469
            |....|...:.|  ::.....:.:.:.|||.|:....        :|:   ||.|:.:    ...
E. coli   312 EEYEQGEIVINGEKITRPDYGDMLKRGIGYTPENRKEAGIIPWLGVDENTVLTNRQKI----SAN 372

  Fly  1470 GV-QESRIRQLSEDLAKSFGFMKHIDKQT--HAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMD 1531
            || |.|.||:|:|::.:.. .:|....:|  ...||||::|:.....|..:..::.|||||.|:|
E. coli   373 GVLQWSTIRRLTEEVMQRM-TVKAASSETPIGTLSGGNQQKVVIGRWVYAASQILLLDEPTRGVD 436

  Fly  1532 PAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEF 1577
            ..|::|::.:|..:...|||:|..|..:||...:|.|:.::.:|.|
E. coli   437 IEAKQQIYRIVRELAAEGKSVVFISSEVEELPLVCDRILLLQHGTF 482

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	74/306 (24%)
yphE	NP_417042.1	MglA	18..503	CDD:440745	74/306 (24%)