Sequence 1: | NP_608445.2 | Gene: | ABCA / 33103 | FlyBaseID: | FBgn0031170 | Length: | 1714 | Species: | Drosophila melanogaster |
---|---|---|---|---|---|---|---|---|---|
Sequence 2: | NP_001011033.1 | Gene: | abca4 / 496442 | XenbaseID: | XB-GENE-1000810 | Length: | 2359 | Species: | Xenopus tropicalis |
Alignment Length: | 1977 | Identity: | 602/1977 - (30%) |
---|---|---|---|
Similarity: | 937/1977 - (47%) | Gaps: | 451/1977 - (22%) |
- Green bases have known domain annotations that are detailed below.
Fly 50 DTEQKGVRYYNEQNLTDLNLLQHSLHR-SSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPV 113
Fly 114 LKKLVEEAWQSLGKNKICESENATQLELDTVSKNAF-AGVQFDD--AWANLTENDPLPNDFHFAL 175
Fly 176 RFPAELRTATIAIANTWLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQK 240
Fly 241 SGEQDLPNVVMKRYPFPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKI 305
Fly 306 MGLSNWLHWTAWFVKSFIMLTISAILIAILVKINWSEDVAVLTHANFTALVFFLIIYIVSSICFC 370
Fly 371 FMMATFFSRASTAAAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFE 435
Fly 436 GTGEGLQWSNF-FTPVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTR 499
Fly 500 EFWCG-EREYTGVED-----------IPNGHVEQRD--PKA------------------------ 526
Fly 527 -------------------------------------------FETEPEGKHIGLQMRHLKKRFG 548
Fly 549 N--KMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMS 611
Fly 612 LGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRK 676
Fly 677 LSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMC 741
Fly 742 DGELKCQGTSFFLKKQYGSGYRLICVKR----------------DDC------------------ 772
Fly 773 ----ETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKFE---EMFGQLEEQSDELHLNGYG 830
Fly 831 VGITSMEEVFMKVGAEK--------------------------------DNTGN----IKDQHEI 859
Fly 860 MNGGSGFRGEDDNESV---QSDGIFSENRRLLQGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNI 921
Fly 922 MPVFFVVVTI---LIIKTQGTFQEL---------------------------------------- 943
Fly 944 ----KP------------------ITISLTQYPL-----------AVTVLDRSN----------- 964
Fly 965 ---------------VQNGTGYEIAN----KYEDLARS-----YGSN---YG-------LELTGT 995
Fly 996 QGFE--DYILDLGKTIQVRINS---------RYLVAATITESKITAWLNNQALHTAPLTVNMVHN 1049
Fly 1050 AI------ADK---LFGSSVKIQVTNAPLPYTTSTLLSQLSTGNNLGTQLASNLCFCMCFVSSIY 1105
Fly 1106 ILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVITIVCFQETGLSTFGELGR 1170
Fly 1171 YYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCGMALFIVVVVMSSELFDTKDTA--- 1232
Fly 1233 -DILGWIFRIFPHFSLAMSLNKVYTNTATRNACAKAGALPPILLCELVPQCCNLKPYFAWEEPGV 1296
Fly 1297 LPETVY-MAVTGVVFFLIIIVLEFRLINELMFKIRQLISKPPPPPTEGQLDDDVANERERILQ-M 1359
Fly 1360 SSNELATKNLVLDRVTKYY--GQFMAVNQVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISS 1422
Fly 1423 GAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSF 1487
Fly 1488 GFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSI 1552
Fly 1553 VLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYA 1617
Fly 1618 RNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQGILTFYIPLTGVKWSRIFGLMESNRDQ 1682
Fly 1683 LNVEDYSVSQTTLEEIFLEFAKYQRED 1709 |
Gene | Sequence | Domain | Region | External ID | Identity |
---|---|---|---|---|---|
ABCA | NP_608445.2 | ABC2_membrane_4 | 254..434 | CDD:289500 | 56/179 (31%) |
ABC2_membrane_3 | <269..475 | CDD:289468 | 68/206 (33%) | ||
CcmA | 538..843 | CDD:224054 | 140/347 (40%) | ||
ABC_subfamily_A | 538..755 | CDD:213230 | 106/218 (49%) | ||
ABC2_membrane_3 | 913..1316 | CDD:289468 | 121/548 (22%) | ||
ABC_subfamily_A | 1369..1587 | CDD:213230 | 124/219 (57%) | ||
drrA | 1376..1702 | CDD:130256 | 159/327 (49%) | ||
abca4 | NP_001011033.1 | rim_protein | 1..2347 | CDD:130324 | 602/1977 (30%) |
ABC2_membrane | 604..>778 | CDD:304374 | 52/178 (29%) | ||
ABC_subfamily_A | 997..1216 | CDD:213230 | 106/218 (49%) | ||
ABC_subfamily_A | 2013..2233 | CDD:213230 | 124/219 (57%) |
Tool | Simple Score | Weighted Score | Original Tool Information | |||
---|---|---|---|---|---|---|
BLAST Result | Score | Score Type | Cluster ID | |||
Compara | 0 | 0.000 | Not matched by this tool. | |||
Domainoid | 1 | 1.000 | 160 | 1.000 | Domainoid score | I3998 |
eggNOG | 0 | 0.000 | Not matched by this tool. | |||
Hieranoid | 0 | 0.000 | Not matched by this tool. | |||
Homologene | 0 | 0.000 | Not matched by this tool. | |||
Inparanoid | 0 | 0.000 | Not matched by this tool. | |||
OMA | 1 | 1.010 | - | - | QHG53524 | |
OrthoDB | 1 | 1.010 | - | - | D131191at2759 | |
OrthoFinder | 1 | 1.000 | - | - | FOG0000051 | |
OrthoInspector | 0 | 0.000 | Not matched by this tool. | |||
Panther | 0 | 0.000 | Not matched by this tool. | |||
Phylome | 1 | 0.910 | - | - | ||
RoundUp | 0 | 0.000 | Not matched by this tool. | |||
SonicParanoid | 0 | 0.000 | Not matched by this tool. | |||
SwiftOrtho | 0 | 0.000 | Not matched by this tool. | |||
TreeFam | 0 | 0.000 | Not matched by this tool. | |||
5 | 4.930 |