Protein Alignment Abca3 and lsrA

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: NP_416030.1
• Gene: lsrA / 945680
• ECOCYCID: G6800
• Length: 511
• Species: Escherichia coli
• Alignment Length: 375
• Identity: 83/375 - (22%)
• Similarity: 161/375 - (42%)
• Gaps: 67/375 - (17%)

  Fly   541 RHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSD-IR-T 603
            |.:.|::....|:||:...:.:.|:..|||.|||||:|.:.::.|:.|..|||..|.|:: :| |
E. coli    15 RSVYKQYSGVNVLKGIDFTLHQGEVHALLGGNGAGKSTLMKIIAGITPADSGTLEIEGNNYVRLT 79

  Fly   604 NIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVE-QEVAKYLKMIELEDKANVASS 667
            .:...::.:.:.||..:||..:|:..:|.|     ||..|.:. |::...|..:..:...:..:.
E. coli    80 PVHAHQLGIYLVPQEPLLFPSLSIKENILF-----GLAKKQLSMQKMKNLLAALGCQFDLHSLAG 139

  Fly   668 KLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQ-EKVGRTLLLTTHFMDEAD 731
            .|....::.:.:...|..|:::::.|||::.:.|:...:|:..||: ...|..::..:|.:.|..
E. coli   140 SLDVADRQMVEILRGLMRDSRILILDEPTASLTPAETERLFSRLQELLATGVGIVFISHKLPEIR 204

  Fly   732 VLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYI----------- 785
            .:.|||::|.||.:...|                  |..:..|:::...:...:
E. coli   205 QIADRISVMRDGTIALSG------------------KTSELSTDDIIQAITPAVREKSLSASQKL 251

  Fly   786 ----PGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLN-GYGVGITSMEEVFMKVGA 845
                ||.:|:...|..:         ...|.:.|: ..::..|.|| |..:|:..:      |||
E. coli   252 WLELPGNRPQHAAGTPV---------LTLENLTGE-GFRNVSLTLNAGEILGLAGL------VGA 300

  Fly   846 EKDNTGNIKDQHEIMNGGS-GFRGEDDNESVQSDGIFSENRRLLQGLQLL 894
            .:............:.||. ...|::.|:       .|...|||:||..|
E. coli   301 GRTELAETLYGLRTLRGGRIMLNGKEINK-------LSTGERLLRGLVYL 343

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	83/375 (22%)
lsrA	NP_416030.1	PRK15439	1..511	CDD:185336	83/375 (22%)