DRSC/TRiP Functional Genomics Resources

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back to: DIOPT - Ortholog Prediction Tool / DIOPT for Diseases and Traits


Protein Alignment Abca3 and Eato

DIOPT Version :10

Sequence 1:NP_608445.2 Gene:Abca3 / 33103 FlyBaseID:FBgn0031170 Length:1714 Species:Drosophila melanogaster
Sequence 2:NP_001036360.1 Gene:Eato / 34783 FlyBaseID:FBgn0028539 Length:1597 Species:Drosophila melanogaster


Alignment Length:1774 Identity:462/1774 - (26%)
Similarity:789/1774 - (44%) Gaps:325/1774 - (18%)


- Green bases have known domain annotations that are detailed below.


  Fly    59 YNEQNLTDLNLLQHSLHRSSYLGKLIAL----IAPNRRRKNGGFSKFEFIL-------------C 106
            |.::||..|.|:     .|.:.|.|.|.    :.|...:.|...:|.|.:|             .
  Fly    19 YLQRNLLPLLLI-----CSGFAGVLTAYLHWSVKPVLHQINQFEAKNEMVLRELYFPGNELDYIY 78

  Fly   107 YSPVNPVLKKLVEEAWQSLG--KNKICESENA--TQLELDTVSKNAFAGVQFDDAWANLTENDPL 167
            |||::|.::.:::.....||  ..::..:.|:  .|||::...:.:...:.|     :...|...
  Fly    79 YSPISPNVEDIMDLLRVDLGIIPERLRPNNNSFEMQLEMEQQCRGSCFAIDF-----HRVPNRGS 138

  Fly   168 PNDFHFALRFPAELRTATIAIANTWLTMRLFPTIDLTGPR---NEGDDDGGIPPGYLREGFLPLQ 229
            ...|.::|.            :|   .||:.|........   ::.|||     .|:|.|||.||
  Fly   139 DRKFRYSLS------------SN---QMRISPRKRFVNDEEIYHQIDDD-----DYIRSGFLSLQ 183

  Fly   230 HSLSMAYLRQKSGEQDLPNVVMKRYPFPAYI---------FDPLLEGMSSIMSLIILLSFIYPCT 285
            |.|...|::.:...:|. .||:...|....|         |..|   .|.:.::::|.||:.|  
  Fly   184 HILDKQYMKYQELGKDF-EVVVSSMPNMEVISMDSHRLTYFGTL---CSILFNVVLLSSFVVP-- 242

  Fly   286 YITKYITAEKEKQLKEVMKIMGLSNWLHWTAWFVKSFI---MLTISAILIAILVKINWSEDVAVL 347
                 ...||:..|||.:.::...::|:...:|:..|:   :|.|..:::|.|.|        .|
  Fly   243 -----FVEEKQNGLKEFLNLVTPMSFLNGLTFFLIRFVCYTLLMIFVLVVAYLYK--------AL 294

  Fly   348 THANFTALVFFLIIYIVSSICFCFMMATFFSRASTAAAVTGLIWFIAYIPYSFT-INSYDDLSLS 411
            ....|..:....::||:|::.:.::::..| .:...|.:.||...|  |||:|: :.|:     :
  Fly   295 GSICFAYVAVLFLLYILSTMSYAYLISICF-HSVFYAKIGGLAMLI--IPYAFSFVRSW-----A 351

  Fly   412 SKLGWSLISNTAMGFGIKLILGFEGTGEGLQWSNFFTPVSV-----DDTLTLGAVMIMMLVSCVI 471
            :.|.:...|......|:.:...|....:..:    |..|.|     .::.|:.:|.::::....:
  Fly   352 TSLAFVCFSTNTFLEGLDIFQTFSNKRKNRE----FGAVDVFRVIKSNSSTMFSVYVVLVFQSFL 412

  Fly   472 YMIICLYVEQVMPGSFGVPRPWNFPFTREFWCGEREYTGVEDIPNGHVEQRDPKAFETEPEGKHI 536
            |.::..|:..|.||..|:.||      ..|:...:.|.           :|....:.|.|.|.| 
  Fly   413 YAMLYNYLGCVFPGPGGLKRP------MFFFLDPKTYM-----------KRQRNEYTTTPRGTH- 459

