Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001296394.1 | Gene: | abca1a / 558924 | ZFINID: | ZDB-GENE-031006-12 | Length: | 2268 | Species: | Danio rerio |
Alignment Length: | 1930 | Identity: | 624/1930 - (32%) |
---|---|---|---|
Similarity: | 967/1930 - (50%) | Gaps: | 368/1930 - (19%) |
- Green bases have known domain annotations that are detailed below.
Fly 31 ELVLPAIFSLL-----LVLVRTLVDTEQKGVRYYN------EQNLTDLNLLQHSLHRSSYLGKLI 84
Fly 85 ALIAPNRRRKNG-----------------GFSKFEFILCYSPVNPVL--KKLVEEAWQSLGKNKI 130
Fly 131 CESENATQLELDTVSKNAFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTATIAIANTWLTM 195
Fly 196 RLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMKRYPFPAYI 260
Fly 261 FDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFIML 325
Fly 326 TISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLI 390
Fly 391 WFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSVDDT 455
Fly 456 LTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTG-VEDIPNGHV 519
Fly 520 EQRDPKAFETEPEGKHIGLQMRHLKKRFGN-KMVVKGLSMNMFEDEITVLLGHNGAGKTTTISML 583
Fly 584 TGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQE 648
Fly 649 VAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQ 713
Fly 714 EKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRD------DC 772
Fly 773 ETNEVTA----------------------------------------LLNKYIPGLKPECDIGAE 797
Fly 798 LSYQLP-DSA-SAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNTGNIKD----- 855
Fly 856 ----QHEIMNGGSGFR-----------GEDDNESVQS---DGIFSENRRLLQGLQLLSNQWKAML 902
Fly 903 LKKFLYTWRNKLLLLIQNIMPVFFVVVTI---LIIKTQGTFQE--LKP----------------- 945
Fly 946 ------------------------------------------ITISLTQY--------------- 953
Fly 954 ----------------------PLAVTVLDRSNVQNGTGYEIANKYEDLARSYGS---------- 986
Fly 987 -----NYG---LELTGTQGFE--DYILDLGKTIQVRIN-------SRYL------VAATITESKI 1028
Fly 1029 TAWLNNQALHTAPLTVNMVHNAI-----ADKLFGSSVKIQVTNAPLPYTTSTL--LSQLSTGNNL 1086
Fly 1087 GTQLASNLC--FCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALI 1149
Fly 1150 VVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMAL 1214
Fly 1215 FIVVVVMSSELFDTKDTA---DILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLC 1276
Fly 1277 ELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPT 1341
Fly 1342 EGQLDDDVANERERILQMSSNELATKNLVLDRVTKYY--GQFMAVNQVSLCVQEVECFGLLGVNG 1404
Fly 1405 AGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLR 1469
Fly 1470 GVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAA 1534
Fly 1535 RRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIK 1599
Fly 1600 VRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPL 1664
Fly 1665 TGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 65/179 (36%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 73/205 (36%) | ||
CcmA | 538..843 | CDD:224054 | 148/353 (42%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 115/217 (53%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 124/548 (23%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 123/219 (56%) | ||
drrA | 1376..1702 | CDD:130256 | 156/327 (48%) | ||
abca1a | NP_001296394.1 | rim_protein | 1..2233 | CDD:130324 | 624/1927 (32%) |
ABC_subfamily_A | 904..1122 | CDD:213230 | 115/217 (53%) | ||
ABC_subfamily_A | 1919..2139 | CDD:213230 | 123/219 (56%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 168 | 1.000 | Domainoid score | I3783 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
6 | 5.830 |