Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | XP_021322694.1 | Gene: | abca4b / 555506 | ZFINID: | ZDB-GENE-050517-4 | Length: | 2327 | Species: | Danio rerio |
Alignment Length: | 2012 | Identity: | 618/2012 - (30%) |
---|---|---|---|
Similarity: | 954/2012 - (47%) | Gaps: | 421/2012 - (20%) |
- Green bases have known domain annotations that are detailed below.
Fly 22 WNHKWQMVIELVL-----PAIFSLLLVLVRTLVDTE--QKGVRYYNE---------QNLTDLNLL 70
Fly 71 QHSLHRSSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPV--------------LKKLVEEA 121
Fly 122 WQSLGKNKICES---------EN-ATQLELDTVSKNAF-AGVQFDDAWANLTENDPLPNDFHFAL 175
Fly 176 RFPAELRTATIAIANTWLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQK 240
Fly 241 SGEQDLP-NVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMK 304
Fly 305 IMGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICF 369
Fly 370 CFMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGF 434
Fly 435 EGTGEGLQWSNFFTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTR 499
Fly 500 EFWCG----------------EREYTGVEDIPNG-------------------HVEQRDPKA--- 526
Fly 527 --------------------------FETEPEGKHIGLQMRHLKKRFG--NKMVVKGLSMNMFED 563
Fly 564 EITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVS 628
Fly 629 NHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCD 693
Fly 694 EPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQY 758
Fly 759 GSGYRLICVKR--------DDCE-------------------------------TNEVTALLNKY 784
Fly 785 IPGLKPECDIGAELSYQLPDSA--SAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGA-- 845
Fly 846 EKDNTGNIKDQHEIM--NGGSGFR-----GEDDN---ESVQSDGIFSENR--RLLQGLQLLSNQW 898
Fly 899 KAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTI---LIIKTQGTFQ------------------- 941
Fly 942 -------------------------------------------ELKPIT---------------- 947
Fly 948 ----------ISLTQYPLAVT-----------------VLDRSNVQNGTGY-----------EIA 974
Fly 975 NKYEDLARSYGSNYGLELTG--------TQGFEDYILDLGKTIQVRINSRYLVAA---------- 1021
Fly 1022 TITESKITAWLNNQALHTAPLTVNMVHNAIADKLF-----GSSVKIQVTNAPLPYTTSTLLSQLS 1081
Fly 1082 TGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVT 1146
Fly 1147 ALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCG 1211
Fly 1212 MALFIVVVVMSSELFDTKDTA----DILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAG---A 1269
Fly 1270 LPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLIS 1334
Fly 1335 KPPPPPTEGQL-----DDDVANERERILQMSSNELATKN--LVLDRVTKYYGQFM--AVNQVSLC 1390
Fly 1391 VQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDD 1455
Fly 1456 LTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSV 1520
Fly 1521 IYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQH 1585
Fly 1586 LKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSIL 1650
Fly 1651 QEEYQGILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQ--REDT 1710 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 64/179 (36%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 74/205 (36%) | ||
CcmA | 538..843 | CDD:224054 | 142/347 (41%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 113/218 (52%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 111/551 (20%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 119/219 (54%) | ||
drrA | 1376..1702 | CDD:130256 | 153/327 (47%) | ||
abca4b | XP_021322694.1 | AAA | 1..2315 | CDD:333001 | 618/2012 (31%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 1 | 0.930 | - | - | C170582264 | |
Domainoid | 1 | 1.000 | 139 | 1.000 | Domainoid score | I4737 |
eggNOG | 1 | 0.900 | - | - | E2759_KOG0059 | |
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
orthoMCL | 1 | 0.900 | - | - | OOG6_100045 | |
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
ZFIN | 0 | 0.000 | Not matched by this tool. | |||
8 | 7.660 |