Protein Alignment Abca3 and rbsA

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: NP_418205.1
• Gene: rbsA / 948264
• ECOCYCID: EG10814
• Length: 501
• Species: Escherichia coli
• Alignment Length: 440
• Identity: 99/440 - (22%)
• Similarity: 193/440 - (43%)
• Gaps: 85/440 - (19%)

  Fly   538 LQMRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIR 602
            ||::.:.|.|.....:.|.::|::...:..|:|.|||||:|.:.:|||::...:||.:..|.:
E. coli     5 LQLKGIDKAFPGVKALSGAALNVYPGRVMALVGENGAGKSTMMKVLTGIYTRDAGTLLWLGKE-- 67

  Fly   603 TNIEGARMS----LGICPQHNVLFDEMSVSNHI----RFFSRMKGLRGKAVEQEVAKYLKMIELE 659
            |...|.:.|    :||..|...|..:::::.:|    .|.:|...:..|.:..|..|.|..:.|.
E. coli    68 TTFTGPKSSQEAGIGIIHQELNLIPQLTIAENIFLGREFVNRFGKIDWKTMYAEADKLLAKLNLR 132

  Fly   660 DKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEK-VGRTLLLT 723
            .|::.....||.|.::.:.:...|..::||::.|||:..:..:....|:.::::.| .||.::..
E. coli   133 FKSDKLVGDLSIGDQQMVEIAKVLSFESKVIIMDEPTDALTDTETESLFRVIRELKSQGRGIVYI 197

  Fly   724 THFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGS-----------GYRL------------- 764
            :|.|.|...:.|.:.:..||:       |..:::..|           |.:|
E. coli   198 SHRMKEIFEICDDVTVFRDGQ-------FIAEREVASLTEDSLIEMMVGRKLEDQYPHLDKAPGD 255

  Fly   765 ICVKRDD-C--ETNEVTALLNK----YIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSD 822
            |.:|.|: |  ..|:|:..|.|    .:.||     :||        ..:...:.::|.|...|.
E. coli   256 IRLKVDNLCGPGVNDVSFTLRKGEILGVSGL-----MGA--------GRTELMKVLYGALPRTSG 307

  Fly   823 ELHLNGYGVGITSMEE------VFMKVGAEKDNT---GNIKDQHEI------MNGGSGFRGEDDN 872
            .:.|:|:.|...|.::      |::....::|..   .::|:...:      ...|...:..|:.
E. coli   308 YVTLDGHEVVTRSPQDGLANGIVYISEDRKRDGLVLGMSVKENMSLTALRYFSRAGGSLKHADEQ 372

  Fly   873 ESVQSDGIFSENRR---LLQGLQLLS--NQWKAMLLKKFLYTWRNKLLLL 917
            ::| ||.|...|.:   :.|.:.|||  ||.|..:.:..:  .|.|:|:|
E. coli   373 QAV-SDFIRLFNVKTPSMEQAIGLLSGGNQQKVAIARGLM--TRPKVLIL 419

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	99/440 (23%)
rbsA	NP_418205.1	PRK10762	1..501	CDD:236755	99/440 (23%)