DRSC/TRiP Functional Genomics Resources

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Protein Alignment ABCA and PDR15

DIOPT Version :9

Sequence 1:NP_608445.2 Gene:ABCA / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_010694.1 Gene:PDR15 / 852015 SGDID:S000002814 Length:1529 Species:Saccharomyces cerevisiae


Alignment Length:1167 Identity:223/1167 - (19%)
Similarity:381/1167 - (32%) Gaps:399/1167 - (34%)


- Green bases have known domain annotations that are detailed below.


  Fly   537 GLQMRHLKKRFGNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLT----GMFPPTSGTAIIN 597
            ||::....|......::|.:...:...|:.|:||..|:|.||.:..::    |...........|
Yeast   170 GLRLLKPSKEEDTFQILKPMDGCLNPGELLVVLGRPGSGCTTLLKSISSNSHGFKIAKDSIVSYN 234

  Fly   598 G---SDIRTNIEG------------------------ARMSLGICPQHNVL-FDEMSVSNHIRFF 634
            |   ||||.:..|                        |||.   .||:.:. .|..:.:||:   
Yeast   235 GLSSSDIRKHYRGEVVYNAESDIHLPHLTVYQTLFTVARMK---TPQNRIKGVDREAYANHV--- 293

  Fly   635 SRMKGLRGKAVEQEVAKY-LKMIELEDKANVASSKLSGGMKRKLSVC-CALCGDTKVVLCDEPSS 697
                      .|..:|.| |.........|.....:|||.::::|:. .|:||            
Yeast   294 ----------TEVAMATYGLSHTRDTKVGNDLVRGVSGGERKRVSIAEVAICG------------ 336

  Fly   698 GMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGY 762
                 ||.|.||            ..|..:|.|                                
Yeast   337 -----ARFQCWD------------NATRGLDSA-------------------------------- 352

  Fly   763 RLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELS----YQLPDSASAKFEEMFGQLEEQSDE 823
                           |||  ::|..||.:.|||...:    ||....|                 
Yeast   353 ---------------TAL--EFIRALKTQADIGKTAATVAIYQCSQDA----------------- 383

  Fly   824 LHLNGYGVGITSMEEVFMKVGAEKDNTGNIKDQHEIMNGGSGFRGEDDNESVQSDGIFSENRRLL 888
                         .::|.||..       :.|.:::..|.:    :|..:..|..|.:...|   
Yeast   384 -------------YDLFDKVCV-------LDDGYQLYFGPA----KDAKKYFQDMGYYCPPR--- 421

  Fly   889 QGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQY 953
                                                            |.|...|..|| |.|: 
Yeast   422 ------------------------------------------------QTTADFLTSIT-SPTE- 436

  Fly   954 PLAVTVLDRSNVQNGTGYEIANKYEDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSRYL 1018
                .::.:..::.||  .:....:|:|     .|.|:   ::.:::.|.|:..|::...:.   
Yeast   437 ----RIISKEFIEKGT--RVPQTPKDMA-----EYWLQ---SESYKNLIKDIDSTLEKNTDE--- 484

  Fly  1019 VAATITESKITAWLNNQALHTAPLTVN--------MVHNAIADKLFGSSVKIQVT-NAPLPYTTS 1074
             |..|......|....:|..::|..||        ::.|....|...|....||. |:.:.:...
Yeast   485 -ARNIIRDAHHAKQAKRAPPSSPYVVNYGMQVKYLLIRNFWRMKQSASVTLWQVIGNSVMAFILG 548

  Fly  1075 TLLSQLSTGNNLGT----------QLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVW 1129
            ::..::...|:..|          .:..|...|:..:.|:|....|.|:..              
Yeast   549 SMFYKVMKKNDTSTFYFRGAAMFFAILFNAFSCLLEIFSLYETRPITEKHR-------------- 599

  Fly  1130 TFWLSQFICD-FASYIVTALIVVITIVCF-----------QETGLSTFGELGRYYLLLLLFGFAV 1182
            |:.|.....| |||.:......:||.|||           :..|:..|     |:|:.::..|. 
Yeast   600 TYSLYHPSADAFASVLSEMPPKLITAVCFNIIFYFLVDFRRNGGVFFF-----YFLINVIATFT- 658