  Fly   537 GLQMRHLKKRF----GNKMVVKGLSMNMFEDEITVLLGHNGAGKTTTISMLTGMFPPTSGTAIIN 597
            .:.:..|.|:|    .:.::...|:|.:...|||||||||||||||.::|:.|:.|..||..|:.
  Fly   460 AIIITELCKKFQTSKRDTLISDNLNMTINNKEITVLLGHNGAGKTTMMNMIMGLVPKDSGKIIVC 524

  Fly   598 GSDIRTNIEGARMSLGICPQHNVLFDEMSVSNHIRFFSRMKGLRGKAVEQEVAKYLKMIELEDKA 662
            .   ..::...|..:|.||||:|....|:...|:.||::::|...........:.||.:.|.||.
  Fly   525 S---ERDVASYRHLIGFCPQHSVFMSYMTCHQHLEFFAQLRGACRSDARDWADEKLKKLGLSDKR 586

  Fly   663 NVASSKLSGGMKRKLSVCCALCGDTKVVLCDEPSSGMDPSARRQLWDLLQQEKVGRTLLLTTHFM 727
            |.....|||||||:||:..|:.|:||:|:.||||||:|.::||:|||:|...:..:.:|:|||:|
  Fly   587 NEFGKNLSGGMKRRLSLGIAIAGNTKIVILDEPSSGLDINSRRELWDILLNLRKEKAVLVTTHYM 651

  Fly   728 DEADVLGDRIAIMCDGELKCQGTSFFLKKQYGSGYRLICVKRDDCETNEVTA-------LLNKYI 785
            :||:||||.|.|:.:|:|:..|:...||::.|.||||      ..|.|:.|:       :::.::
  Fly   652 EEAEVLGDTICILANGKLQSIGSPLELKRKSGIGYRL------KLEINDFTSREVEIMEIIHHFV 710

  Fly   786 PGLKPECDIGAELSYQLPDSASAKFEEMFGQLEEQSDELHLNGYGVGITSMEEVFMKVGAEKDNT 850
            |..:....:...:...||.:....|.:|..:||.:|.||.::...:..||:|:||::...|:|..
  Fly   711 PTARVLNVVNPTVYICLPYAYKNCFAQMLYRLETESKELGIHTISMTDTSLEDVFLRCAGEQDQV 775

  Fly   851 GNIKDQHEIMNGGSGFRGEDDNESVQSDGIFSENRRLLQ------GLQLLSNQWKAMLLKKFLYT 909
                               |..:..::|.....:.:.||      ||..|   |.|:..||:.:.
  Fly   776 -------------------DTPDGSRNDAPLLAHYKRLQDHPPHRGLFQL---WMAVFYKKWTFI 818

  Fly   910 WRNKLLLLIQNIMPVFFVVVTILIIKTQGTFQELKPITISLTQYPLAVTVLDRSNVQNGTGYEIA 974
            ....|..||...:|...|...||::......:..:.:.:.|:|....|..     |.|.||:. |
  Fly   819 SNEWLYTLIMLCIPFVCVFGAILVMHAMSLVENEEALPLKLSQMGSGVIY-----VHNPTGHH-A 877

  Fly   975 NKYEDLARSYGSN----YGLELTGTQGFEDYILDLGK------------TIQVRINSRYLVAATI 1023
            :..:.|.:....|    ..:.|.|:...::..|||.:            .|.:....|    .|.
  Fly   878 HLEQQLRQQIELNGITAKTMHLRGSNDVKNESLDLQRDNLADFLEQVIGIIDMYGGGR----GTS 938

  Fly  1024 TESKITAWLNNQALHTAPLTVNMVHNAIADKLFGSSVKIQVTNAPLPYTTSTLL-SQLSTGNNLG 1087
            ....|..:.:....|::...:|:|.:|:. ||.....:|..|..|:....|.:. |:|.      
  Fly   939 DTPTIEIFYSGNRYHSSVELINLVDSAML-KLGRPESEIDTTYVPIRRFVSDISPSRLE------ 996

  Fly  1088 TQLASNLCFCMCFVSSIYILFLIKERESRAKLLQFVGGVKVWTFWLSQFICDFASYIVTALIVVI 1152
             ..|..:...|.|....:|....:|..:..|.||.:..   :|:|.:.|..|         ::::
  Fly   997 -YYAVIVPIGMFFFMFYFISLPFREYANGFKQLQTMSR---FTYWFAHFTFD---------MLIL 1048

