Protein Alignment Abca3 and LOC5666864

DIOPT Version :10

• Sequence 1: NP_608445.2
• Gene: Abca3 / 33103
• FlyBaseID: FBgn0031170
• Length: 1714
• Species: Drosophila melanogaster
• Sequence 2: XP_001688862.2
• Gene: LOC5666864 / 5666864
• VectorBaseID: AGAMI1_011737
• Length: 1652
• Species: Anopheles gambiae
• Alignment Length: 233
• Identity: 50/233 - (21%)
• Similarity: 81/233 - (34%)
• Gaps: 76/233 - (32%)

  Fly   242 SNGALKVKAAYNKEYPLEMQVQGAKAQVYIATSPKELNNPRRTWDLDAIVSEIDAAKKFIDIHVM 306
            :||.|.|.||.....|              .::|.:.|:...|   .|:....:.|.. :|
Mosquito  1097 NNGGLLVTAATPGVAP--------------NSAPGDANHRNST---PAVAGNKENANP-VD---- 1139

  Fly   307 DYFPLFIYRNPR----------------VHFSNIDDAIRRAVVRGVKIRFLAAALHYPDIGTRF- 354
                 |:.|.||                .||....|...|...|...|..    .:.|::..:.
Mosquito  1140 -----FVIRRPRNCALLNTYKPTHKLANNHFHRYTDVKPREERRATVIDL----ANQPNVQGKIN 1195

  Fly   355 ------LRS-LESLNGFHANGTMEVKIFKVPRTNIESIV--INRERRTHNKF-MVTE-SAGIIGT 408
                  ||| :|.||        |.::|.:.|  :|:::  :.:::..|::. .||| ..|.|..
Mosquito  1196 GWKIYHLRSQMEDLN--------ESEVFSLGR--LETMLQDLEKDKEKHSEIERVTELLKGNIQR 1250

  Fly   409 SNWSGDYFMGGTTGAAIVIRQTGEKRPFVDELKDIFTR 446
            |....|    |...|...:.:..|.:|.|   .:|.||
Mosquito  1251 SKIITD----GINEAQNQLMKIFEHKPHV---SNIITR 1281

Known Domains

Gene	Sequence	Domain	Region	External ID	Identity
Abca3	NP_608445.2	rim_protein	<137..1708	CDD:130324	50/233 (21%)
LOC5666864	XP_001688862.2	None