DRSC/TRiP Functional Genomics Resources

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Protein Alignment Abca3 and LOC4577893

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:XP_061509472.1 Gene:LOC4577893 / 4577893 VectorBaseID:AGAMI1_014774 Length:1672 Species:Anopheles gambiae


Alignment Length:1742 Identity:803/1742 - (46%)
Similarity:1133/1742 - (65%) Gaps:117/1742 - (6%)


- Green bases have known domain annotations that are detailed below.


  Fly     5 TNWDKFVLLLWKNWTLQWNHKWQMVIELVLPAIFSLLLVLVRTLVDTEQKGVRYYNEQNL---TD 66
            ::||||:|||||||.:|..|..|.:.|:::|||..::|::||.|||.:     .|:|...   .:
Mosquito     4 SSWDKFILLLWKNWIIQKRHYVQTLFEILIPAIACVVLIVVRGLVDAD-----VYDEPTTWKPLE 63

  Fly    67 LNLLQHSLHRSSYLGKLIALIAPNRRRKNGGFSKFEFILCYSPVNPVLKKLVEEAW-QSLGKNKI 130
            :|.::|      .:.:|...|.|          ...|:|.|||.:.:.::::..|. |.|....|
Mosquito    64 INTVRH------MMPELNPNITP----------PITFMLAYSPQSALTERIMRRAVDQILEPIDI 112

  Fly   131 CESENATQLELDTVSKN-AFAGVQFDDAWANLTENDPLPNDFHFALRFPAELRTA----TIAIAN 190
            ...||..::| |....| :.|||:|.:.:.:|   |.|||:...|||||.|:||.    |...||
Mosquito   113 AGFENTQRME-DFFRLNYSLAGVEFPENYKDL---DTLPNNVTVALRFPGEMRTLQDDFTAFWAN 173

  Fly   191 TWLTMRLFPTIDLTGPRNEGDDDGGIPPGYLREGFLPLQHSLSMAYLRQKSGEQDLPNVVMKRYP 255
             |.|..:||...:.|.|....||.|.|..|..|.|:.:|.::|.|.:.::.....||::.:.|:|
Mosquito   174 -WATELMFPAFQIAGARERERDDAGYPANYYNESFIAVQSAVSRAIILERDASFALPDIYLNRFP 237

  Fly   256 FPAYIFDPLLEGMSSIMSLIILLSFIYPCTYITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVK 320
            :|.|..||||.|..:::.|||:::|.|......||||.||||||||.||||||.:||||:|||||
Mosquito   238 YPPYYSDPLLTGFENLLPLIIVIAFFYTAINTVKYITVEKEKQLKETMKIMGLPSWLHWSAWFVK 302

  Fly   321 SFIMLTISAILIAIL--VKINWSEDVAVLTHANFTALVFFLIIYIVSSICFCFMMATFFSRASTA 383
            ..::|.:|..||.:|  |.|..:.|:|:..:|.:|.:.|:|.::.:::||:|||::||||:|:.|
Mosquito   303 CLLLLIVSISLIVVLLCVNITTNTDLAIFEYAEWTVVWFYLFVFSITTICYCFMVSTFFSKANIA 367

  Fly   384 AAVTGLIWFIAYIPYSFTINSYDDLSLSSKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFT 448
            |.:.||:|||..:||:....:|||::..:|....|.||:||.||..|::..|||..||||||.|.
Mosquito   368 AGIAGLLWFILIVPYNIAFANYDDMTAGAKTALCLFSNSAMSFGFMLMMRHEGTATGLQWSNLFE 432

  Fly   449 PVSVDDTLTLGAVMIMMLVSCVIYMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGE---REYTG 510
            ||||||..::|..|:|:||..:||:.|.||||:|.||.||:..||.|.:|::|||.|   ::...
Mosquito   433 PVSVDDDFSVGDTMVMLLVDAIIYLSIALYVEKVFPGEFGIAEPWYFLYTKKFWCKETQQKQEPA 497