  Fly  1153 TIVC---------FQETGLSTFGELGRYYLLLLLFGFAVLPFIYIMSLFFREPATGFARVSIVNI 1208
            ..||         ...:.|.|..||....|.:..:|.:.||.:|.:       ...|..:|.::.
  Fly  1049 IFVCVALFSLQSLMMPSELYTTAELKVIVLSIFFYGCSYLPILYAL-------GNNFKSISTIST 1106

  Fly  1209 FCGMALFIVVV---VMSS-----ELFDTKDTADILGWIFRIF-PHFSLAMSLNKVYTNTATRNAC 1264
            :..:.|.:..:   :.||     :|.:||..       |..| |.|:|......:..|..||.  
  Fly  1107 YLLLMLIVSAIAPLITSSNAAAMKLHETKIA-------FLCFLPDFNLNHQFRIINENFITRR-- 1162

  Fly  1265 AKAGALPPILLCELVPQCCNLKPYFAWEEPGVLPETVYMAVTGV-VFFLIIIVLEFRLIN----- 1323
                  .|.|:..|:.|    ..:||           |....|| |.....||||.:.:.     
  Fly  1163 ------HPALIKGLISQ----DTFFA-----------YATAVGVMVMAFFTIVLEHKYLRRRIHD 1206

  Fly  1324 ---ELMFKIRQLISKPPPPPTEGQLDDDVANERERILQMSSNELATKNLVLDRVTKYYGQFMAVN 1385
               |..|:.::..|....|.|.....||.|.|.:|:..:..:.|...:|::..:.|.||..:||:
  Fly  1207 GIWEWAFQRKKYNSTGTLPSTPISEIDDCAREEKRVTDLIKDPLNDHSLIVHNLRKRYGDKLAVD 1271

  Fly  1386 QVSLCVQEVECFGLLGVNGAGKTTTFKMMTGDERISSGAAYVQGLSLESNMNSIYKMIGYCPQFD 1450
            .||....:.||||||||||||||:||:|:..:..:..|...::|..:..:.....:..|||||:|
  Fly  1272 GVSFAAAQGECFGLLGVNGAGKTSTFQMIAANLPLDGGTIRIKGADIREHELKYREYFGYCPQYD 1336

  Fly  1451 ALLDDLTGREVLRIFCMLRGVQESRIRQLSEDLAKSFGFMK------HIDK----QTHAYSGGNK 1505
            ||...:|..:.|....:|||:.    |:.::..|.....:|      |:.|    |...||||.|
  Fly  1337 ALNKFMTAEQCLYYMALLRGLS----RRRTDGPASCKEHVKYWLEKMHLTKYQKVQVRHYSGGTK 1397

  Fly  1506 RKLSTAIAVIGSPSVIYLDEPTTGMDPAARRQLWNMVCRIRDSGKSIVLTSHSMEECEALCTRLA 1570
            |||..|:|:||:|:::.|||||||:||.:||.||..:...:...:::|||||||:|||.||.|||
  Fly  1398 RKLLAAMAMIGAPALVLLDEPTTGVDPISRRFLWQCIKDFQGKDRTVVLTSHSMDECEELCNRLA 1462

  Fly  1571 IMVNGEFKCIGSTQHLKNKFSKGLILKIKVRRNLEALRQARLSGGYARNPDEQTVPAQMSQRDID 1635
            ||.:|:|||:.:...||.  ..|..:|:|::.:.|                        ::.::.
  Fly  1463 IMAHGKFKCLNNICALKR--LSGFTIKLKMKADTE------------------------TEMNVS 1501

  Fly  1636 AVKEFVETEYPNSILQEEYQGILTFYIPL--TGVKWSRIFGLMESN-RDQLN--VEDYSVSQTTL 1695
            .:...:::|:|...|:|.:.|.||:::..  :.|.||.:|.:.|.. .|:|:  |.||||::.||
  Fly  1502 TITGTLKSEFPGLELRESHAGTLTYFVSTQESVVLWSSVFKIAEEYLGDRLSALVADYSVNECTL 1566

  Fly  1696 EEIFLEFAKYQREDTRANQ 1714
            |:|||:|.:..:..:.:.|
  Fly  1567 EDIFLKFEREAKSQSTSRQ 1585

Known Domains:


Indicated by green bases in alignment.

GeneSequenceDomainRegion External IDIdentity
Abca3NP_608445.2 rim_protein <137..1708 CDD:130324 440/1667 (26%)
EatoNP_001036360.1 rim_protein <169..1591 CDD:130324 430/1599 (27%)

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