Protein Alignment Abca3 and ABCA6

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: NP_001327229.1
• Gene: ABCA6 / 823931
• AraportID: AT3G47770
• Length: 926
• Species: Arabidopsis thaliana
• Alignment Length: 975
• Identity: 242/975 - (24%)
• Similarity: 407/975 - (41%)
• Gaps: 213/975 - (21%)

  Fly    13 LLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDT-------EQKGVRYYNEQNLTDLNL- 69
            |..||.|.|..:.|..|..:|:|....::||.::.:.|:       .|.|.|..::....|...
plant    16 LFKKNLTYQKRNIWSNVRLIVIPLYLCVVLVCIQAVFDSLVNNSVDNQCGCRCADDDKNGDGKCE 80

  Fly    70 -----LQHSLHRSSYL------GKLIAL--IAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEA 121
                 ||:|....:..      ..|:.|  |.|:..|.:          |....:..:..||...
plant    81 IKSCGLQYSSQNQAVFCAFPNPPPLLPLLHIPPSVNRDS----------CQRTGSCPVTILVTGN 135

  Fly   122 WQSLG----KNKICES-----------ENATQLELDTVSKNAFAGVQFDDAWANLTENDPL---- 167
            .||||    :|.:..|           .|.....|.|.|:..:...:....:::|    |:
plant   136 NQSLGTTLSENLLSTSFTVNSSSDLFLRNLAYNVLSTTSETDYTNYRDPGIYSDL----PIFNIQ 196

  Fly   168 ----------------PNDFHFALRFPAELRTATIAIANTWLTMRLFPTIDLTGPRNEGDDDGGI 216
                            |.:||..:|....|        |.|....|           |.:|:  |
plant   197 PQCTPATILSLSFRQPPLEFHKEVRCVQGL--------NLWRNNSL-----------EVNDE--I 240

  Fly   217 PPGYLREGFLPLQHSLSMA-----------------YLRQKSGEQD-------LP---NVVMKRY 254
            ..|:.:|....:.:.::.|                 |...|...||       :|   |:|...|
plant   241 FKGFRKENHEEIINEVAAAYDLLNTDRNKFNVTIWYYTTYKGDLQDWRVKYVRVPRSVNMVSNAY 305

  Fly   255 ------PFPAYIFDPLLE----------GMSSIM-----SLIILLSFIYPCTYITKYITAEKEKQ 298
                  |....:||.:.|          .|:|::     :.:|||.|    ..|...:..||:::
plant   306 LQFLRGPGTKILFDFVKEMPKQETRLRMDMASLIGPIFFTWVILLLF----PVILTSLVYEKQQR 366

  Fly   299 LKEVMKIMGLSNWLHWT---AWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLI 360
            |:.:||:.||.:..:|.   |:|      |.||.:.|..|:....:..:......::|....|..
plant   367 LRIIMKMHGLGDAPYWMISYAYF------LAISTLYIVCLMIFGSAIGLKFFRFNDYTIQFMFYF 425

  Fly   361 IYIVSSICFCFMMATFFSRASTAAAVTGLIWF----IAYIPYSFTINSYDDLSLSSKLGWSLISN 421
            :||...|...|::::.||:|.||:.|..:..|    :....:.|.|.     |||....|..:..
plant   426 LYINLQISIAFLVSSAFSKAVTASVVAYIYVFGSGLLGAFLFQFLIE-----SLSFPRRWIFVME 485

  Fly   422 TAMGFGIKLILGFEGTGE--------------GLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIY 472
            ...||.:     :.|..|              |::|.: |...::|:..|:      ::|..|:.
plant   486 LYPGFSL-----YRGLYEFSQYAFQRNLNGRDGMKWKD-FRGSAMDEVFTI------IIVEWVVA 538

  Fly   473 MIICLYVEQVMPGSFGV-----------PRPWNFPFTREFWCGEREYTGVEDIPNGHVEQRDPKA 526
            ::...|:::|...|...           |.|....|.:     ||....||......:::::...
plant   539 LVATYYIDRVSSSSKDTFAFLKNPFKLSPTPQMLSFQK-----ERSDVSVEMEKLDVIQEKETVK 598

  Fly   527 FETEPEGKHIGLQMRHLKK----RFGN--KMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTG 585
            .......|:.|:...:|||    |.||  |:.|.|||:.:...|...:||.||||||:.|:|:||
plant   599 QLIFERSKNHGIVCDNLKKVYQGRDGNPPKLAVCGLSLAVPSGECFGMLGPNGAGKTSFINMMTG 663

  Fly   586 MFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVA 650
            :..|:||:|.:.|.||..:::...:|:|:||||::|::.::...|:.|:.|:|.|:|..:.|.|.
plant   664 LVKPSSGSAFVQGLDICKDMDKVYISMGVCPQHDLLWETLTGKEHLLFYGRLKNLKGHDLNQAVE 728

  Fly   651 KYLKMIEL--EDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQ 713
            :.||.:.|  ...|::.:.|.||||||:|||..:|.|..|||..||||:|:||::|..||.::::
plant   729 ESLKSVNLFHGGVADIPAGKYSGGMKRRLSVAISLIGSPKVVYMDEPSTGLDPASRINLWTVIKR 793

  Fly   714 EKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVT 778
            .|....::||||.|:||:.|.||:.|..||.|:|.|....||.:||..|.|......:.| .:|.
plant   794 AKKHAAIILTTHSMEEAEFLCDRLGIFVDGRLQCIGNPKELKGRYGGSYVLTITTSPEHE-KDVE 857

  Fly   779 ALLNKYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKV 843
            .|:.:.....:....|.....::.| ....:..|:|..:|.......:..:|...|::|:||:||
plant   858 TLVQEVSSNARKIYHIAGTQKFEFP-KEEVRISEVFQAVENAKRNFTVFAWGFADTTLEDVFIKV 921

  Fly   844  843
            plant   922  921

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	208/815 (26%)
ABCA6	NP_001327229.1	rim_protein	<341..>923	CDD:130324	175/615 (28%)
		ABC_subfamily_A	614..835	CDD:213230	92/220 (42%)