Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_671751.2 | Gene: | Abca6 / 76184 | MGIID: | 1923434 | Length: | 1624 | Species: | Mus musculus |
Alignment Length: | 1843 | Identity: | 435/1843 - (23%) |
---|---|---|---|
Similarity: | 798/1843 - (43%) | Gaps: | 398/1843 - (21%) |
- Green bases have known domain annotations that are detailed below.
Fly 13 LLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNLTDLNLLQHSLHRS 77
Fly 78 SYLGKLIAL--IAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAWQSLGKNKICESENATQL- 139
Fly 140 ------ELDTVSKNAF---AGVQFDDAWA------NLTENDPLPNDFHFALRFPAELRTATIAIA 189
Fly 190 NTWLT-MRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGE------QDLP 247
Fly 248 NVVMKRYPF-PAYIFDPLLEGMSSIMSLIILL---SFIYPCTYITKYITAEKEKQLKEVMKIMGL 308
Fly 309 SNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMM 373
Fly 374 ATFFSRASTAAAVTGLI-------WFIAYIPYSFTINSYDDLSLSSKLGW--SLISNTAMGFGIK 429
Fly 430 LILGFEGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVP-RPW 493
Fly 494 NFPFTREFWCG----------EREYTGVEDIPNG-HVEQRDPKAFETEPEGKHIGLQMRHLKKRF 547
Fly 548 ----GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAII---NGSDIRTNI 605
Fly 606 EGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLS 670
Fly 671 GGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGD 735
Fly 736 RIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTALLNKYIPGLKPECDIGAELSY 800
Fly 801 QLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKDQHEIMNGGSG 865
Fly 866 FRGEDDNESVQSDGI----FSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNK------LLLLIQN 920
Fly 921 IMP--VFFVVVTILIIKTQGTFQE----LKPITISLTQYP--LAVTVLDRSNVQNGTGYEIANKY 977
Fly 978 EDLARSY-GSNYGLELTGTQGFEDYILDLGKTIQVRINSRYLVAATITESKITAWLNNQALHTAP 1041
Fly 1042 LTVNMVHNAIADKLFGSS---VKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSS 1103
Fly 1104 I---YILFLIKERESRAKLLQFVGGVKVWTFWLSQFICD------------FASYIVTAL----- 1148
Fly 1149 ------IVVITIVCFQETGLSTFGELGRYYLLLLLFG-------FAVLPFIYIMSLFFREPATG- 1199
Fly 1200 ------FARVSIVNIFCGMALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNT 1258
Fly 1259 ATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFR--- 1320
Fly 1321 --LINELMFKIRQLISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRV-------TK 1376
Fly 1377 YYGQ----------FMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGL- 1430
Fly 1431 SLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGV-QESRIRQLSEDLAKSFGFMKHID 1494
Fly 1495 KQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMV-CRIRDSGKSIVLTSHS 1558
Fly 1559 MEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQ 1623
Fly 1624 TVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGV-KWSRIFGLMESNRDQLNVED 1687
Fly 1688 YSVSQTTLEEIFLEFAKYQREDT 1710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 54/192 (28%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 55/217 (25%) | ||
CcmA | 538..843 | CDD:224054 | 109/311 (35%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 83/223 (37%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 76/460 (17%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 76/237 (32%) | ||
drrA | 1376..1702 | CDD:130256 | 102/339 (30%) | ||
Abca6 | NP_671751.2 | rim_protein | <169..1600 | CDD:130324 | 398/1612 (25%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838447 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 1 | 1.000 | - | - | ||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
7 | 6.650 |