  Fly   511 VEDIPNGHVEQRDPKAFETEPEGKHIGLQMRHLKKRF-GNKMVVKGLSMNMFEDEITVLLGHNGA 574
            |.|..|.:...     .|.||:||:.|::::.|:|.| .||:.|:||.:||:||:||||||||||
Mosquito   498 VLDFSNYNTPN-----IEREPDGKYAGIKIKKLRKEFQKNKVAVQGLDLNMYEDQITVLLGHNGA 557

  Fly   575 GKTTTISMLTGMFPPTSGTAIINGSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKG 639
            |||||:|||||||.|:||||::||.|||.||:..|.|||:||||||||:||:|:.||.||:|:||
Mosquito   558 GKTTTMSMLTGMFSPSSGTALVNGYDIRNNIDAVRGSLGLCPQHNVLFNEMTVAEHIEFFARLKG 622

  Fly   640 LRGKAVEQEVAKYLKMIELEDKANVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSAR 704
            :....::.|:..|::::|||||.|..|..|||||||||||..||||.:||||||||:||||||||
Mosquito   623 VPRSKIKDEIRHYVQLLELEDKLNKQSHTLSGGMKRKLSVGIALCGGSKVVLCDEPTSGMDPSAR 687

  Fly   705 RQLWDLLQQEKVGRTLLLTTHFMDEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKR 769
            |.|||||.:||.|||:||:||||||||:||||||||.:||||..|:||||||::|.||||||||.
Mosquito   688 RALWDLLIKEKQGRTILLSTHFMDEADILGDRIAIMAEGELKACGSSFFLKKRFGVGYRLICVKG 752

  Fly   770 DDCETNEVTALLNKYIPGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGIT 834
            .:|:...:|.:|.::||.:..:.|||:||||.|.:..:|.|:::...||:..::..:..||:.:|
Mosquito   753 ANCDRARLTGILRQHIPNINIDTDIGSELSYVLNEDYTAVFQDLLRDLEDNVEQCGITSYGISLT 817

  Fly   835 SMEEVFMKVGAEKDNTGNIKDQHEIMNGGSGFRGEDDNESVQSDGI-------------FSENRR 886
            ::||||::||::    ....||.         :|..|:|...|:|:             .|:.:.
Mosquito   818 TLEEVFLRVGSD----SYALDQK---------KGSSDSEQDSSNGLDSSYGSSTVTMNQTSDTQP 869

  Fly   887 LLQGLQLLSNQWKAMLLKKFLYTWRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLT 951
            ||.|..|:.||..|||||||:.|.|:.:.:|:|.::|::||:||::|::|.....:|..|.|::.
Mosquito   870 LLGGSSLMWNQLFAMLLKKFISTKRSWVQMLVQALIPIYFVIVTVIIVRTFPGQTDLPAIPINVY 934

  Fly   952 QYPLAVTVLDRSNVQNGTGYEIANKYEDLARSYGSNYGLELTGTQGFEDYILDLGKTIQVRINSR 1016
            .|....|:|..|    ..|....:.:..|..::.|.:.|.:| .:...|||||:.......:|..
Mosquito   935 NYSTTTTILQAS----APGSPFVDGFRSLFEAFPSTHQLRIT-DKDMVDYILDVSTENIGLVNRE 994

  Fly  1017 YLVAATITESKITAWLNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLLSQLS 1081
            ::.||:||.:..|.|.|....|||||.:|.::|||. |....:.:|.:.|.|||:...|..:||.
Mosquito   995 FMAAASITNTNHTIWWNPTGFHTAPLALNFMYNAII-KSINKNFEITIINKPLPFKAETRFTQLQ 1058

  Fly  1082 TGNNLGTQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVT 1146
            .|||||.|::.|..|.|.|::::||:|.||||.|||||||||.|:.|:|||:..|:.||.:|::|
Mosquito  1059 AGNNLGFQISFNTGFAMSFIAALYIMFYIKERTSRAKLLQFVSGINVFTFWIVSFVWDFVTYVIT 1123

