Protein Alignment Abca3 and CAF16

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: NP_116625.1
• Gene: CAF16 / 850516
• SGDID: S000001866
• Length: 289
• Species: Saccharomyces cerevisiae
• Alignment Length: 255
• Identity: 59/255 - (23%)
• Similarity: 100/255 - (39%)
• Gaps: 61/255 - (23%)

  Fly  1399 LLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLES--NMNSIYKMIGYCPQFDALLDDLTGREV 1461
            ::|.|||||:|..|:::|......|...|.||...|  :||.:        ..|..::|.|..:.
Yeast    39 VVGANGAGKSTLLKLLSGKHLCLDGKILVNGLDPFSPLSMNQV--------DDDESVEDSTNYQT 95

  Fly  1462 LRIFCMLRGVQESRIRQLSED-----LAKSFGF------------MKHIDK--QTHAYSGGNKRK 1507
            ....    |.:...:..::.|     |.||.||            :..||.  :.|..|.|.||:
Yeast    96 TTYL----GTEWCHMSIINRDIGVLELLKSIGFDHFRERGERLVRILDIDVRWRMHRLSDGQKRR 156

  Fly  1508 LSTAIAVIGSPSVIYLDEPTTGMDPAARRQL-----WNMVCRIRDSGKSIVLTSHSMEECEALCT 1567
            :..|:.::....|:.|||.|..:|..||.:|     |....|    ..|:|..:|
Yeast   157 VQLAMGLLKPWRVLLLDEVTVDLDVIARARLLEFLKWETETR----RCSVVYATH---------- 207

  Fly  1568 RLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLE--ALRQARLSGGYARNPDEQTV 1625
                :.:|..|......|:|   |..::..:..::::|  .:..|:::|..|...|...|
Yeast   208 ----IFDGLAKWPNQVYHMK---SGKIVDNLDYQKDVEFSEVVNAKVNGQVAFENDNNKV 260

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	59/255 (23%)
CAF16	NP_116625.1	ABC_ATPase	8..226	CDD:213179	53/219 (24%)