  Fly  1183 LPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELFDTKDTADILG---WIFRIFPH 1244
                  :|..||  ..|....::.......::.::.:.|.:.....|  ..|||   ||:.|.|.
Yeast   659 ------LSHLFR--CVGSLTKTLQEAMVPASMLLLAISMYTGFAIPK--TKILGWSIWIWYINPL 713

  Fly  1245 FSLAMSL------------------NKVYTN-TATRNACAKAGALPP---ILLCELVPQCCNLKP 1287
            ..|..||                  ...|.| |.|:..|:..||.|.   :|..:.:.:..:.:.
Yeast   714 AYLFESLMINEFHDRRFPCAQYIPAGPAYQNITGTQRVCSAVGAYPGNDYVLGDDFLKESYDYEH 778

  Fly  1288 YFAWEEPGVLPETVYMAVTGVVFFLIIIVLEF--------RLINELMFKIRQLISKPPPPPTEGQ 1344
            ...|...|     :.||.....||:.:|:.|:        .::..|..||:||       ..||:
Yeast   779 KHKWRGFG-----IGMAYVVFFFFVYLILCEYNEGAKQKGEMVVFLRSKIKQL-------KKEGK 831

  Fly  1345 LDD---------------DVANERERILQMSS--NELATKN--LVLDRVTKYY------------ 1378
            |.:               |.|...::||..||  ::.::.|  |.|.:....:            
Yeast   832 LQEKHRPGDIENNAGSSPDSATTEKKILDDSSEGSDSSSDNAGLGLSKSEAIFHWRDLCYDVPIK 896

  Fly  1379 -GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERIS----SGAAYVQGLSLESNMNS 1438
             ||...:|.|...|:......|:|.:||||||....:.  ||::    :|..:|.|...:   .|
Yeast   897 GGQRRILNNVDGWVKPGTLTALMGASGAGKTTLLDCLA--ERVTMGVITGNIFVDGRLRD---ES 956

  Fly  1439 IYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLS---EDLAKSFGFMKHIDKQTHAY 1500
            ..:.||||.|.|..|...|.||.||....||......|.:.:   |::.|.....::.|......
Yeast   957 FPRSIGYCQQQDLHLKTATVRESLRFSAYLRQPSSVSIEEKNRYVEEVIKILEMQQYSDAVVGVA 1021

  Fly  1501 SGG----NKRKLSTAIAVIGSPS-VIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSH 1557
            ..|    .:::|:..:.:...|. :::|||||:|:|.........::.::...|::|:.|.|
Yeast  1022 GEGLNVEQRKRLTIGVELAARPKLLVFLDEPTSGLDSQTAWDTCQLMRKLATHGQAILCTIH 1083

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
ABCANP_608445.2 ABC2_membrane_4 254..434 CDD:289500
ABC2_membrane_3 <269..475 CDD:289468
CcmA 538..843 CDD:224054 60/342 (18%)
ABC_subfamily_A 538..755 CDD:213230 47/250 (19%)
ABC2_membrane_3 913..1316 CDD:289468 84/458 (18%)
ABC_subfamily_A 1369..1587 CDD:213230 53/214 (25%)
drrA 1376..1702 CDD:130256 51/207 (25%)
PDR15NP_010694.1 ABC_trans_N 47..162 CDD:405234
3a01205 110..1518 CDD:273362 223/1167 (19%)
Blue background indicates that the domain is not in the aligned region.


Information from Original Tools:


Tool Simple Score Weighted Score Original Tool Information
BLAST Result Score Score Type Cluster ID
Compara 00.000 Not matched by this tool.
Domainoid 00.000 Not matched by this tool.
eggNOG 00.000 Not matched by this tool.
Hieranoid 00.000 Not matched by this tool.
Homologene 00.000 Not matched by this tool.
Inparanoid 1 1.050 105 1.000 Inparanoid score I1418
Isobase 00.000 Not matched by this tool.
OMA 00.000 Not matched by this tool.
OrthoFinder 00.000 Not matched by this tool.
OrthoInspector 00.000 Not matched by this tool.
orthoMCL 00.000 Not matched by this tool.
Panther 00.000 Not matched by this tool.
Phylome 00.000 Not matched by this tool.
RoundUp 00.000 Not matched by this tool.
SonicParanoid 00.000 Not matched by this tool.
TreeFam 00.000 Not matched by this tool.
11.050

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