  Fly  1147 ALIVVITIVCFQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNIFCG 1211
            |||.:.|:..|||.|.|:|.||||.:|:|::||.|.||..|:.|.:|..|||||.::.|||||.|
Mosquito  1124 ALIYIATLAAFQEDGWSSFEELGRVFLVLIVFGIAFLPVTYLFSFWFEVPATGFVKMMIVNIFSG 1188

  Fly  1212 MALFIVVVVMSSELFDTKDTADILGWIFRIFPHFSLAMSLNKVYTNTATRNACAK------AGAL 1270
            ...|..|.::..:.||.||.|:.|.|.|.|||.|||:.||:.:...:.|.:.|.:      |...
Mosquito  1189 TIFFTAVFLLKFDGFDLKDVANGLEWAFMIFPLFSLSQSLSNINVLSTTASVCLEQCTEETASLC 1253

  Fly  1271 PPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGVVFFLIIIVLEFRLINELMFKIRQLISK 1335
            ....||.|:||||:.. .|:||..|:..:.:||...|:|.|||::.:|||::..|| |.|:..|.
Mosquito  1254 SQEYLCSLLPQCCDTN-IFSWESTGINRQLMYMGGVGLVGFLILMGIEFRVVERLM-KRRKRSSG 1316

  Fly  1336 PPPP-----PTEGQLDDDVANERERILQMSSNELATKNLVLDRVTKYYGQFMAVNQVSLCVQEVE 1395
            ...|     ||:   ||||..|:.|:..:|..|||.||||...:|||||:|:||||:|:.|:..|
Mosquito  1317 AITPAGSEDPTQ---DDDVLEEKRRVKSLSDGELANKNLVASDLTKYYGKFLAVNQLSVSVEGSE 1378

  Fly  1396 CFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFDALLDDLTGRE 1460
            |||||||||||||:||||:||||.||:|.|:|:|:||:||:|.::|:|||||||||||:||||||
Mosquito  1379 CFGLLGVNGAGKTSTFKMLTGDENISAGEAWVKGISLKSNLNQVHKVIGYCPQFDALLEDLTGRE 1443

  Fly  1461 VLRIFCMLRGVQESRIRQLSEDLAKSFGFMKHIDKQTHAYSGGNKRKLSTAIAVIGSPSVIYLDE 1525
            .::||.:|||:.:..|...:..||:...|||||||:...||||||||||||:|::.:|:|:||||
Mosquito  1444 TMKIFALLRGIPKQEIALETVRLAEELNFMKHIDKRVKEYSGGNKRKLSTALALLANPAVVYLDE 1508

  Fly  1526 PTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKF 1590
            |||||||.|:|.|||::..::.:||||||||||||||||||||||||||||||||||||||||||
Mosquito  1509 PTTGMDPGAKRHLWNVIINVKKAGKSIVLTSHSMEECEALCTRLAIMVNGEFKCIGSTQHLKNKF 1573

  Fly  1591 SKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDIDAVKEFVETEYPNSILQEEYQ 1655
            |||..|.||:.|..:.                       |..:.:.|::||...:..::|:|||.
Mosquito  1574 SKGYFLTIKLNRTGDG-----------------------STANAEPVRQFVAQNFAQAVLKEEYH 1615

  Fly  1656 GILTFYIPLTGVKWSRIFGLMESNRDQLNVEDYSVSQTTLEEIFLEFAKYQR 1707
            ..||::|..:.:|||.:|||||..:..|::|||::.||:||::||.|.||||
Mosquito  1616 DSLTYHITQSELKWSSMFGLMEEAKRTLDIEDYALGQTSLEQVFLFFTKYQR 1667

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 761/1606 (47%)
LOC4577893XP_061509472.1 None

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