Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_780419.2 | Gene: | Abca12 / 74591 | MGIID: | 2676312 | Length: | 2595 | Species: | Mus musculus |
Alignment Length: | 1734 | Identity: | 524/1734 - (30%) |
---|---|---|---|
Similarity: | 854/1734 - (49%) | Gaps: | 254/1734 - (14%) |
- Green bases have known domain annotations that are detailed below.
Fly 140 ELDTVSKNAFAGVQ-FDDAWANLTEN-------DP----LPNDFHFALRFPAELRTATIAIANTW 192
Fly 193 LTMRLFPT-IDLTGPRNEGDDDGGIPPGYLR---EGFLPLQHSLSMAYLRQKSG--EQDLPNVVM 251
Fly 252 KRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTA 316
Fly 317 WFVKS--FIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSR 379
Fly 380 ASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWS 444
Fly 445 NFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFW-----CG 504
Fly 505 EREYTGVEDI--PNGHVEQRDPKAFET----------EPEGK--HIGLQMRHLKKRFGNKMVVKG 555
Fly 556 LSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNV 620
Fly 621 LFDEMSVSNHIRFFSRMK--GLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCAL 683
Fly 684 CGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQ 748
Fly 749 GTSFFLKKQYGSGYRLICVKRDD--------CETNEVTALLNKYIPGLKPECDIGAELSYQLP-- 803
Fly 804 -DSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKDQH----EIMNGG 863
Fly 864 SGFRGEDDNESVQS-------DGIFSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNI 921
Fly 922 MPVFFVVVT---------------ILIIKT-QGT------FQELKPITISLT----QYP-LAVTV 959
Fly 960 LDRSNVQ----------NGTGYEI-----------------ANKYEDLARSYGSNYGLELTGTQG 997
Fly 998 FEDYILDLGKTIQVRINSRY----------------LVAATITESKITAWLNNQALHTAPLTVNM 1046
Fly 1047 VHNAI----ADKLFGSSVKIQVTNAPLP-------YTTSTLLSQLSTGNNLGTQLASNLCFCMCF 1100
Fly 1101 VSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTF 1165
Fly 1166 GELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELFDTKD 1230
Fly 1231 ---------TADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLCELVPQCCNLK 1286
Fly 1287 PYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDDDVAN 1351
Fly 1352 ERERILQMSSNELATKNLV-LDRVTKYY----GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTF 1411
Fly 1412 KMMTGDERISSGAAYVQGLSLE-SNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESR 1475
Fly 1476 IRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWN 1540
Fly 1541 MVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLE 1605
Fly 1606 ALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWS 1670
Fly 1671 RIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAK----YQREDT 1710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 53/181 (29%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 63/207 (30%) | ||
CcmA | 538..843 | CDD:224054 | 126/317 (40%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 95/218 (44%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 101/492 (21%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 112/223 (50%) | ||
drrA | 1376..1702 | CDD:130256 | 134/330 (41%) | ||
Abca12 | NP_780419.2 | ABC2_membrane_3 | <1006..1267 | CDD:289468 | 78/276 (28%) |
NosY | <1108..1269 | CDD:224196 | 54/167 (32%) | ||
ZnuC | 1346..1570 | CDD:224046 | 97/223 (43%) | ||
ABC_subfamily_A | 1350..1565 | CDD:213230 | 95/214 (44%) | ||
ABC2_membrane_3 | <1913..2174 | CDD:289468 | 60/272 (22%) | ||
CcmA | 2253..2567 | CDD:224054 | 140/340 (41%) | ||
ABC_subfamily_A | 2254..2477 | CDD:213230 | 111/222 (50%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C167838439 | |
Domainoid | 0 | 0.000 | Not matched by this tool. | |||
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
Isobase | 0 | 0.000 | Not matched by this tool. | |||
OMA | 0 | 0.000 | Not matched by this tool. | |||
OrthoDB | 0 | 0.000 | Not matched by this tool. | |||
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 1 | 1.100 | - | - | O | PTHR19229 |
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.740 |